RNA–Protein interactions for RNA: ENST00000576964.5

ABR-235, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-235ENST00000576964 MTFR1LQ9H019 292 aa13.99□□□□□ -0.17
ABR-235ENST00000576964 SPON1Q9HCB6 807 aa13.99□□□□□ -0.17
ABR-235ENST00000576964 ZNF330Q9Y3S2 320 aaPredicted RBP13.99□□□□□ -0.17
ABR-235ENST00000576964 CICQ96RK0 1608 aaPredicted RBP13.98□□□□□ -0.17
ABR-235ENST00000576964 CANXP27824 592 aaKnown RBP13.98□□□□□ -0.17
ABR-235ENST00000576964 WDR63Q8IWG1 891 aa13.98□□□□□ -0.17
ABR-235ENST00000576964 TJP1Q07157 1748 aa13.98□□□□□ -0.17
ABR-235ENST00000576964 IL16Q14005 1332 aa13.97□□□□□ -0.17
ABR-235ENST00000576964 GIGYF1O75420 1035 aaPredicted RBP13.97□□□□□ -0.17
ABR-235ENST00000576964 POLD1P28340 1107 aa13.97□□□□□ -0.17
ABR-235ENST00000576964 INTS5Q6P9B9 1019 aaKnown RBP13.97□□□□□ -0.17
ABR-235ENST00000576964 COL23A1Q86Y22 540 aaPredicted RBP13.97□□□□□ -0.17
ABR-235ENST00000576964 ARXQ96QS3 562 aa13.97□□□□□ -0.17
ABR-235ENST00000576964 CHMP4AQ9BY43 222 aa13.97□□□□□ -0.17
ABR-235ENST00000576964 MBIPQ9NS73 344 aa13.97□□□□□ -0.17
ABR-235ENST00000576964 PPP1R1BQ9UD71 204 aaPredicted RBP13.97□□□□□ -0.17
ABR-235ENST00000576964 ZBTB1Q9Y2K1 713 aa13.97□□□□□ -0.17
ABR-235ENST00000576964 COL5A3P25940 1745 aaPredicted RBP13.97□□□□□ -0.17
ABR-235ENST00000576964 KDM3BQ7LBC6 1761 aa13.96□□□□□ -0.17
ABR-235ENST00000576964 A0A087WZG4 1122 aa13.96□□□□□ -0.17
ABR-235ENST00000576964 ZPR1O75312 459 aa13.96□□□□□ -0.17
ABR-235ENST00000576964 PDGFDQ9GZP0 370 aaPredicted RBP13.96□□□□□ -0.17
ABR-235ENST00000576964 ATF5Q9Y2D1 282 aaPredicted RBP13.96□□□□□ -0.17
ABR-235ENST00000576964 USP16Q9Y5T5 823 aa13.96□□□□□ -0.17
ABR-235ENST00000576964 QSER1Q2KHR3 1735 aa13.95□□□□□ -0.18
ABR-235ENST00000576964 IL6STP40189 918 aaPredicted RBP13.95□□□□□ -0.18
ABR-235ENST00000576964 ARHGEF1Q92888 912 aaKnown RBP13.95□□□□□ -0.18
ABR-235ENST00000576964 MYH16Q9H6N6 1097 aa13.95□□□□□ -0.18
ABR-235ENST00000576964 SOS1Q07889 1333 aaPredicted RBP13.94□□□□□ -0.18
ABR-235ENST00000576964 PRAMEF22A3QJZ6 481 aa13.94□□□□□ -0.18
ABR-235ENST00000576964 A1BGP04217 495 aa13.94□□□□□ -0.18
ABR-235ENST00000576964 ZNF853P0CG23 659 aa13.94□□□□□ -0.18
ABR-235ENST00000576964 EIF2S2P20042 333 aaKnown RBP13.94□□□□□ -0.18
ABR-235ENST00000576964 SRCAPQ6ZRS2 3230 aa13.94□□□□□ -0.18
ABR-235ENST00000576964 COL15A1P39059 1388 aa13.94□□□□□ -0.18
ABR-235ENST00000576964 UBR3Q6ZT12 1888 aa13.93□□□□□ -0.18
ABR-235ENST00000576964 HOXB7P09629 217 aa13.93□□□□□ -0.18
ABR-235ENST00000576964 GOLGA2Q08379 1002 aa13.93□□□□□ -0.18
ABR-235ENST00000576964 SMIM5Q71RC9 77 aa13.93□□□□□ -0.18
ABR-235ENST00000576964 NLGN1Q8N2Q7 840 aa13.93□□□□□ -0.18
ABR-235ENST00000576964 CASZ1Q86V15 1759 aa13.93□□□□□ -0.18
ABR-235ENST00000576964 ERBB4Q15303 1308 aa13.92□□□□□ -0.18
ABR-235ENST00000576964 HDGFL1Q5TGJ6 251 aa13.92□□□□□ -0.18
ABR-235ENST00000576964 MSL1Q68DK7 614 aa13.92□□□□□ -0.18
ABR-235ENST00000576964 AMIGO3Q86WK7 504 aa13.92□□□□□ -0.18
ABR-235ENST00000576964 TSR2Q969E8 191 aaKnown RBP13.92□□□□□ -0.18
ABR-235ENST00000576964 TUBGCP6Q96RT7 1819 aa13.92□□□□□ -0.18
ABR-235ENST00000576964 MYL6BP14649 208 aa13.91□□□□□ -0.18
ABR-235ENST00000576964 EIF5P55010 431 aaKnown RBP13.91□□□□□ -0.18
ABR-235ENST00000576964 DUSP27Q5VZP5 1158 aa13.91□□□□□ -0.18
ABR-235ENST00000576964 LAMB4A4D0S4 1761 aa13.91□□□□□ -0.18
ABR-235ENST00000576964 USP42Q9H9J4 1324 aaKnown RBP13.9□□□□□ -0.18
ABR-235ENST00000576964 ELL2O00472 640 aaPredicted RBP13.9□□□□□ -0.18
ABR-235ENST00000576964 PIP4K2AP48426 406 aaPredicted RBP13.9□□□□□ -0.18
ABR-235ENST00000576964 HNRNPUQ00839 825 aaKnown RBP eCLIP13.9□□□□□ -0.18
ABR-235ENST00000576964 KRT24Q2M2I5 525 aa13.9□□□□□ -0.18
ABR-235ENST00000576964 KIF6Q6ZMV9 814 aa13.9□□□□□ -0.18
ABR-235ENST00000576964 DZIP3Q86Y13 1208 aaKnown RBP13.9□□□□□ -0.18
ABR-235ENST00000576964 NECTIN2Q92692 538 aa13.9□□□□□ -0.18
ABR-235ENST00000576964 NARFQ9UHQ1 456 aa13.9□□□□□ -0.18
ABR-235ENST00000576964 ZNF652Q9Y2D9 606 aa13.9□□□□□ -0.18
ABR-235ENST00000576964 FANCIQ9NVI1 1328 aa13.9□□□□□ -0.19
ABR-235ENST00000576964 MYH14Q7Z406 1995 aaKnown RBP13.89□□□□□ -0.19
ABR-235ENST00000576964 E9PSI1 815 aa13.89□□□□□ -0.19
ABR-235ENST00000576964 USPL1Q5W0Q7 1092 aa13.89□□□□□ -0.19
ABR-235ENST00000576964 SRP68Q9UHB9 627 aaKnown RBP13.89□□□□□ -0.19
ABR-235ENST00000576964 TBC1D2BQ9UPU7 963 aa13.89□□□□□ -0.19
ABR-235ENST00000576964 GYS1P13807 737 aa13.88□□□□□ -0.19
ABR-235ENST00000576964 TWISTNBQ3B726 338 aaPredicted RBP13.88□□□□□ -0.19
ABR-235ENST00000576964 CCDC30Q5VVM6 783 aa13.88□□□□□ -0.19
ABR-235ENST00000576964 KLHL34Q8N239 644 aa13.88□□□□□ -0.19
ABR-235ENST00000576964 STK31Q9BXU1 1019 aa13.88□□□□□ -0.19
ABR-235ENST00000576964 DBF4Q9UBU7 674 aaPredicted RBP13.88□□□□□ -0.19
ABR-235ENST00000576964 PARP3Q9Y6F1 533 aa13.88□□□□□ -0.19
ABR-235ENST00000576964 LRP5O75197 1615 aa13.88□□□□□ -0.19
ABR-235ENST00000576964 NBPF26B4DH59 902 aa13.87□□□□□ -0.19
ABR-235ENST00000576964 MMP10P09238 476 aa13.87□□□□□ -0.19
ABR-235ENST00000576964 PTGER2P43116 358 aa13.87□□□□□ -0.19
ABR-235ENST00000576964 NBPF10Q6P3W6 841 aaKnown RBP13.87□□□□□ -0.19
ABR-235ENST00000576964 NBPF15Q8N660 670 aa13.87□□□□□ -0.19
ABR-235ENST00000576964 C8orf58Q8NAV2 365 aa13.87□□□□□ -0.19
ABR-235ENST00000576964 DDX21Q9NR30 783 aaKnown RBP eCLIP13.87□□□□□ -0.19
ABR-235ENST00000576964 CHPF2Q9P2E5 772 aa13.87□□□□□ -0.19
ABR-235ENST00000576964 ZNF521Q96K83 1311 aa13.87□□□□□ -0.19
ABR-235ENST00000576964 NPHP1O15259 732 aa13.86□□□□□ -0.19
ABR-235ENST00000576964 HYPKQ9NX55 129 aa13.86□□□□□ -0.19
ABR-235ENST00000576964 C4AP0C0L4 1744 aa13.85□□□□□ -0.19
ABR-235ENST00000576964 FKBP8Q14318 412 aa13.85□□□□□ -0.19
ABR-235ENST00000576964 RGL2O15211 777 aa13.84□□□□□ -0.19
ABR-235ENST00000576964 CAMTA2O94983 1202 aa13.84□□□□□ -0.19
ABR-235ENST00000576964 EXOSC9Q06265 439 aaKnown RBP13.84□□□□□ -0.19
ABR-235ENST00000576964 AIMP1Q12904 312 aaKnown RBP13.84□□□□□ -0.19
ABR-235ENST00000576964 CLEC4GQ6UXB4 293 aa13.84□□□□□ -0.19
ABR-235ENST00000576964 BICDL1Q6ZP65 573 aa13.84□□□□□ -0.19
ABR-235ENST00000576964 TSPYL6Q8N831 410 aa13.84□□□□□ -0.19
ABR-235ENST00000576964 SETDB2Q96T68 719 aa13.84□□□□□ -0.19
ABR-235ENST00000576964 SGIP1Q9BQI5 828 aa13.84□□□□□ -0.19
ABR-235ENST00000576964 SPINK5Q9NQ38 1064 aaPredicted RBP13.84□□□□□ -0.19
ABR-235ENST00000576964 ERVV-1B6SEH8 477 aa13.83□□□□□ -0.2
ABR-235ENST00000576964 ANXA1P04083 346 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms