RNA–Protein interactions for RNA: ENST00000569276.1

TMEM170A-206, Transcript of transmembrane protein 170A, humanhuman

TSL 2 BASIC

Gene TMEM170A, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-206ENST00000569276 RTCBQ9Y3I0 505 aaKnown RBP29.83■■■□□ 2.37
TMEM170A-206ENST00000569276 PNPLA7Q6ZV29 1317 aa29.82■■■□□ 2.36
TMEM170A-206ENST00000569276 HOXB7P09629 217 aa29.82■■■□□ 2.36
TMEM170A-206ENST00000569276 TAF1LQ8IZX4 1826 aa29.82■■■□□ 2.36
TMEM170A-206ENST00000569276 PRAMEF22A3QJZ6 481 aa29.81■■■□□ 2.36
TMEM170A-206ENST00000569276 ADRA2BP18089 450 aa29.81■■■□□ 2.36
TMEM170A-206ENST00000569276 COL5A3P25940 1745 aaPredicted RBP29.8■■■□□ 2.36
TMEM170A-206ENST00000569276 MYH16Q9H6N6 1097 aa29.8■■■□□ 2.36
TMEM170A-206ENST00000569276 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.79■■■□□ 2.36
TMEM170A-206ENST00000569276 GOLGA2Q08379 1002 aa29.79■■■□□ 2.36
TMEM170A-206ENST00000569276 ZBTB1Q9Y2K1 713 aa29.79■■■□□ 2.36
TMEM170A-206ENST00000569276 TSR2Q969E8 191 aaKnown RBP29.78■■■□□ 2.36
TMEM170A-206ENST00000569276 SOS1Q07889 1333 aaPredicted RBP29.77■■■□□ 2.36
TMEM170A-206ENST00000569276 TRAPPC3LQ5T215 181 aa29.77■■■□□ 2.36
TMEM170A-206ENST00000569276 AMIGO3Q86WK7 504 aa29.77■■■□□ 2.36
TMEM170A-206ENST00000569276 FANCIQ9NVI1 1328 aa29.76■■■□□ 2.36
TMEM170A-206ENST00000569276 HNRNPUQ00839 825 aaKnown RBP eCLIP29.76■■■□□ 2.35
TMEM170A-206ENST00000569276 COL23A1Q86Y22 540 aaPredicted RBP29.76■■■□□ 2.35
TMEM170A-206ENST00000569276 SLC16A10Q8TF71 515 aa29.76■■■□□ 2.35
TMEM170A-206ENST00000569276 ERBB4Q15303 1308 aa29.75■■■□□ 2.35
TMEM170A-206ENST00000569276 PHF14O94880 888 aa29.75■■■□□ 2.35
TMEM170A-206ENST00000569276 A1BGP04217 495 aa29.75■■■□□ 2.35
TMEM170A-206ENST00000569276 IL6STP40189 918 aaPredicted RBP29.75■■■□□ 2.35
TMEM170A-206ENST00000569276 KRT24Q2M2I5 525 aa29.75■■■□□ 2.35
TMEM170A-206ENST00000569276 DUSP27Q5VZP5 1158 aa29.75■■■□□ 2.35
TMEM170A-206ENST00000569276 SPINK5Q9NQ38 1064 aaPredicted RBP29.75■■■□□ 2.35
TMEM170A-206ENST00000569276 E9PSI1 815 aa29.74■■■□□ 2.35
TMEM170A-206ENST00000569276 CANXP27824 592 aaKnown RBP29.74■■■□□ 2.35
TMEM170A-206ENST00000569276 CHMP4AQ9BY43 222 aa29.74■■■□□ 2.35
TMEM170A-206ENST00000569276 EIF5P55010 431 aaKnown RBP29.73■■■□□ 2.35
TMEM170A-206ENST00000569276 PDGFDQ9GZP0 370 aaPredicted RBP29.73■■■□□ 2.35
TMEM170A-206ENST00000569276 C8orf58Q8NAV2 365 aa29.72■■■□□ 2.35
TMEM170A-206ENST00000569276 ARHGEF1Q92888 912 aaKnown RBP29.71■■■□□ 2.35
TMEM170A-206ENST00000569276 QSER1Q2KHR3 1735 aa29.71■■■□□ 2.35
TMEM170A-206ENST00000569276 A0A087WZG4 1122 aa29.7■■■□□ 2.35
TMEM170A-206ENST00000569276 MSH5O43196 834 aa29.7■■■□□ 2.35
TMEM170A-206ENST00000569276 RFC4P35249 363 aa29.7■■■□□ 2.35
TMEM170A-206ENST00000569276 SMIM5Q71RC9 77 aa29.7■■■□□ 2.35
TMEM170A-206ENST00000569276 NPM2Q86SE8 214 aaKnown RBP29.7■■■□□ 2.35
TMEM170A-206ENST00000569276 COL15A1P39059 1388 aa29.69■■■□□ 2.34
TMEM170A-206ENST00000569276 NBPF26B4DH59 902 aa29.69■■■□□ 2.34
TMEM170A-206ENST00000569276 EIF2S2P20042 333 aaKnown RBP29.69■■■□□ 2.34
TMEM170A-206ENST00000569276 SLFN5Q08AF3 891 aa29.69■■■□□ 2.34
TMEM170A-206ENST00000569276 HDGFL1Q5TGJ6 251 aa29.69■■■□□ 2.34
TMEM170A-206ENST00000569276 NBPF10Q6P3W6 841 aaKnown RBP29.69■■■□□ 2.34
TMEM170A-206ENST00000569276 NBPF15Q8N660 670 aa29.69■■■□□ 2.34
TMEM170A-206ENST00000569276 MTFR1LQ9H019 292 aa29.69■■■□□ 2.34
TMEM170A-206ENST00000569276 MYH14Q7Z406 1995 aaKnown RBP29.68■■■□□ 2.34
TMEM170A-206ENST00000569276 UBR3Q6ZT12 1888 aa29.68■■■□□ 2.34
TMEM170A-206ENST00000569276 ELL2O00472 640 aaPredicted RBP29.66■■■□□ 2.34
TMEM170A-206ENST00000569276 TSPYL6Q8N831 410 aa29.66■■■□□ 2.34
TMEM170A-206ENST00000569276 ZBED9Q6R2W3 1325 aa29.66■■■□□ 2.34
TMEM170A-206ENST00000569276 LAMB4A4D0S4 1761 aa29.65■■■□□ 2.34
TMEM170A-206ENST00000569276 CASZ1Q86V15 1759 aa29.65■■■□□ 2.34
TMEM170A-206ENST00000569276 EXOSC9Q06265 439 aaKnown RBP29.65■■■□□ 2.34
TMEM170A-206ENST00000569276 TWISTNBQ3B726 338 aaPredicted RBP29.65■■■□□ 2.34
TMEM170A-206ENST00000569276 USP42Q9H9J4 1324 aaKnown RBP29.65■■■□□ 2.34
TMEM170A-206ENST00000569276 ZBTB7AO95365 584 aa29.64■■■□□ 2.34
TMEM170A-206ENST00000569276 PIP4K2AP48426 406 aaPredicted RBP29.64■■■□□ 2.34
TMEM170A-206ENST00000569276 TRMT2AQ8IZ69 625 aaKnown RBP29.64■■■□□ 2.34
TMEM170A-206ENST00000569276 CDCA7LQ96GN5 454 aa29.64■■■□□ 2.34
TMEM170A-206ENST00000569276 NARFQ9UHQ1 456 aa29.64■■■□□ 2.34
TMEM170A-206ENST00000569276 PDIA6Q15084 440 aa29.63■■■□□ 2.33
TMEM170A-206ENST00000569276 SPON1Q9HCB6 807 aa29.63■■■□□ 2.33
TMEM170A-206ENST00000569276 DDX21Q9NR30 783 aaKnown RBP eCLIP29.63■■■□□ 2.33
TMEM170A-206ENST00000569276 DBF4Q9UBU7 674 aaPredicted RBP29.63■■■□□ 2.33
TMEM170A-206ENST00000569276 ZNF330Q9Y3S2 320 aaPredicted RBP29.63■■■□□ 2.33
TMEM170A-206ENST00000569276 TUBGCP6Q96RT7 1819 aa29.63■■■□□ 2.33
TMEM170A-206ENST00000569276 ZPR1O75312 459 aa29.62■■■□□ 2.33
TMEM170A-206ENST00000569276 CCDC30Q5VVM6 783 aa29.61■■■□□ 2.33
TMEM170A-206ENST00000569276 NECTIN2Q92692 538 aa29.61■■■□□ 2.33
TMEM170A-206ENST00000569276 RGL2O15211 777 aa29.6■■■□□ 2.33
TMEM170A-206ENST00000569276 MYL6BP14649 208 aa29.6■■■□□ 2.33
TMEM170A-206ENST00000569276 LRP10Q7Z4F1 713 aa29.6■■■□□ 2.33
TMEM170A-206ENST00000569276 NLGN1Q8N2Q7 840 aa29.6■■■□□ 2.33
TMEM170A-206ENST00000569276 CHPF2Q9P2E5 772 aa29.6■■■□□ 2.33
TMEM170A-206ENST00000569276 VAMP4O75379 141 aa29.59■■■□□ 2.33
TMEM170A-206ENST00000569276 GYS1P13807 737 aa29.59■■■□□ 2.33
TMEM170A-206ENST00000569276 DZIP3Q86Y13 1208 aaKnown RBP29.59■■■□□ 2.33
TMEM170A-206ENST00000569276 PROSER3Q2NL68 480 aa29.58■■■□□ 2.33
TMEM170A-206ENST00000569276 HYPKQ9NX55 129 aa29.58■■■□□ 2.33
TMEM170A-206ENST00000569276 SRP68Q9UHB9 627 aaKnown RBP29.58■■■□□ 2.33
TMEM170A-206ENST00000569276 TBC1D2BQ9UPU7 963 aa29.58■■■□□ 2.33
TMEM170A-206ENST00000569276 ATF5Q9Y2D1 282 aaPredicted RBP29.58■■■□□ 2.33
TMEM170A-206ENST00000569276 USPL1Q5W0Q7 1092 aa29.57■■■□□ 2.32
TMEM170A-206ENST00000569276 CAMTA2O94983 1202 aa29.55■■■□□ 2.32
TMEM170A-206ENST00000569276 POLD1P28340 1107 aa29.55■■■□□ 2.32
TMEM170A-206ENST00000569276 ARXQ96QS3 562 aa29.55■■■□□ 2.32
TMEM170A-206ENST00000569276 STK31Q9BXU1 1019 aa29.55■■■□□ 2.32
TMEM170A-206ENST00000569276 ANXA1P04083 346 aa29.54■■■□□ 2.32
TMEM170A-206ENST00000569276 PTGER2P43116 358 aa29.54■■■□□ 2.32
TMEM170A-206ENST00000569276 MSL1Q68DK7 614 aa29.54■■■□□ 2.32
TMEM170A-206ENST00000569276 KIF6Q6ZMV9 814 aa29.54■■■□□ 2.32
TMEM170A-206ENST00000569276 SGIP1Q9BQI5 828 aa29.54■■■□□ 2.32
TMEM170A-206ENST00000569276 ERVV-1B6SEH8 477 aa29.53■■■□□ 2.32
TMEM170A-206ENST00000569276 CT47B1P0C2W7 299 aaPredicted RBP29.53■■■□□ 2.32
TMEM170A-206ENST00000569276 CLEC4GQ6UXB4 293 aa29.53■■■□□ 2.32
TMEM170A-206ENST00000569276 ZNF428Q96B54 188 aa29.53■■■□□ 2.32
TMEM170A-206ENST00000569276 BCL2L12Q9HB09 334 aa29.53■■■□□ 2.32
TMEM170A-206ENST00000569276 FKBP8Q14318 412 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms