RNA–Protein interactions for RNA: ENST00000578561.1

ERVFRD-3-201, Transcript of endogenous retrovirus group FRD member 3, humanhuman

BASIC

Gene ERVFRD-3, Length 1,617 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFRD-3-201ENST00000578561 CLUAP1Q96AJ1 413 aa6.81□□□□□ -1.32
ERVFRD-3-201ENST00000578561 PNNQ9H307 717 aaKnown RBP6.81□□□□□ -1.32
ERVFRD-3-201ENST00000578561 TSKSQ9UJT2 592 aa6.81□□□□□ -1.32
ERVFRD-3-201ENST00000578561 USP31Q70CQ4 1352 aa6.81□□□□□ -1.32
ERVFRD-3-201ENST00000578561 FER1L4A9Z1Z3 1794 aa6.81□□□□□ -1.32
ERVFRD-3-201ENST00000578561 GRXCR2A6NFK2 248 aa6.8□□□□□ -1.32
ERVFRD-3-201ENST00000578561 MYT1Q01538 1121 aa6.8□□□□□ -1.32
ERVFRD-3-201ENST00000578561 DIP2AQ14689 1571 aa6.8□□□□□ -1.32
ERVFRD-3-201ENST00000578561 PCDHB15Q9Y5E8 787 aa6.8□□□□□ -1.32
ERVFRD-3-201ENST00000578561 XRN1Q8IZH2 1706 aaKnown RBP6.8□□□□□ -1.32
ERVFRD-3-201ENST00000578561 ZNF853P0CG23 659 aa6.79□□□□□ -1.32
ERVFRD-3-201ENST00000578561 EIF4A2Q14240 407 aaKnown RBP6.79□□□□□ -1.32
ERVFRD-3-201ENST00000578561 MAP2P11137 1827 aaKnown RBP6.79□□□□□ -1.32
ERVFRD-3-201ENST00000578561 TRIM27P14373 513 aa6.79□□□□□ -1.32
ERVFRD-3-201ENST00000578561 KCNA6P17658 529 aa6.79□□□□□ -1.32
ERVFRD-3-201ENST00000578561 CANXP27824 592 aaKnown RBP6.79□□□□□ -1.32
ERVFRD-3-201ENST00000578561 AAMPQ13685 434 aa6.79□□□□□ -1.32
ERVFRD-3-201ENST00000578561 NBR1Q14596 966 aa6.79□□□□□ -1.32
ERVFRD-3-201ENST00000578561 C8orf34Q49A92 452 aa6.79□□□□□ -1.32
ERVFRD-3-201ENST00000578561 ZKSCAN2Q63HK3 967 aa6.79□□□□□ -1.32
ERVFRD-3-201ENST00000578561 THUMPD2Q9BTF0 503 aaKnown RBP6.79□□□□□ -1.32
ERVFRD-3-201ENST00000578561 ITSN1Q15811 1721 aa6.79□□□□□ -1.32
ERVFRD-3-201ENST00000578561 CEP170BQ9Y4F5 1589 aaPredicted RBP6.78□□□□□ -1.32
ERVFRD-3-201ENST00000578561 PIK3R4Q99570 1358 aa6.78□□□□□ -1.32
ERVFRD-3-201ENST00000578561 PEAK1Q9H792 1746 aa6.78□□□□□ -1.32
ERVFRD-3-201ENST00000578561 MVPQ14764 893 aaKnown RBP6.78□□□□□ -1.32
ERVFRD-3-201ENST00000578561 AEBP1Q8IUX7 1158 aa6.78□□□□□ -1.32
ERVFRD-3-201ENST00000578561 PMFBP1Q8TBY8 1022 aa6.78□□□□□ -1.32
ERVFRD-3-201ENST00000578561 IPO9Q96P70 1041 aaKnown RBP6.78□□□□□ -1.32
ERVFRD-3-201ENST00000578561 SMC4Q9NTJ3 1288 aa6.78□□□□□ -1.32
ERVFRD-3-201ENST00000578561 NALCNQ8IZF0 1738 aa6.77□□□□□ -1.33
ERVFRD-3-201ENST00000578561 TTC21AQ8NDW8 1320 aa6.77□□□□□ -1.33
ERVFRD-3-201ENST00000578561 NBPF26B4DH59 902 aa6.77□□□□□ -1.33
ERVFRD-3-201ENST00000578561 VAMP4O75379 141 aa6.77□□□□□ -1.33
ERVFRD-3-201ENST00000578561 MLLT3P42568 568 aaPredicted RBP6.77□□□□□ -1.33
ERVFRD-3-201ENST00000578561 BRPF1P55201 1214 aaPredicted RBP6.77□□□□□ -1.33
ERVFRD-3-201ENST00000578561 PRR20EP86478 221 aa6.77□□□□□ -1.33
ERVFRD-3-201ENST00000578561 PRR20CP86479 221 aa6.77□□□□□ -1.33
ERVFRD-3-201ENST00000578561 PRR20DP86480 221 aa6.77□□□□□ -1.33
ERVFRD-3-201ENST00000578561 PRR20BP86481 221 aa6.77□□□□□ -1.33
ERVFRD-3-201ENST00000578561 PRR20AP86496 221 aa6.77□□□□□ -1.33
ERVFRD-3-201ENST00000578561 HSP90AB2PQ58FF8 381 aa6.77□□□□□ -1.33
ERVFRD-3-201ENST00000578561 DZIP1LQ8IYY4 767 aaKnown RBP6.77□□□□□ -1.33
ERVFRD-3-201ENST00000578561 IFT57Q9NWB7 429 aa6.77□□□□□ -1.33
ERVFRD-3-201ENST00000578561 NOB1Q9ULX3 412 aaKnown RBP6.77□□□□□ -1.33
ERVFRD-3-201ENST00000578561 ANKARQ7Z5J8 1434 aa6.77□□□□□ -1.33
ERVFRD-3-201ENST00000578561 MAP3K19Q56UN5 1328 aa6.76□□□□□ -1.33
ERVFRD-3-201ENST00000578561 FAM83GA6ND36 823 aa6.76□□□□□ -1.33
ERVFRD-3-201ENST00000578561 SEMA3EO15041 775 aa6.76□□□□□ -1.33
ERVFRD-3-201ENST00000578561 ANP32AP39687 249 aaKnown RBP6.76□□□□□ -1.33
ERVFRD-3-201ENST00000578561 EN1Q05925 392 aaPredicted RBP6.76□□□□□ -1.33
ERVFRD-3-201ENST00000578561 FAM161AQ3B820 660 aa6.76□□□□□ -1.33
ERVFRD-3-201ENST00000578561 ALDH1L2Q3SY69 923 aa6.76□□□□□ -1.33
ERVFRD-3-201ENST00000578561 ATF7IPQ6VMQ6 1270 aa6.76□□□□□ -1.33
ERVFRD-3-201ENST00000578561 TSPYL6Q8N831 410 aa6.76□□□□□ -1.33
ERVFRD-3-201ENST00000578561 NKX2-3Q8TAU0 364 aa6.76□□□□□ -1.33
ERVFRD-3-201ENST00000578561 MBIPQ9NS73 344 aa6.76□□□□□ -1.33
ERVFRD-3-201ENST00000578561 STK17AQ9UEE5 414 aa6.76□□□□□ -1.33
ERVFRD-3-201ENST00000578561 NOP58Q9Y2X3 529 aaKnown RBP6.76□□□□□ -1.33
ERVFRD-3-201ENST00000578561 RGPD1P0DJD0 1748 aa6.76□□□□□ -1.33
ERVFRD-3-201ENST00000578561 MAP3K7O43318 606 aa6.76□□□□□ -1.33
ERVFRD-3-201ENST00000578561 SLC19A1P41440 591 aa6.76□□□□□ -1.33
ERVFRD-3-201ENST00000578561 PRIM1P49642 420 aaKnown RBP6.76□□□□□ -1.33
ERVFRD-3-201ENST00000578561 RGS3P49796 1198 aa6.76□□□□□ -1.33
ERVFRD-3-201ENST00000578561 GNAI1P63096 354 aa6.76□□□□□ -1.33
ERVFRD-3-201ENST00000578561 SULT6B1Q6IMI4 303 aa6.76□□□□□ -1.33
ERVFRD-3-201ENST00000578561 TRIM67Q6ZTA4 783 aa6.76□□□□□ -1.33
ERVFRD-3-201ENST00000578561 TMEM57Q8N5G2 664 aa6.76□□□□□ -1.33
ERVFRD-3-201ENST00000578561 CERKQ8TCT0 537 aa6.76□□□□□ -1.33
ERVFRD-3-201ENST00000578561 ZNF428Q96B54 188 aa6.76□□□□□ -1.33
ERVFRD-3-201ENST00000578561 ADAMTSL3P82987 1691 aa6.75□□□□□ -1.33
ERVFRD-3-201ENST00000578561 RIMS1Q86UR5 1692 aaKnown RBP6.75□□□□□ -1.33
ERVFRD-3-201ENST00000578561 RNF40O75150 1001 aa6.75□□□□□ -1.33
ERVFRD-3-201ENST00000578561 NEFMP07197 916 aa6.75□□□□□ -1.33
ERVFRD-3-201ENST00000578561 OSBPP22059 807 aa6.75□□□□□ -1.33
ERVFRD-3-201ENST00000578561 APLP1P51693 650 aa6.75□□□□□ -1.33
ERVFRD-3-201ENST00000578561 CALD1Q05682 793 aaKnown RBP6.75□□□□□ -1.33
ERVFRD-3-201ENST00000578561 DCTN1Q14203 1278 aa6.75□□□□□ -1.33
ERVFRD-3-201ENST00000578561 LCE2AQ5TA79 106 aaPredicted RBP6.75□□□□□ -1.33
ERVFRD-3-201ENST00000578561 C8orf58Q8NAV2 365 aa6.75□□□□□ -1.33
ERVFRD-3-201ENST00000578561 NGDNQ8NEJ9 315 aaKnown RBP6.75□□□□□ -1.33
ERVFRD-3-201ENST00000578561 PIK3C2AO00443 1686 aa6.74□□□□□ -1.33
ERVFRD-3-201ENST00000578561 KIF16BQ96L93 1317 aa6.74□□□□□ -1.33
ERVFRD-3-201ENST00000578561 POTECB2RU33 542 aa6.74□□□□□ -1.33
ERVFRD-3-201ENST00000578561 SMAPO00193 183 aa6.74□□□□□ -1.33
ERVFRD-3-201ENST00000578561 PRSS12P56730 875 aa6.74□□□□□ -1.33
ERVFRD-3-201ENST00000578561 LMOD3Q0VAK6 560 aa6.74□□□□□ -1.33
ERVFRD-3-201ENST00000578561 NPM2Q86SE8 214 aaKnown RBP6.74□□□□□ -1.33
ERVFRD-3-201ENST00000578561 ZNF598Q86UK7 904 aaKnown RBP6.74□□□□□ -1.33
ERVFRD-3-201ENST00000578561 ANKLE2Q86XL3 938 aa6.74□□□□□ -1.33
ERVFRD-3-201ENST00000578561 ZBTB40Q9NUA8 1239 aa6.74□□□□□ -1.33
ERVFRD-3-201ENST00000578561 LAS1LQ9Y4W2 734 aaKnown RBP6.74□□□□□ -1.33
ERVFRD-3-201ENST00000578561 SBNO1A3KN83 1393 aa6.74□□□□□ -1.33
ERVFRD-3-201ENST00000578561 ARHGEF10O15013 1369 aa6.74□□□□□ -1.33
ERVFRD-3-201ENST00000578561 KDRP35968 1356 aa6.74□□□□□ -1.33
ERVFRD-3-201ENST00000578561 USP19O94966 1318 aa6.73□□□□□ -1.33
ERVFRD-3-201ENST00000578561 IGSF1Q8N6C5 1336 aa6.73□□□□□ -1.33
ERVFRD-3-201ENST00000578561 FMN2Q9NZ56 1722 aa6.73□□□□□ -1.33
ERVFRD-3-201ENST00000578561 CRB1P82279 1406 aa6.73□□□□□ -1.33
ERVFRD-3-201ENST00000578561 CHL1O00533 1208 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms