RNA–Protein interactions for RNA: ENST00000572585.5

ABR-218, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 3,776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-218ENST00000572585 CCDC83Q8IWF9 413 aa13.87□□□□□ -0.19
ABR-218ENST00000572585 A0A1W2PP64 1363 aa13.87□□□□□ -0.19
ABR-218ENST00000572585 UHRF1BP1LA0JNW5 1464 aa13.87□□□□□ -0.19
ABR-218ENST00000572585 SKILP12757 684 aa13.86□□□□□ -0.19
ABR-218ENST00000572585 PDCP20941 246 aa13.86□□□□□ -0.19
ABR-218ENST00000572585 TRMT1Q9NXH9 659 aaKnown RBP13.86□□□□□ -0.19
ABR-218ENST00000572585 VGFO15240 615 aaPredicted RBP13.86□□□□□ -0.19
ABR-218ENST00000572585 TMCO3Q6UWJ1 677 aa13.86□□□□□ -0.19
ABR-218ENST00000572585 MRVI1Q9Y6F6 885 aa13.86□□□□□ -0.19
ABR-218ENST00000572585 CCT4P50991 539 aaKnown RBP13.86□□□□□ -0.19
ABR-218ENST00000572585 AK2P54819 239 aa13.86□□□□□ -0.19
ABR-218ENST00000572585 HNRNPH2P55795 449 aaKnown RBP13.86□□□□□ -0.19
ABR-218ENST00000572585 FILIP1Q7Z7B0 1213 aa13.86□□□□□ -0.19
ABR-218ENST00000572585 CACTINQ8WUQ7 758 aaKnown RBP13.86□□□□□ -0.19
ABR-218ENST00000572585 RPGRIP1LQ68CZ1 1315 aa13.85□□□□□ -0.19
ABR-218ENST00000572585 HSPA4P34932 840 aa13.85□□□□□ -0.19
ABR-218ENST00000572585 LARP1BQ659C4 914 aaKnown RBP13.85□□□□□ -0.19
ABR-218ENST00000572585 GOLGA6L1Q8N7Z2 621 aa13.85□□□□□ -0.19
ABR-218ENST00000572585 GTF3C6Q969F1 213 aa13.85□□□□□ -0.19
ABR-218ENST00000572585 LARP6Q9BRS8 491 aaKnown RBP13.85□□□□□ -0.19
ABR-218ENST00000572585 SH2B1Q9NRF2 756 aaPredicted RBP13.85□□□□□ -0.19
ABR-218ENST00000572585 USP32Q8NFA0 1604 aa13.85□□□□□ -0.19
ABR-218ENST00000572585 ZNF853P0CG23 659 aa13.85□□□□□ -0.19
ABR-218ENST00000572585 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.85□□□□□ -0.19
ABR-218ENST00000572585 SCAND2PQ9GZW5 306 aaPredicted RBP13.85□□□□□ -0.19
ABR-218ENST00000572585 ASXL2Q76L83 1435 aa13.85□□□□□ -0.19
ABR-218ENST00000572585 DACT1Q9NYF0 836 aa13.85□□□□□ -0.19
ABR-218ENST00000572585 RAD50Q92878 1312 aa13.85□□□□□ -0.19
ABR-218ENST00000572585 ERCC6L2Q5T890 1561 aa13.84□□□□□ -0.19
ABR-218ENST00000572585 MSH6P52701 1360 aa13.84□□□□□ -0.19
ABR-218ENST00000572585 CYP2C19P33261 490 aa13.84□□□□□ -0.19
ABR-218ENST00000572585 ZRSR1Q15695 479 aaKnown RBP13.84□□□□□ -0.19
ABR-218ENST00000572585 SPATA32Q96LK8 384 aa13.84□□□□□ -0.19
ABR-218ENST00000572585 RASSF4Q9H2L5 321 aa13.84□□□□□ -0.19
ABR-218ENST00000572585 PLCH2O75038 1416 aa13.84□□□□□ -0.19
ABR-218ENST00000572585 POLR3GO15318 223 aaPredicted RBP13.84□□□□□ -0.19
ABR-218ENST00000572585 MNS1Q8NEH6 495 aa13.84□□□□□ -0.19
ABR-218ENST00000572585 TDRD7Q8NHU6 1098 aaKnown RBP13.84□□□□□ -0.19
ABR-218ENST00000572585 TULP2O00295 520 aa13.83□□□□□ -0.19
ABR-218ENST00000572585 MTMR6Q9Y217 621 aa13.83□□□□□ -0.19
ABR-218ENST00000572585 CHD1O14646 1710 aa13.83□□□□□ -0.2
ABR-218ENST00000572585 MINK1Q8N4C8 1332 aaPredicted RBP13.83□□□□□ -0.2
ABR-218ENST00000572585 ZFYVE9O95405 1425 aa13.83□□□□□ -0.2
ABR-218ENST00000572585 SLC4A2P04920 1241 aa13.83□□□□□ -0.2
ABR-218ENST00000572585 GNAI3P08754 354 aa13.83□□□□□ -0.2
ABR-218ENST00000572585 CASTP20810 708 aaKnown RBP13.83□□□□□ -0.2
ABR-218ENST00000572585 UBXN4Q92575 508 aa13.83□□□□□ -0.2
ABR-218ENST00000572585 PDRG1Q9NUG6 133 aa13.83□□□□□ -0.2
ABR-218ENST00000572585 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.83□□□□□ -0.2
ABR-218ENST00000572585 PLA2G4DQ86XP0 818 aa13.83□□□□□ -0.2
ABR-218ENST00000572585 HOMER1Q86YM7 354 aa13.83□□□□□ -0.2
ABR-218ENST00000572585 RUFY2Q8WXA3 655 aa13.83□□□□□ -0.2
ABR-218ENST00000572585 AK7Q96M32 723 aa13.83□□□□□ -0.2
ABR-218ENST00000572585 DNAJC25Q9H1X3 360 aa13.83□□□□□ -0.2
ABR-218ENST00000572585 ATP10DQ9P241 1426 aa13.83□□□□□ -0.2
ABR-218ENST00000572585 CDC25BP30305 580 aa13.82□□□□□ -0.2
ABR-218ENST00000572585 SNW1Q13573 536 aaKnown RBP13.82□□□□□ -0.2
ABR-218ENST00000572585 KRT24Q2M2I5 525 aa13.82□□□□□ -0.2
ABR-218ENST00000572585 FERMT3Q86UX7 667 aa13.82□□□□□ -0.2
ABR-218ENST00000572585 LRRC8AQ8IWT6 810 aa13.82□□□□□ -0.2
ABR-218ENST00000572585 CYP46A1Q9Y6A2 500 aa13.82□□□□□ -0.2
ABR-218ENST00000572585 FANCAO15360 1455 aa13.82□□□□□ -0.2
ABR-218ENST00000572585 EFCC1Q9HA90 598 aa13.82□□□□□ -0.2
ABR-218ENST00000572585 PPP6R1Q9UPN7 881 aa13.82□□□□□ -0.2
ABR-218ENST00000572585 CCDC69A6NI79 296 aa13.82□□□□□ -0.2
ABR-218ENST00000572585 NOM1Q5C9Z4 860 aaKnown RBP13.82□□□□□ -0.2
ABR-218ENST00000572585 PAXIP1Q6ZW49 1069 aaPredicted RBP13.82□□□□□ -0.2
ABR-218ENST00000572585 ZKSCAN1P17029 563 aaPredicted RBP13.81□□□□□ -0.2
ABR-218ENST00000572585 LIG1P18858 919 aa13.81□□□□□ -0.2
ABR-218ENST00000572585 CTR9Q6PD62 1173 aa13.81□□□□□ -0.2
ABR-218ENST00000572585 CNTROBQ8N137 903 aa13.81□□□□□ -0.2
ABR-218ENST00000572585 STK31Q9BXU1 1019 aa13.81□□□□□ -0.2
ABR-218ENST00000572585 SNX14Q9Y5W7 946 aa13.81□□□□□ -0.2
ABR-218ENST00000572585 NPHP3Q7Z494 1330 aa13.81□□□□□ -0.2
ABR-218ENST00000572585 MYO3AQ8NEV4 1616 aa13.81□□□□□ -0.2
ABR-218ENST00000572585 CAPN2P17655 700 aa13.81□□□□□ -0.2
ABR-218ENST00000572585 GSDMDP57764 484 aa13.81□□□□□ -0.2
ABR-218ENST00000572585 RBM6P78332 1123 aaKnown RBP13.81□□□□□ -0.2
ABR-218ENST00000572585 DCTN1Q14203 1278 aa13.81□□□□□ -0.2
ABR-218ENST00000572585 FEZ2Q9UHY8 353 aaPredicted RBP13.81□□□□□ -0.2
ABR-218ENST00000572585 KIF1BPQ96EK5 621 aa13.81□□□□□ -0.2
ABR-218ENST00000572585 ST7Q9NRC1 585 aa13.81□□□□□ -0.2
ABR-218ENST00000572585 RAD51AP2Q09MP3 1159 aa13.8□□□□□ -0.2
ABR-218ENST00000572585 ARHGAP29Q52LW3 1261 aa13.8□□□□□ -0.2
ABR-218ENST00000572585 JAKMIP1Q96N16 626 aaKnown RBP13.8□□□□□ -0.2
ABR-218ENST00000572585 CLSTN2Q9H4D0 955 aa13.8□□□□□ -0.2
ABR-218ENST00000572585 TET3O43151 1660 aa13.8□□□□□ -0.2
ABR-218ENST00000572585 SETBP1Q9Y6X0 1596 aa13.8□□□□□ -0.2
ABR-218ENST00000572585 TPM1P09493 284 aa13.8□□□□□ -0.2
ABR-218ENST00000572585 RUFY3Q7L099 469 aa13.8□□□□□ -0.2
ABR-218ENST00000572585 TTC6Q86TZ1 520 aa13.8□□□□□ -0.2
ABR-218ENST00000572585 COL3A1P02461 1466 aaPredicted RBP13.8□□□□□ -0.2
ABR-218ENST00000572585 FAM83GA6ND36 823 aa13.8□□□□□ -0.2
ABR-218ENST00000572585 GORABQ5T7V8 394 aa13.8□□□□□ -0.2
ABR-218ENST00000572585 POLKQ9UBT6 870 aa13.8□□□□□ -0.2
ABR-218ENST00000572585 RSPH14Q9UHP6 348 aa13.8□□□□□ -0.2
ABR-218ENST00000572585 PPRC1Q5VV67 1664 aaKnown RBP13.8□□□□□ -0.2
ABR-218ENST00000572585 TUBB4AP04350 444 aa13.79□□□□□ -0.2
ABR-218ENST00000572585 DHX8Q14562 1220 aaKnown RBP13.79□□□□□ -0.2
ABR-218ENST00000572585 ERCC6LQ2NKX8 1250 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms