RNA–Protein interactions for RNA: ENST00000573548.1

RNF213-216, Transcript of ring finger protein 213, humanhuman

TSL 2

Gene RNF213, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-216ENST00000573548 KIF16BQ96L93 1317 aa17■□□□□ 0.31
RNF213-216ENST00000573548 BRPF1P55201 1214 aaPredicted RBP17■□□□□ 0.31
RNF213-216ENST00000573548 KRT24Q2M2I5 525 aa17■□□□□ 0.31
RNF213-216ENST00000573548 SSH1Q8WYL5 1049 aa17■□□□□ 0.31
RNF213-216ENST00000573548 STK32BQ9NY57 414 aa17■□□□□ 0.31
RNF213-216ENST00000573548 HEG1Q9ULI3 1381 aa17■□□□□ 0.31
RNF213-216ENST00000573548 NPM2Q86SE8 214 aaKnown RBP16.99■□□□□ 0.31
RNF213-216ENST00000573548 SPON1Q9HCB6 807 aa16.99■□□□□ 0.31
RNF213-216ENST00000573548 DBF4Q9UBU7 674 aaPredicted RBP16.99■□□□□ 0.31
RNF213-216ENST00000573548 QSER1Q2KHR3 1735 aa16.99■□□□□ 0.31
RNF213-216ENST00000573548 TOGARAM1Q9Y4F4 1720 aa16.99■□□□□ 0.31
RNF213-216ENST00000573548 SLC4A2P04920 1241 aa16.98■□□□□ 0.31
RNF213-216ENST00000573548 FRAT1Q92837 279 aaPredicted RBP16.98■□□□□ 0.31
RNF213-216ENST00000573548 TUBGCP6Q96RT7 1819 aa16.98■□□□□ 0.31
RNF213-216ENST00000573548 ERBB4Q15303 1308 aa16.97■□□□□ 0.31
RNF213-216ENST00000573548 BCAR3O75815 825 aa16.97■□□□□ 0.31
RNF213-216ENST00000573548 RRP1P56182 461 aaKnown RBP16.97■□□□□ 0.31
RNF213-216ENST00000573548 ZKSCAN2Q63HK3 967 aa16.97■□□□□ 0.31
RNF213-216ENST00000573548 ARHGAP45Q92619 1136 aa16.97■□□□□ 0.31
RNF213-216ENST00000573548 HYPKQ9NX55 129 aa16.97■□□□□ 0.31
RNF213-216ENST00000573548 PALLDQ8WX93 1383 aa16.97■□□□□ 0.31
RNF213-216ENST00000573548 LOC102724428A0A0B4J2F2 783 aa16.96■□□□□ 0.31
RNF213-216ENST00000573548 ATP6V1AP38606 617 aa16.96■□□□□ 0.31
RNF213-216ENST00000573548 SIK1P57059 783 aa16.96■□□□□ 0.31
RNF213-216ENST00000573548 SLC15A2Q16348 729 aa16.96■□□□□ 0.31
RNF213-216ENST00000573548 MRPL50Q8N5N7 158 aaKnown RBP16.96■□□□□ 0.31
RNF213-216ENST00000573548 NECTIN2Q92692 538 aa16.96■□□□□ 0.31
RNF213-216ENST00000573548 BCL2L13Q9BXK5 485 aa16.96■□□□□ 0.31
RNF213-216ENST00000573548 PPP1R1BQ9UD71 204 aaPredicted RBP16.96■□□□□ 0.31
RNF213-216ENST00000573548 API5Q9BZZ5 524 aaKnown RBP16.95■□□□□ 0.3
RNF213-216ENST00000573548 PTPRCP08575 1304 aa16.95■□□□□ 0.3
RNF213-216ENST00000573548 ITGB4P16144 1822 aa16.94■□□□□ 0.3
RNF213-216ENST00000573548 DDX58O95786 925 aaKnown RBP16.94■□□□□ 0.3
RNF213-216ENST00000573548 FTSJ3Q8IY81 847 aaKnown RBP16.94■□□□□ 0.3
RNF213-216ENST00000573548 PDGFDQ9GZP0 370 aaPredicted RBP16.94■□□□□ 0.3
RNF213-216ENST00000573548 DDX21Q9NR30 783 aaKnown RBP eCLIP16.94■□□□□ 0.3
RNF213-216ENST00000573548 NOB1Q9ULX3 412 aaKnown RBP16.94■□□□□ 0.3
RNF213-216ENST00000573548 USP16Q9Y5T5 823 aa16.94■□□□□ 0.3
RNF213-216ENST00000573548 C5P01031 1676 aa16.94■□□□□ 0.3
RNF213-216ENST00000573548 SIPA1L3O60292 1781 aaPredicted RBP16.93■□□□□ 0.3
RNF213-216ENST00000573548 KDM3BQ7LBC6 1761 aa16.93■□□□□ 0.3
RNF213-216ENST00000573548 TCERG1O14776 1098 aaKnown RBP16.93■□□□□ 0.3
RNF213-216ENST00000573548 ZBTB7AO95365 584 aa16.93■□□□□ 0.3
RNF213-216ENST00000573548 PDE3AQ14432 1141 aa16.93■□□□□ 0.3
RNF213-216ENST00000573548 CHPF2Q9P2E5 772 aa16.93■□□□□ 0.3
RNF213-216ENST00000573548 RNF123Q5XPI4 1314 aa16.93■□□□□ 0.3
RNF213-216ENST00000573548 SLC27A3Q5K4L6 730 aa16.92■□□□□ 0.3
RNF213-216ENST00000573548 ATF7IPQ6VMQ6 1270 aa16.92■□□□□ 0.3
RNF213-216ENST00000573548 DNAJC10Q8IXB1 793 aa16.92■□□□□ 0.3
RNF213-216ENST00000573548 CHMP4BQ9H444 224 aaKnown RBP16.92■□□□□ 0.3
RNF213-216ENST00000573548 LRRC4BQ9NT99 713 aa16.92■□□□□ 0.3
RNF213-216ENST00000573548 CCNL1Q9UK58 526 aaPredicted RBP16.92■□□□□ 0.3
RNF213-216ENST00000573548 ZNF827Q17R98 1081 aa16.91■□□□□ 0.3
RNF213-216ENST00000573548 PRAMEF22A3QJZ6 481 aa16.9■□□□□ 0.3
RNF213-216ENST00000573548 FLIIQ13045 1269 aa16.9■□□□□ 0.3
RNF213-216ENST00000573548 FKBP5Q13451 457 aaPredicted RBP16.9■□□□□ 0.3
RNF213-216ENST00000573548 DZIP1LQ8IYY4 767 aaKnown RBP16.9■□□□□ 0.3
RNF213-216ENST00000573548 KCPQ6ZWJ8 1503 aa16.9■□□□□ 0.3
RNF213-216ENST00000573548 VIRMAQ69YN4 1812 aaKnown RBP16.89■□□□□ 0.29
RNF213-216ENST00000573548 TAF1LQ8IZX4 1826 aa16.89■□□□□ 0.29
RNF213-216ENST00000573548 PLIN1O60240 522 aa16.89■□□□□ 0.29
RNF213-216ENST00000573548 CYP19A1P11511 503 aaPredicted RBP16.89■□□□□ 0.29
RNF213-216ENST00000573548 MYL6BP14649 208 aa16.88■□□□□ 0.29
RNF213-216ENST00000573548 ERICH6BQ5W0A0 696 aa16.88■□□□□ 0.29
RNF213-216ENST00000573548 MTFR1LQ9H019 292 aa16.88■□□□□ 0.29
RNF213-216ENST00000573548 CCDC87Q9NVE4 849 aa16.88■□□□□ 0.29
RNF213-216ENST00000573548 A1BGP04217 495 aa16.87■□□□□ 0.29
RNF213-216ENST00000573548 PTGER2P43116 358 aa16.87■□□□□ 0.29
RNF213-216ENST00000573548 RC3H1Q5TC82 1133 aaKnown RBP16.87■□□□□ 0.29
RNF213-216ENST00000573548 ATF5Q9Y2D1 282 aaPredicted RBP16.87■□□□□ 0.29
RNF213-216ENST00000573548 A0A087WZG4 1122 aa16.86■□□□□ 0.29
RNF213-216ENST00000573548 KCNQ4P56696 695 aa16.86■□□□□ 0.29
RNF213-216ENST00000573548 KIF6Q6ZMV9 814 aa16.86■□□□□ 0.29
RNF213-216ENST00000573548 AKT1S1Q96B36 256 aa16.86■□□□□ 0.29
RNF213-216ENST00000573548 SLC4A9Q96Q91 983 aa16.86■□□□□ 0.29
RNF213-216ENST00000573548 COL24A1Q17RW2 1714 aa16.86■□□□□ 0.29
RNF213-216ENST00000573548 TRIM27P14373 513 aa16.85■□□□□ 0.29
RNF213-216ENST00000573548 IL6STP40189 918 aaPredicted RBP16.85■□□□□ 0.29
RNF213-216ENST00000573548 CRKLP46109 303 aaKnown RBP16.85■□□□□ 0.29
RNF213-216ENST00000573548 AIMP1Q12904 312 aaKnown RBP16.85■□□□□ 0.29
RNF213-216ENST00000573548 AAMPQ13685 434 aa16.85■□□□□ 0.29
RNF213-216ENST00000573548 COPS6Q7L5N1 327 aa16.85■□□□□ 0.29
RNF213-216ENST00000573548 RIC3Q7Z5B4 369 aa16.85■□□□□ 0.29
RNF213-216ENST00000573548 ARXQ96QS3 562 aa16.85■□□□□ 0.29
RNF213-216ENST00000573548 ZNF330Q9Y3S2 320 aaPredicted RBP16.85■□□□□ 0.29
RNF213-216ENST00000573548 C4BP0C0L5 1744 aa16.84■□□□□ 0.29
RNF213-216ENST00000573548 CCT4P50991 539 aaKnown RBP16.84■□□□□ 0.29
RNF213-216ENST00000573548 NEXNQ0ZGT2 675 aa16.84■□□□□ 0.29
RNF213-216ENST00000573548 ITPK1Q13572 414 aa16.84■□□□□ 0.29
RNF213-216ENST00000573548 PDIA6Q15084 440 aa16.84■□□□□ 0.29
RNF213-216ENST00000573548 KSR2Q6VAB6 950 aa16.84■□□□□ 0.29
RNF213-216ENST00000573548 ANKRD13DQ6ZTN6 518 aa16.84■□□□□ 0.29
RNF213-216ENST00000573548 G2E3Q7L622 706 aa16.84■□□□□ 0.29
RNF213-216ENST00000573548 XAGE3Q8WTP9 111 aa16.84■□□□□ 0.29
RNF213-216ENST00000573548 CLUAP1Q96AJ1 413 aa16.84■□□□□ 0.29
RNF213-216ENST00000573548 PHAXQ9H814 394 aaKnown RBP16.84■□□□□ 0.29
RNF213-216ENST00000573548 TFCP2L1Q9NZI6 479 aa16.84■□□□□ 0.29
RNF213-216ENST00000573548 PNPLA7Q6ZV29 1317 aa16.84■□□□□ 0.29
RNF213-216ENST00000573548 CNTNAP4Q9C0A0 1308 aa16.84■□□□□ 0.29
RNF213-216ENST00000573548 ANXA1P04083 346 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms