RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 EIF5P55010 431 aaKnown RBP16.41■□□□□ 0.22
SMARCD2-209ENST00000581832 TEX13AQ9BXU3 409 aaPredicted RBP16.41■□□□□ 0.22
SMARCD2-209ENST00000581832 ADAMTS8Q9UP79 889 aa16.41■□□□□ 0.22
SMARCD2-209ENST00000581832 KDM3BQ7LBC6 1761 aa16.41■□□□□ 0.22
SMARCD2-209ENST00000581832 PRAMEF22A3QJZ6 481 aa16.4■□□□□ 0.22
SMARCD2-209ENST00000581832 STARD3NLO95772 234 aa16.4■□□□□ 0.22
SMARCD2-209ENST00000581832 TMPOP42166 694 aaKnown RBP16.4■□□□□ 0.22
SMARCD2-209ENST00000581832 KLHL34Q8N239 644 aa16.4■□□□□ 0.22
SMARCD2-209ENST00000581832 THUMPD2Q9BTF0 503 aaKnown RBP16.4■□□□□ 0.22
SMARCD2-209ENST00000581832 MIS18AQ9NYP9 233 aa16.4■□□□□ 0.22
SMARCD2-209ENST00000581832 USP16Q9Y5T5 823 aa16.4■□□□□ 0.22
SMARCD2-209ENST00000581832 FKBP8Q14318 412 aa16.39■□□□□ 0.21
SMARCD2-209ENST00000581832 BCL2L12Q9HB09 334 aa16.39■□□□□ 0.21
SMARCD2-209ENST00000581832 MAPK8IP3Q9UPT6 1336 aa16.39■□□□□ 0.21
SMARCD2-209ENST00000581832 COL15A1P39059 1388 aa16.38■□□□□ 0.21
SMARCD2-209ENST00000581832 TM4SF1P30408 202 aa16.38■□□□□ 0.21
SMARCD2-209ENST00000581832 RIPK4P57078 832 aa16.38■□□□□ 0.21
SMARCD2-209ENST00000581832 CCDC184Q52MB2 194 aa16.38■□□□□ 0.21
SMARCD2-209ENST00000581832 NARFQ9UHQ1 456 aa16.38■□□□□ 0.21
SMARCD2-209ENST00000581832 CHD4Q14839 1912 aa16.38■□□□□ 0.21
SMARCD2-209ENST00000581832 KIAA1551Q9HCM1 1747 aa16.38■□□□□ 0.21
SMARCD2-209ENST00000581832 A1BGP04217 495 aa16.37■□□□□ 0.21
SMARCD2-209ENST00000581832 CANXP27824 592 aaKnown RBP16.37■□□□□ 0.21
SMARCD2-209ENST00000581832 USPL1Q5W0Q7 1092 aa16.37■□□□□ 0.21
SMARCD2-209ENST00000581832 CCDC146Q8IYE0 955 aa16.37■□□□□ 0.21
SMARCD2-209ENST00000581832 RUNDC1Q96C34 613 aa16.37■□□□□ 0.21
SMARCD2-209ENST00000581832 SNRPA1P09661 255 aaKnown RBP16.36■□□□□ 0.21
SMARCD2-209ENST00000581832 IL6STP40189 918 aaPredicted RBP16.36■□□□□ 0.21
SMARCD2-209ENST00000581832 DDR1Q08345 913 aa16.36■□□□□ 0.21
SMARCD2-209ENST00000581832 DCAF8L1A6NGE4 600 aa16.35■□□□□ 0.21
SMARCD2-209ENST00000581832 ZPR1O75312 459 aa16.35■□□□□ 0.21
SMARCD2-209ENST00000581832 YBX3P16989 372 aaKnown RBP eCLIP16.35■□□□□ 0.21
SMARCD2-209ENST00000581832 EIF4A1P60842 406 aaKnown RBP16.35■□□□□ 0.21
SMARCD2-209ENST00000581832 WDR43Q15061 677 aaKnown RBP eCLIP16.35■□□□□ 0.21
SMARCD2-209ENST00000581832 PNISRQ8TF01 805 aaKnown RBP16.35■□□□□ 0.21
SMARCD2-209ENST00000581832 TRIM35Q9UPQ4 493 aa16.35■□□□□ 0.21
SMARCD2-209ENST00000581832 C10orf71Q711Q0 1435 aa16.35■□□□□ 0.21
SMARCD2-209ENST00000581832 AFDNP55196 1824 aaKnown RBP16.34■□□□□ 0.21
SMARCD2-209ENST00000581832 POLRMTO00411 1230 aaKnown RBP16.34■□□□□ 0.21
SMARCD2-209ENST00000581832 RRP7AQ9Y3A4 280 aaKnown RBP16.34■□□□□ 0.21
SMARCD2-209ENST00000581832 NRXN2Q9P2S2 1712 aa16.33■□□□□ 0.21
SMARCD2-209ENST00000581832 NBPF26B4DH59 902 aa16.33■□□□□ 0.2
SMARCD2-209ENST00000581832 GIGYF1O75420 1035 aaPredicted RBP16.33■□□□□ 0.2
SMARCD2-209ENST00000581832 GPR162Q16538 588 aa16.33■□□□□ 0.2
SMARCD2-209ENST00000581832 NBPF10Q6P3W6 841 aaKnown RBP16.33■□□□□ 0.2
SMARCD2-209ENST00000581832 NBPF15Q8N660 670 aa16.33■□□□□ 0.2
SMARCD2-209ENST00000581832 PARP3Q9Y6F1 533 aa16.33■□□□□ 0.2
SMARCD2-209ENST00000581832 N4BP2Q86UW6 1770 aaPredicted RBP16.33■□□□□ 0.2
SMARCD2-209ENST00000581832 PXDNLA1KZ92 1463 aa16.32■□□□□ 0.2
SMARCD2-209ENST00000581832 LAMB4A4D0S4 1761 aa16.32■□□□□ 0.2
SMARCD2-209ENST00000581832 BRCA1P38398 1863 aaKnown RBP16.32■□□□□ 0.2
SMARCD2-209ENST00000581832 PIP4K2AP48426 406 aaPredicted RBP16.32■□□□□ 0.2
SMARCD2-209ENST00000581832 NFIXQ14938 502 aa16.32■□□□□ 0.2
SMARCD2-209ENST00000581832 SCN7AQ01118 1682 aa16.31■□□□□ 0.2
SMARCD2-209ENST00000581832 A0A087WZG4 1122 aa16.31■□□□□ 0.2
SMARCD2-209ENST00000581832 TGFB2P61812 414 aa16.31■□□□□ 0.2
SMARCD2-209ENST00000581832 BABAM1Q9NWV8 329 aa16.31■□□□□ 0.2
SMARCD2-209ENST00000581832 TBC1D2BQ9UPU7 963 aa16.31■□□□□ 0.2
SMARCD2-209ENST00000581832 CAMTA2O94983 1202 aa16.3■□□□□ 0.2
SMARCD2-209ENST00000581832 KCNA3P22001 575 aa16.3■□□□□ 0.2
SMARCD2-209ENST00000581832 YY1P25490 414 aa16.3■□□□□ 0.2
SMARCD2-209ENST00000581832 LMOD3Q0VAK6 560 aa16.3■□□□□ 0.2
SMARCD2-209ENST00000581832 NEUROD2Q15784 382 aa16.3■□□□□ 0.2
SMARCD2-209ENST00000581832 BCORQ6W2J9 1755 aa16.3■□□□□ 0.2
SMARCD2-209ENST00000581832 CHL1O00533 1208 aa16.29■□□□□ 0.2
SMARCD2-209ENST00000581832 A0A0G2JLW4 131 aa16.28■□□□□ 0.2
SMARCD2-209ENST00000581832 TBC1D9BQ66K14 1250 aa16.28■□□□□ 0.2
SMARCD2-209ENST00000581832 PELP1Q8IZL8 1130 aaKnown RBP16.28■□□□□ 0.2
SMARCD2-209ENST00000581832 TSPYL4Q9UJ04 414 aa16.28■□□□□ 0.2
SMARCD2-209ENST00000581832 APAF1O14727 1248 aa16.27■□□□□ 0.2
SMARCD2-209ENST00000581832 GRIN3BO60391 1043 aa16.27■□□□□ 0.2
SMARCD2-209ENST00000581832 DPEP1P16444 411 aa16.27■□□□□ 0.2
SMARCD2-209ENST00000581832 DZIP3Q86Y13 1208 aaKnown RBP16.27■□□□□ 0.2
SMARCD2-209ENST00000581832 ZNF330Q9Y3S2 320 aaPredicted RBP16.27■□□□□ 0.2
SMARCD2-209ENST00000581832 ANP32CO43423 234 aa16.26■□□□□ 0.19
SMARCD2-209ENST00000581832 SERPINB2P05120 415 aa16.26■□□□□ 0.19
SMARCD2-209ENST00000581832 LRP10Q7Z4F1 713 aa16.26■□□□□ 0.19
SMARCD2-209ENST00000581832 PDIA6Q15084 440 aa16.25■□□□□ 0.19
SMARCD2-209ENST00000581832 CLEC4GQ6UXB4 293 aa16.25■□□□□ 0.19
SMARCD2-209ENST00000581832 WWC3Q9ULE0 1092 aa16.25■□□□□ 0.19
SMARCD2-209ENST00000581832 ANKRD31Q8N7Z5 1873 aa16.25■□□□□ 0.19
SMARCD2-209ENST00000581832 RGL2O15211 777 aa16.24■□□□□ 0.19
SMARCD2-209ENST00000581832 ZNF853P0CG23 659 aa16.24■□□□□ 0.19
SMARCD2-209ENST00000581832 BICDL1Q6ZP65 573 aa16.24■□□□□ 0.19
SMARCD2-209ENST00000581832 KRT24Q2M2I5 525 aa16.23■□□□□ 0.19
SMARCD2-209ENST00000581832 CFAP44Q96MT7 982 aa16.23■□□□□ 0.19
SMARCD2-209ENST00000581832 NUP98P52948 1817 aa16.23■□□□□ 0.19
SMARCD2-209ENST00000581832 ARFGEF1Q9Y6D6 1849 aa16.23■□□□□ 0.19
SMARCD2-209ENST00000581832 CARMIL3Q8ND23 1372 aa16.23■□□□□ 0.19
SMARCD2-209ENST00000581832 CHRNA5P30532 468 aa16.22■□□□□ 0.19
SMARCD2-209ENST00000581832 HLFQ16534 295 aa16.22■□□□□ 0.19
SMARCD2-209ENST00000581832 ERBB4Q15303 1308 aa16.21■□□□□ 0.19
SMARCD2-209ENST00000581832 DLEC1Q9Y238 1755 aa16.21■□□□□ 0.19
SMARCD2-209ENST00000581832 PRR5LQ6MZQ0 368 aa16.21■□□□□ 0.19
SMARCD2-209ENST00000581832 NPM2Q86SE8 214 aaKnown RBP16.21■□□□□ 0.19
SMARCD2-209ENST00000581832 MRS2Q9HD23 443 aa16.21■□□□□ 0.19
SMARCD2-209ENST00000581832 TTLL7Q6ZT98 887 aa16.2■□□□□ 0.18
SMARCD2-209ENST00000581832 SETDB2Q96T68 719 aa16.2■□□□□ 0.18
SMARCD2-209ENST00000581832 MBIPQ9NS73 344 aa16.2■□□□□ 0.18
SMARCD2-209ENST00000581832 ERVV-1B6SEH8 477 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms