RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 RPS6KA4O75676 772 aa16.74■□□□□ 0.27
CDT1-203ENST00000569140 RFC4P35249 363 aa16.74■□□□□ 0.27
CDT1-203ENST00000569140 SLC16A10Q8TF71 515 aa16.74■□□□□ 0.27
CDT1-203ENST00000569140 TEX13AQ9BXU3 409 aaPredicted RBP16.74■□□□□ 0.27
CDT1-203ENST00000569140 PRAMEF22A3QJZ6 481 aa16.73■□□□□ 0.27
CDT1-203ENST00000569140 SNRPA1P09661 255 aaKnown RBP16.73■□□□□ 0.27
CDT1-203ENST00000569140 POLD1P28340 1107 aa16.73■□□□□ 0.27
CDT1-203ENST00000569140 INTS5Q6P9B9 1019 aaKnown RBP16.73■□□□□ 0.27
CDT1-203ENST00000569140 ZBTB1Q9Y2K1 713 aa16.73■□□□□ 0.27
CDT1-203ENST00000569140 MYH14Q7Z406 1995 aaKnown RBP16.72■□□□□ 0.27
CDT1-203ENST00000569140 CCER2I3L3R5 266 aa16.72■□□□□ 0.27
CDT1-203ENST00000569140 CALD1Q05682 793 aaKnown RBP16.72■□□□□ 0.27
CDT1-203ENST00000569140 NPM2Q86SE8 214 aaKnown RBP16.72■□□□□ 0.27
CDT1-203ENST00000569140 MIER1Q8N108 512 aa16.72■□□□□ 0.27
CDT1-203ENST00000569140 KLHL34Q8N239 644 aa16.72■□□□□ 0.27
CDT1-203ENST00000569140 ARXQ96QS3 562 aa16.72■□□□□ 0.27
CDT1-203ENST00000569140 ADRA2BP18089 450 aa16.71■□□□□ 0.27
CDT1-203ENST00000569140 EIF4A1P60842 406 aaKnown RBP16.71■□□□□ 0.27
CDT1-203ENST00000569140 ARHGEF1Q92888 912 aaKnown RBP16.71■□□□□ 0.27
CDT1-203ENST00000569140 USP16Q9Y5T5 823 aa16.71■□□□□ 0.27
CDT1-203ENST00000569140 C4AP0C0L4 1744 aa16.7■□□□□ 0.26
CDT1-203ENST00000569140 LAMB4A4D0S4 1761 aa16.7■□□□□ 0.26
CDT1-203ENST00000569140 COL15A1P39059 1388 aa16.7■□□□□ 0.26
CDT1-203ENST00000569140 PIP4K2AP48426 406 aaPredicted RBP16.7■□□□□ 0.26
CDT1-203ENST00000569140 SOS1Q07889 1333 aaPredicted RBP16.7■□□□□ 0.26
CDT1-203ENST00000569140 A1BGP04217 495 aa16.69■□□□□ 0.26
CDT1-203ENST00000569140 BABAM1Q9NWV8 329 aa16.69■□□□□ 0.26
CDT1-203ENST00000569140 ZPR1O75312 459 aa16.68■□□□□ 0.26
CDT1-203ENST00000569140 PTGER2P43116 358 aa16.68■□□□□ 0.26
CDT1-203ENST00000569140 SRP68Q9UHB9 627 aaKnown RBP16.68■□□□□ 0.26
CDT1-203ENST00000569140 CHL1O00533 1208 aa16.67■□□□□ 0.26
CDT1-203ENST00000569140 GIGYF1O75420 1035 aaPredicted RBP16.67■□□□□ 0.26
CDT1-203ENST00000569140 EIF2S2P20042 333 aaKnown RBP16.67■□□□□ 0.26
CDT1-203ENST00000569140 GNAI1P63096 354 aa16.67■□□□□ 0.26
CDT1-203ENST00000569140 CFAP44Q96MT7 982 aa16.67■□□□□ 0.26
CDT1-203ENST00000569140 MBIPQ9NS73 344 aa16.67■□□□□ 0.26
CDT1-203ENST00000569140 USPL1Q5W0Q7 1092 aa16.66■□□□□ 0.26
CDT1-203ENST00000569140 WWC1Q8IX03 1113 aa16.66■□□□□ 0.26
CDT1-203ENST00000569140 NECTIN2Q92692 538 aa16.66■□□□□ 0.26
CDT1-203ENST00000569140 IFT57Q9NWB7 429 aa16.66■□□□□ 0.26
CDT1-203ENST00000569140 USP42Q9H9J4 1324 aaKnown RBP16.66■□□□□ 0.26
CDT1-203ENST00000569140 A0A087WZG4 1122 aa16.65■□□□□ 0.26
CDT1-203ENST00000569140 CCDC27Q2M243 656 aa16.65■□□□□ 0.26
CDT1-203ENST00000569140 KRT24Q2M2I5 525 aa16.65■□□□□ 0.26
CDT1-203ENST00000569140 NGEFQ8N5V2 710 aa16.65■□□□□ 0.26
CDT1-203ENST00000569140 GYS1P13807 737 aa16.64■□□□□ 0.25
CDT1-203ENST00000569140 MYL6BP14649 208 aa16.64■□□□□ 0.25
CDT1-203ENST00000569140 IL6STP40189 918 aaPredicted RBP16.64■□□□□ 0.25
CDT1-203ENST00000569140 SGIP1Q9BQI5 828 aa16.64■□□□□ 0.25
CDT1-203ENST00000569140 TBC1D2BQ9UPU7 963 aa16.64■□□□□ 0.25
CDT1-203ENST00000569140 MMP10P09238 476 aa16.63■□□□□ 0.25
CDT1-203ENST00000569140 EIF5P55010 431 aaKnown RBP16.63■□□□□ 0.25
CDT1-203ENST00000569140 NLGN1Q8N2Q7 840 aa16.63■□□□□ 0.25
CDT1-203ENST00000569140 TSR2Q969E8 191 aaKnown RBP16.63■□□□□ 0.25
CDT1-203ENST00000569140 FHDC1Q9C0D6 1143 aaPredicted RBP16.63■□□□□ 0.25
CDT1-203ENST00000569140 NARFQ9UHQ1 456 aa16.63■□□□□ 0.25
CDT1-203ENST00000569140 COL24A1Q17RW2 1714 aa16.62■□□□□ 0.25
CDT1-203ENST00000569140 DZIP3Q86Y13 1208 aaKnown RBP16.62■□□□□ 0.25
CDT1-203ENST00000569140 NBPF26B4DH59 902 aa16.61■□□□□ 0.25
CDT1-203ENST00000569140 ELL2O00472 640 aaPredicted RBP16.61■□□□□ 0.25
CDT1-203ENST00000569140 ZNF853P0CG23 659 aa16.61■□□□□ 0.25
CDT1-203ENST00000569140 FKBP8Q14318 412 aa16.61■□□□□ 0.25
CDT1-203ENST00000569140 NBPF10Q6P3W6 841 aaKnown RBP16.61■□□□□ 0.25
CDT1-203ENST00000569140 BICDL1Q6ZP65 573 aa16.61■□□□□ 0.25
CDT1-203ENST00000569140 NBPF15Q8N660 670 aa16.61■□□□□ 0.25
CDT1-203ENST00000569140 PARP3Q9Y6F1 533 aa16.61■□□□□ 0.25
CDT1-203ENST00000569140 SCN7AQ01118 1682 aa16.6■□□□□ 0.25
CDT1-203ENST00000569140 HDGFL1Q5TGJ6 251 aa16.6■□□□□ 0.25
CDT1-203ENST00000569140 DUSP27Q5VZP5 1158 aa16.6■□□□□ 0.25
CDT1-203ENST00000569140 WDR63Q8IWG1 891 aa16.59■□□□□ 0.25
CDT1-203ENST00000569140 ANXA1P04083 346 aa16.58■□□□□ 0.24
CDT1-203ENST00000569140 NCBP3Q53F19 620 aaKnown RBP16.58■□□□□ 0.24
CDT1-203ENST00000569140 KIF6Q6ZMV9 814 aa16.58■□□□□ 0.24
CDT1-203ENST00000569140 IL16Q14005 1332 aa16.58■□□□□ 0.24
CDT1-203ENST00000569140 BCORQ6W2J9 1755 aa16.57■□□□□ 0.24
CDT1-203ENST00000569140 ERBB4Q15303 1308 aa16.57■□□□□ 0.24
CDT1-203ENST00000569140 NPHP1O15259 732 aa16.57■□□□□ 0.24
CDT1-203ENST00000569140 FANCIQ9NVI1 1328 aa16.56■□□□□ 0.24
CDT1-203ENST00000569140 CAMTA2O94983 1202 aa16.56■□□□□ 0.24
CDT1-203ENST00000569140 HOXB7P09629 217 aa16.56■□□□□ 0.24
CDT1-203ENST00000569140 PROSER3Q2NL68 480 aa16.56■□□□□ 0.24
CDT1-203ENST00000569140 C8orf58Q8NAV2 365 aa16.56■□□□□ 0.24
CDT1-203ENST00000569140 SYT17Q9BSW7 474 aa16.56■□□□□ 0.24
CDT1-203ENST00000569140 BCL2L12Q9HB09 334 aa16.56■□□□□ 0.24
CDT1-203ENST00000569140 CHPF2Q9P2E5 772 aa16.56■□□□□ 0.24
CDT1-203ENST00000569140 ZNF652Q9Y2D9 606 aa16.56■□□□□ 0.24
CDT1-203ENST00000569140 DDR1Q08345 913 aa16.55■□□□□ 0.24
CDT1-203ENST00000569140 AIMP1Q12904 312 aaKnown RBP16.55■□□□□ 0.24
CDT1-203ENST00000569140 NFIXQ14938 502 aa16.55■□□□□ 0.24
CDT1-203ENST00000569140 TBC1D9BQ66K14 1250 aa16.55■□□□□ 0.24
CDT1-203ENST00000569140 PELP1Q8IZL8 1130 aaKnown RBP16.55■□□□□ 0.24
CDT1-203ENST00000569140 ZBTB3Q9H5J0 574 aa16.55■□□□□ 0.24
CDT1-203ENST00000569140 MYH16Q9H6N6 1097 aa16.55■□□□□ 0.24
CDT1-203ENST00000569140 DCAF8L1A6NGE4 600 aa16.54■□□□□ 0.24
CDT1-203ENST00000569140 GOLGA2Q08379 1002 aa16.54■□□□□ 0.24
CDT1-203ENST00000569140 TTLL7Q6ZT98 887 aa16.54■□□□□ 0.24
CDT1-203ENST00000569140 TSPYL6Q8N831 410 aa16.54■□□□□ 0.24
CDT1-203ENST00000569140 NLGN2Q8NFZ4 835 aa16.54■□□□□ 0.24
CDT1-203ENST00000569140 SRCAPQ6ZRS2 3230 aa16.53■□□□□ 0.24
CDT1-203ENST00000569140 POLRMTO00411 1230 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms