RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	SOS1	Q07889	1333 aa	Predicted RBP	33.29	■■■□□ 2.92
SRRM2-223	ENST00000575701	SYT17	Q9BSW7	474 aa		33.27	■■■□□ 2.92
SRRM2-223	ENST00000575701	THUMPD2	Q9BTF0	503 aa	Known RBP	33.27	■■■□□ 2.92
SRRM2-223	ENST00000575701	ZBTB1	Q9Y2K1	713 aa		33.27	■■■□□ 2.92
SRRM2-223	ENST00000575701	SNRPA1	P09661	255 aa	Known RBP	33.26	■■■□□ 2.91
SRRM2-223	ENST00000575701	NLGN1	Q8N2Q7	840 aa		33.26	■■■□□ 2.91
SRRM2-223	ENST00000575701	COL15A1	P39059	1388 aa		33.25	■■■□□ 2.91
SRRM2-223	ENST00000575701	BABAM1	Q9NWV8	329 aa		33.24	■■■□□ 2.91
SRRM2-223	ENST00000575701	RRP7A	Q9Y3A4	280 aa	Known RBP	33.24	■■■□□ 2.91
SRRM2-223	ENST00000575701	USP42	Q9H9J4	1324 aa	Known RBP	33.24	■■■□□ 2.91
SRRM2-223	ENST00000575701	GYS1	P13807	737 aa		33.23	■■■□□ 2.91
SRRM2-223	ENST00000575701	NEUROD2	Q15784	382 aa		33.23	■■■□□ 2.91
SRRM2-223	ENST00000575701	CCDC184	Q52MB2	194 aa		33.23	■■■□□ 2.91
SRRM2-223	ENST00000575701	MRS2	Q9HD23	443 aa		33.23	■■■□□ 2.91
SRRM2-223	ENST00000575701	CANX	P27824	592 aa	Known RBP	33.21	■■■□□ 2.91
SRRM2-223	ENST00000575701	MIS18A	Q9NYP9	233 aa		33.21	■■■□□ 2.91
SRRM2-223	ENST00000575701	LAMB4	A4D0S4	1761 aa		33.21	■■■□□ 2.91
SRRM2-223	ENST00000575701		A0A087WZG4	1122 aa		33.19	■■■□□ 2.9
SRRM2-223	ENST00000575701	DCAF8L1	A6NGE4	600 aa		33.19	■■■□□ 2.9
SRRM2-223	ENST00000575701	ZPR1	O75312	459 aa		33.19	■■■□□ 2.9
SRRM2-223	ENST00000575701	KLHL34	Q8N239	644 aa		33.19	■■■□□ 2.9
SRRM2-223	ENST00000575701	IL6ST	P40189	918 aa	Predicted RBP	33.18	■■■□□ 2.9
SRRM2-223	ENST00000575701	EIF5	P55010	431 aa	Known RBP	33.18	■■■□□ 2.9
SRRM2-223	ENST00000575701	TRIM35	Q9UPQ4	493 aa		33.18	■■■□□ 2.9
SRRM2-223	ENST00000575701	MMP10	P09238	476 aa		33.17	■■■□□ 2.9
SRRM2-223	ENST00000575701	NARF	Q9UHQ1	456 aa		33.17	■■■□□ 2.9
SRRM2-223	ENST00000575701	TSPYL4	Q9UJ04	414 aa		33.17	■■■□□ 2.9
SRRM2-223	ENST00000575701	USP16	Q9Y5T5	823 aa		33.17	■■■□□ 2.9
SRRM2-223	ENST00000575701	EIF4A1	P60842	406 aa	Known RBP	33.16	■■■□□ 2.9
SRRM2-223	ENST00000575701	SRP68	Q9UHB9	627 aa	Known RBP	33.16	■■■□□ 2.9
SRRM2-223	ENST00000575701	CD2AP	Q9Y5K6	639 aa		33.16	■■■□□ 2.9
SRRM2-223	ENST00000575701	APAF1	O14727	1248 aa		33.15	■■■□□ 2.9
SRRM2-223	ENST00000575701	NPM2	Q86SE8	214 aa	Known RBP	33.15	■■■□□ 2.9
SRRM2-223	ENST00000575701	A1BG	P04217	495 aa		33.14	■■■□□ 2.9
SRRM2-223	ENST00000575701	PRAMEF22	A3QJZ6	481 aa		33.13	■■■□□ 2.89
SRRM2-223	ENST00000575701	GIGYF1	O75420	1035 aa	Predicted RBP	33.12	■■■□□ 2.89
SRRM2-223	ENST00000575701	USPL1	Q5W0Q7	1092 aa		33.12	■■■□□ 2.89
SRRM2-223	ENST00000575701	FKBP8	Q14318	412 aa		33.11	■■■□□ 2.89
SRRM2-223	ENST00000575701	PARP3	Q9Y6F1	533 aa		33.11	■■■□□ 2.89
SRRM2-223	ENST00000575701	SCN7A	Q01118	1682 aa		33.1	■■■□□ 2.89
SRRM2-223	ENST00000575701	ZNF330	Q9Y3S2	320 aa	Predicted RBP	33.09	■■■□□ 2.89
SRRM2-223	ENST00000575701	CALD1	Q05682	793 aa	Known RBP	33.08	■■■□□ 2.89
SRRM2-223	ENST00000575701	CHL1	O00533	1208 aa		33.07	■■■□□ 2.88
SRRM2-223	ENST00000575701	NLGN2	Q8NFZ4	835 aa		33.07	■■■□□ 2.88
SRRM2-223	ENST00000575701	KIF13B	Q9NQT8	1826 aa		33.07	■■■□□ 2.88
SRRM2-223	ENST00000575701	TM4SF1	P30408	202 aa		33.04	■■■□□ 2.88
SRRM2-223	ENST00000575701	CFAP44	Q96MT7	982 aa		33.04	■■■□□ 2.88
SRRM2-223	ENST00000575701	BCOR	Q6W2J9	1755 aa		33.04	■■■□□ 2.88
SRRM2-223	ENST00000575701	C10orf71	Q711Q0	1435 aa		33.03	■■■□□ 2.88
SRRM2-223	ENST00000575701	BCL2L12	Q9HB09	334 aa		33.03	■■■□□ 2.88
SRRM2-223	ENST00000575701	LAS1L	Q9Y4W2	734 aa	Known RBP	33.03	■■■□□ 2.88
SRRM2-223	ENST00000575701	ERBB4	Q15303	1308 aa		33.02	■■■□□ 2.88
SRRM2-223	ENST00000575701	NCBP3	Q53F19	620 aa	Known RBP	33.02	■■■□□ 2.88
SRRM2-223	ENST00000575701	TBC1D2B	Q9UPU7	963 aa		33.02	■■■□□ 2.88
SRRM2-223	ENST00000575701	NBPF26	B4DH59	902 aa		33.01	■■■□□ 2.87
SRRM2-223	ENST00000575701	DDR1	Q08345	913 aa		33.01	■■■□□ 2.87
SRRM2-223	ENST00000575701	NBPF10	Q6P3W6	841 aa	Known RBP	33.01	■■■□□ 2.87
SRRM2-223	ENST00000575701	DZIP3	Q86Y13	1208 aa	Known RBP	33.01	■■■□□ 2.87
SRRM2-223	ENST00000575701	NBPF15	Q8N660	670 aa		33.01	■■■□□ 2.87
SRRM2-223	ENST00000575701	POLRMT	O00411	1230 aa	Known RBP	33	■■■□□ 2.87
SRRM2-223	ENST00000575701	PIP4K2A	P48426	406 aa	Predicted RBP	33	■■■□□ 2.87
SRRM2-223	ENST00000575701	CCDC27	Q2M243	656 aa		33	■■■□□ 2.87
SRRM2-223	ENST00000575701	RGL2	O15211	777 aa		32.99	■■■□□ 2.87
SRRM2-223	ENST00000575701	NFIX	Q14938	502 aa		32.99	■■■□□ 2.87
SRRM2-223	ENST00000575701	IFT57	Q9NWB7	429 aa		32.99	■■■□□ 2.87
SRRM2-223	ENST00000575701	CAMTA2	O94983	1202 aa		32.98	■■■□□ 2.87
SRRM2-223	ENST00000575701	GNAI1	P63096	354 aa		32.98	■■■□□ 2.87
SRRM2-223	ENST00000575701	NRXN2	Q9P2S2	1712 aa		32.97	■■■□□ 2.87
SRRM2-223	ENST00000575701	ZNF853	P0CG23	659 aa		32.96	■■■□□ 2.87
SRRM2-223	ENST00000575701	TGFB2	P61812	414 aa		32.96	■■■□□ 2.87
SRRM2-223	ENST00000575701	GPR162	Q16538	588 aa		32.96	■■■□□ 2.87
SRRM2-223	ENST00000575701	CLEC4G	Q6UXB4	293 aa		32.95	■■■□□ 2.87
SRRM2-223	ENST00000575701	ZNF652	Q9Y2D9	606 aa		32.95	■■■□□ 2.87
SRRM2-223	ENST00000575701	HOXB7	P09629	217 aa		32.94	■■■□□ 2.86
SRRM2-223	ENST00000575701	KIAA1551	Q9HCM1	1747 aa		32.94	■■■□□ 2.86
SRRM2-223	ENST00000575701	PXDNL	A1KZ92	1463 aa		32.93	■■■□□ 2.86
SRRM2-223	ENST00000575701	AFDN	P55196	1824 aa	Known RBP	32.93	■■■□□ 2.86
SRRM2-223	ENST00000575701	MBIP	Q9NS73	344 aa		32.93	■■■□□ 2.86
SRRM2-223	ENST00000575701	TBC1D9B	Q66K14	1250 aa		32.92	■■■□□ 2.86
SRRM2-223	ENST00000575701	FAM9B	Q8IZU0	186 aa		32.92	■■■□□ 2.86
SRRM2-223	ENST00000575701	CARMIL3	Q8ND23	1372 aa		32.92	■■■□□ 2.86
SRRM2-223	ENST00000575701	SERPINB2	P05120	415 aa		32.91	■■■□□ 2.86
SRRM2-223	ENST00000575701	EIF2S2	P20042	333 aa	Known RBP	32.9	■■■□□ 2.86
SRRM2-223	ENST00000575701	WWC1	Q8IX03	1113 aa		32.9	■■■□□ 2.86
SRRM2-223	ENST00000575701	PELP1	Q8IZL8	1130 aa	Known RBP	32.9	■■■□□ 2.86
SRRM2-223	ENST00000575701	BICDL1	Q6ZP65	573 aa		32.89	■■■□□ 2.86
SRRM2-223	ENST00000575701	MYL6B	P14649	208 aa		32.88	■■■□□ 2.85
SRRM2-223	ENST00000575701	NGEF	Q8N5V2	710 aa		32.88	■■■□□ 2.85
SRRM2-223	ENST00000575701	SETDB2	Q96T68	719 aa		32.88	■■■□□ 2.85
SRRM2-223	ENST00000575701	GRIN3B	O60391	1043 aa		32.87	■■■□□ 2.85
SRRM2-223	ENST00000575701	KRT24	Q2M2I5	525 aa		32.87	■■■□□ 2.85
SRRM2-223	ENST00000575701	KIF6	Q6ZMV9	814 aa		32.87	■■■□□ 2.85
SRRM2-223	ENST00000575701	N4BP2	Q86UW6	1770 aa	Predicted RBP	32.87	■■■□□ 2.85
SRRM2-223	ENST00000575701	IL16	Q14005	1332 aa		32.86	■■■□□ 2.85
SRRM2-223	ENST00000575701	ERVV-1	B6SEH8	477 aa		32.86	■■■□□ 2.85
SRRM2-223	ENST00000575701	PDIA6	Q15084	440 aa		32.85	■■■□□ 2.85
SRRM2-223	ENST00000575701	MAP3K15	Q6ZN16	1313 aa		32.84	■■■□□ 2.85
SRRM2-223	ENST00000575701	CCER2	I3L3R5	266 aa		32.84	■■■□□ 2.85
SRRM2-223	ENST00000575701	YBX3	P16989	372 aa	Known RBP eCLIP	32.84	■■■□□ 2.85
SRRM2-223	ENST00000575701	HDGFL1	Q5TGJ6	251 aa		32.83	■■■□□ 2.85

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms