RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 USP44Q9H0E7 712 aa20.78■□□□□ 0.92
VAC14-210ENST00000568548 PHF8Q9UPP1 1060 aa20.78■□□□□ 0.92
VAC14-210ENST00000568548 CRB1P82279 1406 aa20.78■□□□□ 0.92
VAC14-210ENST00000568548 DNTTIP2Q5QJE6 756 aaKnown RBP20.77■□□□□ 0.92
VAC14-210ENST00000568548 LRSAM1Q6UWE0 723 aa20.77■□□□□ 0.92
VAC14-210ENST00000568548 IL17REQ8NFR9 667 aa20.77■□□□□ 0.92
VAC14-210ENST00000568548 USP48Q86UV5 1035 aa20.77■□□□□ 0.92
VAC14-210ENST00000568548 TSC1Q92574 1164 aa20.77■□□□□ 0.92
VAC14-210ENST00000568548 NPHP4O75161 1426 aaPredicted RBP20.77■□□□□ 0.92
VAC14-210ENST00000568548 SBNO1A3KN83 1393 aa20.77■□□□□ 0.92
VAC14-210ENST00000568548 FLT4P35916 1363 aa20.77■□□□□ 0.92
VAC14-210ENST00000568548 HAP1P54257 671 aaPredicted RBP20.77■□□□□ 0.91
VAC14-210ENST00000568548 PPP1R42Q7Z4L9 355 aa20.77■□□□□ 0.91
VAC14-210ENST00000568548 NBPF7P0C2Y1 421 aaPredicted RBP20.76■□□□□ 0.91
VAC14-210ENST00000568548 UBTFL1P0CB47 393 aaPredicted RBP20.76■□□□□ 0.91
VAC14-210ENST00000568548 OFD1O75665 1012 aa20.76■□□□□ 0.91
VAC14-210ENST00000568548 KCNQ3O43525 872 aa20.75■□□□□ 0.91
VAC14-210ENST00000568548 ATP8B2P98198 1209 aa20.75■□□□□ 0.91
VAC14-210ENST00000568548 CNPY2Q9Y2B0 182 aa20.75■□□□□ 0.91
VAC14-210ENST00000568548 FAM177BA6PVY3 158 aa20.75■□□□□ 0.91
VAC14-210ENST00000568548 BRD1O95696 1058 aa20.75■□□□□ 0.91
VAC14-210ENST00000568548 TPM2P07951 284 aa20.75■□□□□ 0.91
VAC14-210ENST00000568548 MCCP23508 829 aa20.75■□□□□ 0.91
VAC14-210ENST00000568548 RASEFQ8IZ41 740 aa20.75■□□□□ 0.91
VAC14-210ENST00000568548 SRGAP3O43295 1099 aa20.74■□□□□ 0.91
VAC14-210ENST00000568548 HDGFL1Q5TGJ6 251 aa20.74■□□□□ 0.91
VAC14-210ENST00000568548 UQCRHLA0A096LP55 91 aa20.74■□□□□ 0.91
VAC14-210ENST00000568548 UQCRHP07919 91 aa20.74■□□□□ 0.91
VAC14-210ENST00000568548 ESCO1Q5FWF5 840 aa20.74■□□□□ 0.91
VAC14-210ENST00000568548 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.74■□□□□ 0.91
VAC14-210ENST00000568548 FIBPO43427 364 aa20.74■□□□□ 0.91
VAC14-210ENST00000568548 CCDC30Q5VVM6 783 aa20.74■□□□□ 0.91
VAC14-210ENST00000568548 KIAA0232Q92628 1395 aa20.73■□□□□ 0.91
VAC14-210ENST00000568548 RGPD1P0DJD0 1748 aa20.73■□□□□ 0.91
VAC14-210ENST00000568548 OS9Q13438 667 aaPredicted RBP20.73■□□□□ 0.91
VAC14-210ENST00000568548 KIF24Q5T7B8 1368 aa20.72■□□□□ 0.91
VAC14-210ENST00000568548 OSBPL3Q9H4L5 887 aa20.72■□□□□ 0.91
VAC14-210ENST00000568548 USP25Q9UHP3 1055 aa20.72■□□□□ 0.91
VAC14-210ENST00000568548 GNAI3P08754 354 aa20.72■□□□□ 0.91
VAC14-210ENST00000568548 COL9A3Q14050 684 aaPredicted RBP20.72■□□□□ 0.91
VAC14-210ENST00000568548 NOL7Q9UMY1 257 aaKnown RBP20.72■□□□□ 0.91
VAC14-210ENST00000568548 ADGRL3Q9HAR2 1447 aa20.72■□□□□ 0.91
VAC14-210ENST00000568548 ARHGEF10O15013 1369 aa20.72■□□□□ 0.91
VAC14-210ENST00000568548 GNAT3A8MTJ3 354 aa20.71■□□□□ 0.91
VAC14-210ENST00000568548 LGR6Q9HBX8 967 aa20.71■□□□□ 0.91
VAC14-210ENST00000568548 TAF7Q15545 349 aaPredicted RBP20.71■□□□□ 0.91
VAC14-210ENST00000568548 TCEANC2Q96MN5 208 aa20.71■□□□□ 0.91
VAC14-210ENST00000568548 SRCIN1Q9C0H9 1055 aa20.71■□□□□ 0.91
VAC14-210ENST00000568548 SOS1Q07889 1333 aaPredicted RBP20.71■□□□□ 0.91
VAC14-210ENST00000568548 PSME1Q06323 249 aa20.7■□□□□ 0.9
VAC14-210ENST00000568548 TSPY26PQ9H489 355 aa20.7■□□□□ 0.9
VAC14-210ENST00000568548 SALL3Q9BXA9 1300 aa20.7■□□□□ 0.9
VAC14-210ENST00000568548 LARGE1O95461 756 aa20.7■□□□□ 0.9
VAC14-210ENST00000568548 PA2G4Q9UQ80 394 aaKnown RBP20.7■□□□□ 0.9
VAC14-210ENST00000568548 HCLS1P14317 486 aaPredicted RBP20.69■□□□□ 0.9
VAC14-210ENST00000568548 HOXC9P31274 260 aa20.69■□□□□ 0.9
VAC14-210ENST00000568548 PDLIM2Q96JY6 352 aa20.69■□□□□ 0.9
VAC14-210ENST00000568548 TTC12Q9H892 705 aaPredicted RBP20.69■□□□□ 0.9
VAC14-210ENST00000568548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.69■□□□□ 0.9
VAC14-210ENST00000568548 PI4KAP2A4QPH2 592 aa20.69■□□□□ 0.9
VAC14-210ENST00000568548 PI4KAP1Q8N8J0 262 aa20.69■□□□□ 0.9
VAC14-210ENST00000568548 MARF1Q9Y4F3 1742 aaKnown RBP20.68■□□□□ 0.9
VAC14-210ENST00000568548 CHPF2Q9P2E5 772 aa20.68■□□□□ 0.9
VAC14-210ENST00000568548 ZKSCAN5Q9Y2L8 839 aa20.68■□□□□ 0.9
VAC14-210ENST00000568548 AK2P54819 239 aa20.68■□□□□ 0.9
VAC14-210ENST00000568548 FAM173BQ6P4H8 233 aa20.68■□□□□ 0.9
VAC14-210ENST00000568548 IBTKQ9P2D0 1353 aaPredicted RBP20.68■□□□□ 0.9
VAC14-210ENST00000568548 NECAB1Q8N987 351 aa20.67■□□□□ 0.9
VAC14-210ENST00000568548 RHPN1Q8TCX5 695 aa20.67■□□□□ 0.9
VAC14-210ENST00000568548 IGSF1Q8N6C5 1336 aa20.67■□□□□ 0.9
VAC14-210ENST00000568548 CCDC83Q8IWF9 413 aa20.67■□□□□ 0.9
VAC14-210ENST00000568548 BCL11BQ9C0K0 894 aaPredicted RBP20.67■□□□□ 0.9
VAC14-210ENST00000568548 GIMAP6Q6P9H5 292 aa20.67■□□□□ 0.9
VAC14-210ENST00000568548 FERMT3Q86UX7 667 aa20.67■□□□□ 0.9
VAC14-210ENST00000568548 CASTP20810 708 aaKnown RBP20.66■□□□□ 0.9
VAC14-210ENST00000568548 CUL4AQ13619 759 aa20.66■□□□□ 0.9
VAC14-210ENST00000568548 SNX14Q9Y5W7 946 aa20.66■□□□□ 0.9
VAC14-210ENST00000568548 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.66■□□□□ 0.9
VAC14-210ENST00000568548 ADCK5Q3MIX3 580 aa20.66■□□□□ 0.9
VAC14-210ENST00000568548 ORAI2Q96SN7 254 aa20.66■□□□□ 0.9
VAC14-210ENST00000568548 KDRP35968 1356 aa20.65■□□□□ 0.9
VAC14-210ENST00000568548 PRAMEF22A3QJZ6 481 aa20.65■□□□□ 0.9
VAC14-210ENST00000568548 MPRIPQ6WCQ1 1025 aa20.65■□□□□ 0.9
VAC14-210ENST00000568548 PROSER2Q86WR7 435 aaPredicted RBP20.65■□□□□ 0.9
VAC14-210ENST00000568548 MBD3O95983 291 aa20.64■□□□□ 0.9
VAC14-210ENST00000568548 PTH1RQ03431 593 aa20.64■□□□□ 0.9
VAC14-210ENST00000568548 RUFY3Q7L099 469 aa20.64■□□□□ 0.9
VAC14-210ENST00000568548 PRDM10Q9NQV6 1147 aa20.64■□□□□ 0.9
VAC14-210ENST00000568548 VPS37CA5D8V6 355 aaPredicted RBP20.64■□□□□ 0.89
VAC14-210ENST00000568548 PRPF40BQ6NWY9 871 aaKnown RBP20.64■□□□□ 0.89
VAC14-210ENST00000568548 LRRC59Q96AG4 307 aaKnown RBP20.64■□□□□ 0.89
VAC14-210ENST00000568548 PDCL3Q9H2J4 239 aa20.64■□□□□ 0.89
VAC14-210ENST00000568548 CCDC9Q9Y3X0 531 aaKnown RBP20.64■□□□□ 0.89
VAC14-210ENST00000568548 SYT1P21579 422 aa20.64■□□□□ 0.89
VAC14-210ENST00000568548 LMOD2Q6P5Q4 547 aa20.63■□□□□ 0.89
VAC14-210ENST00000568548 PI4K2BQ8TCG2 481 aa20.63■□□□□ 0.89
VAC14-210ENST00000568548 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.63■□□□□ 0.89
VAC14-210ENST00000568548 AIMP1Q12904 312 aaKnown RBP20.63■□□□□ 0.89
VAC14-210ENST00000568548 HSPA4P34932 840 aa20.62■□□□□ 0.89
VAC14-210ENST00000568548 DNM1Q05193 864 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms