RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 AK7Q96M32 723 aa20.14■□□□□ 0.81
IFT20-206ENST00000578122 MYH14Q7Z406 1995 aaKnown RBP20.14■□□□□ 0.81
IFT20-206ENST00000578122 BABAM1Q9NWV8 329 aa20.13■□□□□ 0.81
IFT20-206ENST00000578122 TSPYL4Q9UJ04 414 aa20.13■□□□□ 0.81
IFT20-206ENST00000578122 UBR3Q6ZT12 1888 aa20.13■□□□□ 0.81
IFT20-206ENST00000578122 CALD1Q05682 793 aaKnown RBP20.12■□□□□ 0.81
IFT20-206ENST00000578122 CCDC27Q2M243 656 aa20.12■□□□□ 0.81
IFT20-206ENST00000578122 RC3H1Q5TC82 1133 aaKnown RBP20.12■□□□□ 0.81
IFT20-206ENST00000578122 LAS1LQ9Y4W2 734 aaKnown RBP20.12■□□□□ 0.81
IFT20-206ENST00000578122 CNTNAP4Q9C0A0 1308 aa20.11■□□□□ 0.81
IFT20-206ENST00000578122 SALL2Q9Y467 1007 aaPredicted RBP20.11■□□□□ 0.81
IFT20-206ENST00000578122 CASZ1Q86V15 1759 aa20.11■□□□□ 0.81
IFT20-206ENST00000578122 CHL1O00533 1208 aa20.1■□□□□ 0.81
IFT20-206ENST00000578122 GNPATO15228 680 aa20.1■□□□□ 0.81
IFT20-206ENST00000578122 CYP19A1P11511 503 aaPredicted RBP20.1■□□□□ 0.81
IFT20-206ENST00000578122 CRKLP46109 303 aaKnown RBP20.1■□□□□ 0.81
IFT20-206ENST00000578122 WWC1Q8IX03 1113 aa20.1■□□□□ 0.81
IFT20-206ENST00000578122 TEX13AQ9BXU3 409 aaPredicted RBP20.1■□□□□ 0.81
IFT20-206ENST00000578122 PNPLA7Q6ZV29 1317 aa20.09■□□□□ 0.81
IFT20-206ENST00000578122 STARD3NLO95772 234 aa20.09■□□□□ 0.81
IFT20-206ENST00000578122 SNRPA1P09661 255 aaKnown RBP20.09■□□□□ 0.81
IFT20-206ENST00000578122 EIF4A1P60842 406 aaKnown RBP20.09■□□□□ 0.81
IFT20-206ENST00000578122 NGEFQ8N5V2 710 aa20.09■□□□□ 0.81
IFT20-206ENST00000578122 PDGFDQ9GZP0 370 aaPredicted RBP20.09■□□□□ 0.81
IFT20-206ENST00000578122 FLAD1Q8NFF5 587 aa20.08■□□□□ 0.81
IFT20-206ENST00000578122 CFAP44Q96MT7 982 aa20.08■□□□□ 0.81
IFT20-206ENST00000578122 CCDC87Q9NVE4 849 aa20.08■□□□□ 0.81
IFT20-206ENST00000578122 RPS6KA4O75676 772 aa20.07■□□□□ 0.8
IFT20-206ENST00000578122 INTS5Q6P9B9 1019 aaKnown RBP20.07■□□□□ 0.8
IFT20-206ENST00000578122 SMIM5Q71RC9 77 aa20.07■□□□□ 0.8
IFT20-206ENST00000578122 COL23A1Q86Y22 540 aaPredicted RBP20.07■□□□□ 0.8
IFT20-206ENST00000578122 IFT57Q9NWB7 429 aa20.07■□□□□ 0.8
IFT20-206ENST00000578122 RTCBQ9Y3I0 505 aaKnown RBP20.07■□□□□ 0.8
IFT20-206ENST00000578122 PHF14O94880 888 aa20.06■□□□□ 0.8
IFT20-206ENST00000578122 ZNF853P0CG23 659 aa20.06■□□□□ 0.8
IFT20-206ENST00000578122 SSFA2P28290 1259 aa20.06■□□□□ 0.8
IFT20-206ENST00000578122 GNAI1P63096 354 aa20.06■□□□□ 0.8
IFT20-206ENST00000578122 AMIGO3Q86WK7 504 aa20.06■□□□□ 0.8
IFT20-206ENST00000578122 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.05■□□□□ 0.8
IFT20-206ENST00000578122 PRAMEF22A3QJZ6 481 aa20.05■□□□□ 0.8
IFT20-206ENST00000578122 USP16Q9Y5T5 823 aa20.05■□□□□ 0.8
IFT20-206ENST00000578122 LAMB4A4D0S4 1761 aa20.04■□□□□ 0.8
IFT20-206ENST00000578122 GIGYF1O75420 1035 aaPredicted RBP20.04■□□□□ 0.8
IFT20-206ENST00000578122 IL16Q14005 1332 aa20.03■□□□□ 0.8
IFT20-206ENST00000578122 ZBTB7AO95365 584 aa20.03■□□□□ 0.8
IFT20-206ENST00000578122 A1BGP04217 495 aa20.03■□□□□ 0.8
IFT20-206ENST00000578122 TRAPPC3LQ5T215 181 aa20.03■□□□□ 0.8
IFT20-206ENST00000578122 WDR63Q8IWG1 891 aa20.03■□□□□ 0.8
IFT20-206ENST00000578122 MBIPQ9NS73 344 aa20.03■□□□□ 0.8
IFT20-206ENST00000578122 ZBTB1Q9Y2K1 713 aa20.03■□□□□ 0.8
IFT20-206ENST00000578122 CANXP27824 592 aaKnown RBP20.02■□□□□ 0.8
IFT20-206ENST00000578122 SLC16A10Q8TF71 515 aa20.02■□□□□ 0.8
IFT20-206ENST00000578122 SOS1Q07889 1333 aaPredicted RBP20.02■□□□□ 0.79
IFT20-206ENST00000578122 MTFR1LQ9H019 292 aa20.01■□□□□ 0.79
IFT20-206ENST00000578122 ARHGEF1Q92888 912 aaKnown RBP20■□□□□ 0.79
IFT20-206ENST00000578122 SPON1Q9HCB6 807 aa20■□□□□ 0.79
IFT20-206ENST00000578122 C4AP0C0L4 1744 aa19.99■□□□□ 0.79
IFT20-206ENST00000578122 RFC4P35249 363 aa19.99■□□□□ 0.79
IFT20-206ENST00000578122 KRT24Q2M2I5 525 aa19.99■□□□□ 0.79
IFT20-206ENST00000578122 CHRDL2Q6WN34 429 aa19.99■□□□□ 0.79
IFT20-206ENST00000578122 PIP4K2AP48426 406 aaPredicted RBP19.97■□□□□ 0.79
IFT20-206ENST00000578122 EIF5P55010 431 aaKnown RBP19.97■□□□□ 0.79
IFT20-206ENST00000578122 TSR2Q969E8 191 aaKnown RBP19.97■□□□□ 0.79
IFT20-206ENST00000578122 LRP5O75197 1615 aa19.97■□□□□ 0.79
IFT20-206ENST00000578122 ZNF521Q96K83 1311 aa19.97■□□□□ 0.79
IFT20-206ENST00000578122 COL15A1P39059 1388 aa19.96■□□□□ 0.79
IFT20-206ENST00000578122 A0A087WZG4 1122 aa19.96■□□□□ 0.79
IFT20-206ENST00000578122 NBPF26B4DH59 902 aa19.96■□□□□ 0.79
IFT20-206ENST00000578122 EIF2S2P20042 333 aaKnown RBP19.96■□□□□ 0.79
IFT20-206ENST00000578122 IL6STP40189 918 aaPredicted RBP19.96■□□□□ 0.79
IFT20-206ENST00000578122 DUSP27Q5VZP5 1158 aa19.96■□□□□ 0.79
IFT20-206ENST00000578122 NBPF10Q6P3W6 841 aaKnown RBP19.96■□□□□ 0.79
IFT20-206ENST00000578122 NBPF15Q8N660 670 aa19.96■□□□□ 0.79
IFT20-206ENST00000578122 ZNF330Q9Y3S2 320 aaPredicted RBP19.96■□□□□ 0.79
IFT20-206ENST00000578122 COL24A1Q17RW2 1714 aa19.96■□□□□ 0.79
IFT20-206ENST00000578122 HOXB7P09629 217 aa19.95■□□□□ 0.78
IFT20-206ENST00000578122 MSL1Q68DK7 614 aa19.95■□□□□ 0.78
IFT20-206ENST00000578122 NPM2Q86SE8 214 aaKnown RBP19.95■□□□□ 0.78
IFT20-206ENST00000578122 SRP68Q9UHB9 627 aaKnown RBP19.94■□□□□ 0.78
IFT20-206ENST00000578122 ERBB4Q15303 1308 aa19.94■□□□□ 0.78
IFT20-206ENST00000578122 ELL2O00472 640 aaPredicted RBP19.93■□□□□ 0.78
IFT20-206ENST00000578122 ZPR1O75312 459 aa19.93■□□□□ 0.78
IFT20-206ENST00000578122 PTGER2P43116 358 aa19.93■□□□□ 0.78
IFT20-206ENST00000578122 C8orf58Q8NAV2 365 aa19.93■□□□□ 0.78
IFT20-206ENST00000578122 NECTIN2Q92692 538 aa19.93■□□□□ 0.78
IFT20-206ENST00000578122 MYH16Q9H6N6 1097 aa19.93■□□□□ 0.78
IFT20-206ENST00000578122 USP42Q9H9J4 1324 aaKnown RBP19.93■□□□□ 0.78
IFT20-206ENST00000578122 FANCIQ9NVI1 1328 aa19.93■□□□□ 0.78
IFT20-206ENST00000578122 GOLGA2Q08379 1002 aa19.92■□□□□ 0.78
IFT20-206ENST00000578122 ARXQ96QS3 562 aa19.92■□□□□ 0.78
IFT20-206ENST00000578122 NARFQ9UHQ1 456 aa19.92■□□□□ 0.78
IFT20-206ENST00000578122 GYS1P13807 737 aa19.91■□□□□ 0.78
IFT20-206ENST00000578122 POLD1P28340 1107 aa19.91■□□□□ 0.78
IFT20-206ENST00000578122 HDGFL1Q5TGJ6 251 aa19.91■□□□□ 0.78
IFT20-206ENST00000578122 SGIP1Q9BQI5 828 aa19.91■□□□□ 0.78
IFT20-206ENST00000578122 TBC1D2BQ9UPU7 963 aa19.91■□□□□ 0.78
IFT20-206ENST00000578122 MYL6BP14649 208 aa19.9■□□□□ 0.78
IFT20-206ENST00000578122 HNRNPUQ00839 825 aaKnown RBP eCLIP19.9■□□□□ 0.78
IFT20-206ENST00000578122 USPL1Q5W0Q7 1092 aa19.9■□□□□ 0.78
IFT20-206ENST00000578122 NLGN1Q8N2Q7 840 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms