RNA–Protein interactions for RNA: ENST00000571459.5

LITAF-207, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-207ENST00000571459 TUBGCP6Q96RT7 1819 aa13.35□□□□□ -0.27
LITAF-207ENST00000571459 MSH5O43196 834 aa13.35□□□□□ -0.27
LITAF-207ENST00000571459 PHF14O94880 888 aa13.35□□□□□ -0.27
LITAF-207ENST00000571459 HNRNPUQ00839 825 aaKnown RBP eCLIP13.35□□□□□ -0.27
LITAF-207ENST00000571459 KRT24Q2M2I5 525 aa13.35□□□□□ -0.27
LITAF-207ENST00000571459 AMIGO3Q86WK7 504 aa13.35□□□□□ -0.27
LITAF-207ENST00000571459 PDGFDQ9GZP0 370 aaPredicted RBP13.35□□□□□ -0.27
LITAF-207ENST00000571459 RTCBQ9Y3I0 505 aaKnown RBP13.35□□□□□ -0.27
LITAF-207ENST00000571459 ZNF521Q96K83 1311 aa13.35□□□□□ -0.27
LITAF-207ENST00000571459 UBR3Q6ZT12 1888 aa13.34□□□□□ -0.27
LITAF-207ENST00000571459 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.34□□□□□ -0.27
LITAF-207ENST00000571459 RPS6KA4O75676 772 aa13.34□□□□□ -0.27
LITAF-207ENST00000571459 A1BGP04217 495 aa13.34□□□□□ -0.27
LITAF-207ENST00000571459 CANXP27824 592 aaKnown RBP13.34□□□□□ -0.27
LITAF-207ENST00000571459 SPINK5Q9NQ38 1064 aaPredicted RBP13.34□□□□□ -0.27
LITAF-207ENST00000571459 CICQ96RK0 1608 aaPredicted RBP13.34□□□□□ -0.27
LITAF-207ENST00000571459 PNPLA7Q6ZV29 1317 aa13.34□□□□□ -0.27
LITAF-207ENST00000571459 ELL2O00472 640 aaPredicted RBP13.33□□□□□ -0.28
LITAF-207ENST00000571459 EIF2S2P20042 333 aaKnown RBP13.33□□□□□ -0.28
LITAF-207ENST00000571459 GOLGA2Q08379 1002 aa13.33□□□□□ -0.28
LITAF-207ENST00000571459 TRAPPC3LQ5T215 181 aa13.33□□□□□ -0.28
LITAF-207ENST00000571459 COL23A1Q86Y22 540 aaPredicted RBP13.33□□□□□ -0.28
LITAF-207ENST00000571459 FLAD1Q8NFF5 587 aa13.33□□□□□ -0.28
LITAF-207ENST00000571459 ZBTB1Q9Y2K1 713 aa13.33□□□□□ -0.28
LITAF-207ENST00000571459 SSFA2P28290 1259 aa13.32□□□□□ -0.28
LITAF-207ENST00000571459 PIP4K2AP48426 406 aaPredicted RBP13.32□□□□□ -0.28
LITAF-207ENST00000571459 DUSP27Q5VZP5 1158 aa13.32□□□□□ -0.28
LITAF-207ENST00000571459 C8orf58Q8NAV2 365 aa13.32□□□□□ -0.28
LITAF-207ENST00000571459 QSER1Q2KHR3 1735 aa13.32□□□□□ -0.28
LITAF-207ENST00000571459 NECTIN2Q92692 538 aa13.31□□□□□ -0.28
LITAF-207ENST00000571459 ARHGEF1Q92888 912 aaKnown RBP13.31□□□□□ -0.28
LITAF-207ENST00000571459 MYH16Q9H6N6 1097 aa13.31□□□□□ -0.28
LITAF-207ENST00000571459 ZNF330Q9Y3S2 320 aaPredicted RBP13.31□□□□□ -0.28
LITAF-207ENST00000571459 SOS1Q07889 1333 aaPredicted RBP13.31□□□□□ -0.28
LITAF-207ENST00000571459 FANCIQ9NVI1 1328 aa13.31□□□□□ -0.28
LITAF-207ENST00000571459 NBPF26B4DH59 902 aa13.3□□□□□ -0.28
LITAF-207ENST00000571459 ZBTB7AO95365 584 aa13.3□□□□□ -0.28
LITAF-207ENST00000571459 ADRA2BP18089 450 aa13.3□□□□□ -0.28
LITAF-207ENST00000571459 RFC4P35249 363 aa13.3□□□□□ -0.28
LITAF-207ENST00000571459 NBPF10Q6P3W6 841 aaKnown RBP13.3□□□□□ -0.28
LITAF-207ENST00000571459 NBPF15Q8N660 670 aa13.3□□□□□ -0.28
LITAF-207ENST00000571459 TSPYL6Q8N831 410 aa13.3□□□□□ -0.28
LITAF-207ENST00000571459 CDCA7LQ96GN5 454 aa13.3□□□□□ -0.28
LITAF-207ENST00000571459 ARXQ96QS3 562 aa13.3□□□□□ -0.28
LITAF-207ENST00000571459 LAMB4A4D0S4 1761 aa13.3□□□□□ -0.28
LITAF-207ENST00000571459 E9PSI1 815 aa13.29□□□□□ -0.28
LITAF-207ENST00000571459 HOXB7P09629 217 aa13.29□□□□□ -0.28
LITAF-207ENST00000571459 IL6STP40189 918 aaPredicted RBP13.29□□□□□ -0.28
LITAF-207ENST00000571459 EIF5P55010 431 aaKnown RBP13.29□□□□□ -0.28
LITAF-207ENST00000571459 EXOSC9Q06265 439 aaKnown RBP13.29□□□□□ -0.28
LITAF-207ENST00000571459 SLFN5Q08AF3 891 aa13.29□□□□□ -0.28
LITAF-207ENST00000571459 NPM2Q86SE8 214 aaKnown RBP13.29□□□□□ -0.28
LITAF-207ENST00000571459 ATF5Q9Y2D1 282 aaPredicted RBP13.29□□□□□ -0.28
LITAF-207ENST00000571459 CASZ1Q86V15 1759 aa13.29□□□□□ -0.28
LITAF-207ENST00000571459 MYL6BP14649 208 aa13.28□□□□□ -0.28
LITAF-207ENST00000571459 HDGFL1Q5TGJ6 251 aa13.28□□□□□ -0.28
LITAF-207ENST00000571459 SLC16A10Q8TF71 515 aa13.28□□□□□ -0.28
LITAF-207ENST00000571459 A0A087WZG4 1122 aa13.27□□□□□ -0.29
LITAF-207ENST00000571459 ZPR1O75312 459 aa13.27□□□□□ -0.29
LITAF-207ENST00000571459 TWISTNBQ3B726 338 aaPredicted RBP13.27□□□□□ -0.29
LITAF-207ENST00000571459 SRP68Q9UHB9 627 aaKnown RBP13.27□□□□□ -0.29
LITAF-207ENST00000571459 TBC1D2BQ9UPU7 963 aa13.27□□□□□ -0.29
LITAF-207ENST00000571459 COL15A1P39059 1388 aa13.27□□□□□ -0.29
LITAF-207ENST00000571459 ANXA1P04083 346 aa13.26□□□□□ -0.29
LITAF-207ENST00000571459 PDIA6Q15084 440 aa13.26□□□□□ -0.29
LITAF-207ENST00000571459 ERBB4Q15303 1308 aa13.26□□□□□ -0.29
LITAF-207ENST00000571459 PROSER3Q2NL68 480 aa13.26□□□□□ -0.29
LITAF-207ENST00000571459 MSL1Q68DK7 614 aa13.26□□□□□ -0.29
LITAF-207ENST00000571459 MTFR1LQ9H019 292 aa13.26□□□□□ -0.29
LITAF-207ENST00000571459 NARFQ9UHQ1 456 aa13.26□□□□□ -0.29
LITAF-207ENST00000571459 SRCAPQ6ZRS2 3230 aa13.25□□□□□ -0.29
LITAF-207ENST00000571459 CCDC30Q5VVM6 783 aa13.25□□□□□ -0.29
LITAF-207ENST00000571459 USPL1Q5W0Q7 1092 aa13.25□□□□□ -0.29
LITAF-207ENST00000571459 TRMT2AQ8IZ69 625 aaKnown RBP13.25□□□□□ -0.29
LITAF-207ENST00000571459 CHMP4AQ9BY43 222 aa13.25□□□□□ -0.29
LITAF-207ENST00000571459 SPON1Q9HCB6 807 aa13.25□□□□□ -0.29
LITAF-207ENST00000571459 DDX21Q9NR30 783 aaKnown RBP eCLIP13.25□□□□□ -0.29
LITAF-207ENST00000571459 CHPF2Q9P2E5 772 aa13.25□□□□□ -0.29
LITAF-207ENST00000571459 DBF4Q9UBU7 674 aaPredicted RBP13.25□□□□□ -0.29
LITAF-207ENST00000571459 C4AP0C0L4 1744 aa13.25□□□□□ -0.29
LITAF-207ENST00000571459 ZBED9Q6R2W3 1325 aa13.24□□□□□ -0.29
LITAF-207ENST00000571459 USP42Q9H9J4 1324 aaKnown RBP13.24□□□□□ -0.29
LITAF-207ENST00000571459 TCERG1O14776 1098 aaKnown RBP13.24□□□□□ -0.29
LITAF-207ENST00000571459 VAMP4O75379 141 aa13.24□□□□□ -0.29
LITAF-207ENST00000571459 GYS1P13807 737 aa13.24□□□□□ -0.29
LITAF-207ENST00000571459 DZIP3Q86Y13 1208 aaKnown RBP13.24□□□□□ -0.29
LITAF-207ENST00000571459 TTLL7Q6ZT98 887 aa13.23□□□□□ -0.29
LITAF-207ENST00000571459 LRP10Q7Z4F1 713 aa13.23□□□□□ -0.29
LITAF-207ENST00000571459 NLGN1Q8N2Q7 840 aa13.23□□□□□ -0.29
LITAF-207ENST00000571459 CAMTA2O94983 1202 aa13.22□□□□□ -0.29
LITAF-207ENST00000571459 AIMP1Q12904 312 aaKnown RBP13.22□□□□□ -0.29
LITAF-207ENST00000571459 FKBP8Q14318 412 aa13.22□□□□□ -0.29
LITAF-207ENST00000571459 COPS6Q7L5N1 327 aa13.22□□□□□ -0.29
LITAF-207ENST00000571459 XAGE3Q8WTP9 111 aa13.22□□□□□ -0.29
LITAF-207ENST00000571459 YTHDC1Q96MU7 727 aaKnown RBP13.22□□□□□ -0.29
LITAF-207ENST00000571459 STK31Q9BXU1 1019 aa13.22□□□□□ -0.29
LITAF-207ENST00000571459 HYPKQ9NX55 129 aa13.22□□□□□ -0.29
LITAF-207ENST00000571459 POLD1P28340 1107 aa13.21□□□□□ -0.29
LITAF-207ENST00000571459 PTGER2P43116 358 aa13.21□□□□□ -0.29
LITAF-207ENST00000571459 KIF6Q6ZMV9 814 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms