RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 STK11IPQ8N1F8 1099 aa24.47■■□□□ 1.51
SCRT1-201ENST00000569446 ISY1Q9ULR0 285 aaKnown RBP24.47■■□□□ 1.51
SCRT1-201ENST00000569446 LRRC7Q96NW7 1537 aa24.47■■□□□ 1.51
SCRT1-201ENST00000569446 AK2P54819 239 aa24.46■■□□□ 1.51
SCRT1-201ENST00000569446 HSP90AB4PQ58FF6 505 aa24.46■■□□□ 1.51
SCRT1-201ENST00000569446 ATP6V1DQ9Y5K8 247 aa24.46■■□□□ 1.51
SCRT1-201ENST00000569446 MROH2AA6NES4 1674 aa24.46■■□□□ 1.51
SCRT1-201ENST00000569446 EDC3Q96F86 508 aaKnown RBP24.46■■□□□ 1.51
SCRT1-201ENST00000569446 TTC12Q9H892 705 aaPredicted RBP24.45■■□□□ 1.51
SCRT1-201ENST00000569446 ADGRB1O14514 1584 aa24.45■■□□□ 1.5
SCRT1-201ENST00000569446 UQCRHLA0A096LP55 91 aa24.45■■□□□ 1.5
SCRT1-201ENST00000569446 UQCRHP07919 91 aa24.45■■□□□ 1.5
SCRT1-201ENST00000569446 TAF7LQ5H9L4 462 aa24.45■■□□□ 1.5
SCRT1-201ENST00000569446 NBPF6Q5VWK0 638 aa24.45■■□□□ 1.5
SCRT1-201ENST00000569446 NBPF4Q96M43 638 aa24.45■■□□□ 1.5
SCRT1-201ENST00000569446 CHRNA2Q15822 529 aa24.45■■□□□ 1.5
SCRT1-201ENST00000569446 MYD88Q99836 296 aa24.44■■□□□ 1.5
SCRT1-201ENST00000569446 MYOM1P52179 1685 aa24.44■■□□□ 1.5
SCRT1-201ENST00000569446 GJB2P29033 226 aa24.44■■□□□ 1.5
SCRT1-201ENST00000569446 GUCY1B3Q02153 619 aa24.44■■□□□ 1.5
SCRT1-201ENST00000569446 DNM1Q05193 864 aaKnown RBP24.44■■□□□ 1.5
SCRT1-201ENST00000569446 CABLES1Q8TDN4 633 aa24.44■■□□□ 1.5
SCRT1-201ENST00000569446 PIK3R4Q99570 1358 aa24.44■■□□□ 1.5
SCRT1-201ENST00000569446 FLT4P35916 1363 aa24.43■■□□□ 1.5
SCRT1-201ENST00000569446 KIDINS220Q9ULH0 1771 aa24.43■■□□□ 1.5
SCRT1-201ENST00000569446 NLRP1Q9C000 1473 aa24.43■■□□□ 1.5
SCRT1-201ENST00000569446 PNPLA6Q8IY17 1366 aa24.43■■□□□ 1.5
SCRT1-201ENST00000569446 SOS1Q07889 1333 aaPredicted RBP24.42■■□□□ 1.5
SCRT1-201ENST00000569446 CHAF1AQ13111 956 aaPredicted RBP24.42■■□□□ 1.5
SCRT1-201ENST00000569446 STX6O43752 255 aa24.42■■□□□ 1.5
SCRT1-201ENST00000569446 GLRX3O76003 335 aaKnown RBP24.42■■□□□ 1.5
SCRT1-201ENST00000569446 RAB11FIP4Q86YS3 637 aa24.42■■□□□ 1.5
SCRT1-201ENST00000569446 CCDC39Q9UFE4 941 aa24.42■■□□□ 1.5
SCRT1-201ENST00000569446 LIMCH1Q9UPQ0 1083 aa24.42■■□□□ 1.5
SCRT1-201ENST00000569446 NCBP3Q53F19 620 aaKnown RBP24.41■■□□□ 1.5
SCRT1-201ENST00000569446 FMNL2Q96PY5 1086 aa24.41■■□□□ 1.5
SCRT1-201ENST00000569446 LRSAM1Q6UWE0 723 aa24.41■■□□□ 1.5
SCRT1-201ENST00000569446 RASEFQ8IZ41 740 aa24.41■■□□□ 1.5
SCRT1-201ENST00000569446 DDX17Q92841 729 aaKnown RBP24.41■■□□□ 1.5
SCRT1-201ENST00000569446 BLOC1S2Q6QNY1 142 aa24.4■■□□□ 1.5
SCRT1-201ENST00000569446 PROSER2Q86WR7 435 aaPredicted RBP24.4■■□□□ 1.5
SCRT1-201ENST00000569446 INO80Q9ULG1 1556 aaPredicted RBP24.4■■□□□ 1.5
SCRT1-201ENST00000569446 TSC1Q92574 1164 aa24.4■■□□□ 1.5
SCRT1-201ENST00000569446 FAM227BQ96M60 508 aa24.4■■□□□ 1.5
SCRT1-201ENST00000569446 ORAI2Q96SN7 254 aa24.4■■□□□ 1.5
SCRT1-201ENST00000569446 ECHDC1Q9NTX5 307 aa24.39■■□□□ 1.5
SCRT1-201ENST00000569446 PROSER3Q2NL68 480 aa24.39■■□□□ 1.49
SCRT1-201ENST00000569446 TOMM22Q9NS69 142 aa24.39■■□□□ 1.49
SCRT1-201ENST00000569446 RNF20Q5VTR2 975 aa24.39■■□□□ 1.49
SCRT1-201ENST00000569446 HECW2Q9P2P5 1572 aa24.38■■□□□ 1.49
SCRT1-201ENST00000569446 UBE3BQ7Z3V4 1068 aa24.38■■□□□ 1.49
SCRT1-201ENST00000569446 DBF4Q9UBU7 674 aaPredicted RBP24.38■■□□□ 1.49
SCRT1-201ENST00000569446 SF3A1Q15459 793 aaKnown RBP24.38■■□□□ 1.49
SCRT1-201ENST00000569446 SYTL4Q96C24 671 aaPredicted RBP24.38■■□□□ 1.49
SCRT1-201ENST00000569446 IL25Q9H293 177 aa24.38■■□□□ 1.49
SCRT1-201ENST00000569446 PTPRMP28827 1452 aa24.38■■□□□ 1.49
SCRT1-201ENST00000569446 SETD1BQ9UPS6 1966 aaKnown RBP24.37■■□□□ 1.49
SCRT1-201ENST00000569446 SYT1P21579 422 aa24.37■■□□□ 1.49
SCRT1-201ENST00000569446 BRPF1P55201 1214 aaPredicted RBP24.37■■□□□ 1.49
SCRT1-201ENST00000569446 WASHC4Q2M389 1173 aa24.37■■□□□ 1.49
SCRT1-201ENST00000569446 GNL2Q13823 731 aaKnown RBP24.37■■□□□ 1.49
SCRT1-201ENST00000569446 DDX46Q7L014 1031 aaKnown RBP24.37■■□□□ 1.49
SCRT1-201ENST00000569446 TRIM5Q9C035 493 aa24.37■■□□□ 1.49
SCRT1-201ENST00000569446 ZDHHC9Q9Y397 364 aa24.37■■□□□ 1.49
SCRT1-201ENST00000569446 CAMSAP1Q5T5Y3 1602 aa24.36■■□□□ 1.49
SCRT1-201ENST00000569446 ADCY5O95622 1261 aa24.36■■□□□ 1.49
SCRT1-201ENST00000569446 APPP05067 770 aa24.35■■□□□ 1.49
SCRT1-201ENST00000569446 FKBP4Q02790 459 aaKnown RBP eCLIP24.35■■□□□ 1.49
SCRT1-201ENST00000569446 CCT2P78371 535 aaKnown RBP24.35■■□□□ 1.49
SCRT1-201ENST00000569446 ANKRD24Q8TF21 1146 aa24.35■■□□□ 1.49
SCRT1-201ENST00000569446 SNRKQ9NRH2 765 aa24.35■■□□□ 1.49
SCRT1-201ENST00000569446 NPHP1O15259 732 aa24.34■■□□□ 1.49
SCRT1-201ENST00000569446 PTH1RQ03431 593 aa24.34■■□□□ 1.49
SCRT1-201ENST00000569446 CSPP1Q1MSJ5 1256 aa24.34■■□□□ 1.49
SCRT1-201ENST00000569446 CHST3Q7LGC8 479 aa24.34■■□□□ 1.49
SCRT1-201ENST00000569446 PRDM10Q9NQV6 1147 aa24.34■■□□□ 1.49
SCRT1-201ENST00000569446 HDAC5Q9UQL6 1122 aa24.34■■□□□ 1.49
SCRT1-201ENST00000569446 RBM8AQ9Y5S9 174 aaKnown RBP24.34■■□□□ 1.49
SCRT1-201ENST00000569446 SNX14Q9Y5W7 946 aa24.34■■□□□ 1.49
SCRT1-201ENST00000569446 COPS6Q7L5N1 327 aa24.34■■□□□ 1.49
SCRT1-201ENST00000569446 TSPOAP1O95153 1857 aa24.34■■□□□ 1.49
SCRT1-201ENST00000569446 BECN2A8MW95 431 aa24.34■■□□□ 1.49
SCRT1-201ENST00000569446 NFATC2IPQ8NCF5 419 aa24.34■■□□□ 1.49
SCRT1-201ENST00000569446 CHMP4AQ9BY43 222 aa24.33■■□□□ 1.49
SCRT1-201ENST00000569446 STRN4Q9NRL3 753 aa24.33■■□□□ 1.49
SCRT1-201ENST00000569446 NRXN1Q9ULB1 1477 aa24.33■■□□□ 1.49
SCRT1-201ENST00000569446 PLEKHG3A1L390 1219 aa24.33■■□□□ 1.49
SCRT1-201ENST00000569446 ADCK5Q3MIX3 580 aa24.33■■□□□ 1.49
SCRT1-201ENST00000569446 PTCH1Q13635 1447 aa24.33■■□□□ 1.48
SCRT1-201ENST00000569446 ABCA9Q8IUA7 1624 aa24.32■■□□□ 1.48
SCRT1-201ENST00000569446 ZSCAN22P10073 491 aaPredicted RBP24.32■■□□□ 1.48
SCRT1-201ENST00000569446 CCDC129Q6ZRS4 1044 aa24.32■■□□□ 1.48
SCRT1-201ENST00000569446 XAGE3Q8WTP9 111 aa24.32■■□□□ 1.48
SCRT1-201ENST00000569446 NMIQ13287 307 aaPredicted RBP24.32■■□□□ 1.48
SCRT1-201ENST00000569446 BICC1Q9H694 974 aaKnown RBP24.31■■□□□ 1.48
SCRT1-201ENST00000569446 MAP3K5Q99683 1374 aa24.31■■□□□ 1.48
SCRT1-201ENST00000569446 GOLGA6L19H0YKK7 550 aa24.31■■□□□ 1.48
SCRT1-201ENST00000569446 SPATA32Q96LK8 384 aa24.31■■□□□ 1.48
SCRT1-201ENST00000569446 NEXMIFQ5QGS0 1516 aa24.31■■□□□ 1.48
SCRT1-201ENST00000569446 ANKLE2Q86XL3 938 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms