RNA–Protein interactions for RNA: ENST00000567339.1

GGA2-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 3

Gene GGA2, Length 293 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-210ENST00000567339 MYH16Q9H6N6 1097 aa12.82□□□□□ -0.36
GGA2-210ENST00000567339 MBIPQ9NS73 344 aa12.82□□□□□ -0.36
GGA2-210ENST00000567339 LAS1LQ9Y4W2 734 aaKnown RBP12.82□□□□□ -0.36
GGA2-210ENST00000567339 ERBB4Q15303 1308 aa12.82□□□□□ -0.36
GGA2-210ENST00000567339 ZNF521Q96K83 1311 aa12.82□□□□□ -0.36
GGA2-210ENST00000567339 PNPLA7Q6ZV29 1317 aa12.81□□□□□ -0.36
GGA2-210ENST00000567339 INTS5Q6P9B9 1019 aaKnown RBP12.8□□□□□ -0.36
GGA2-210ENST00000567339 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.79□□□□□ -0.36
GGA2-210ENST00000567339 IL6STP40189 918 aaPredicted RBP12.79□□□□□ -0.36
GGA2-210ENST00000567339 GOLGA2Q08379 1002 aa12.79□□□□□ -0.36
GGA2-210ENST00000567339 TRAPPC3LQ5T215 181 aa12.79□□□□□ -0.36
GGA2-210ENST00000567339 NPM2Q86SE8 214 aaKnown RBP12.79□□□□□ -0.36
GGA2-210ENST00000567339 SALL2Q9Y467 1007 aaPredicted RBP12.79□□□□□ -0.36
GGA2-210ENST00000567339 LAMB4A4D0S4 1761 aa12.79□□□□□ -0.36
GGA2-210ENST00000567339 A0A087WZG4 1122 aa12.78□□□□□ -0.36
GGA2-210ENST00000567339 PSDA5PKW4 1024 aaPredicted RBP12.78□□□□□ -0.36
GGA2-210ENST00000567339 E9PSI1 815 aa12.78□□□□□ -0.36
GGA2-210ENST00000567339 MTFR1LQ9H019 292 aa12.78□□□□□ -0.36
GGA2-210ENST00000567339 ZBTB1Q9Y2K1 713 aa12.78□□□□□ -0.36
GGA2-210ENST00000567339 USP16Q9Y5T5 823 aa12.78□□□□□ -0.36
GGA2-210ENST00000567339 UBR3Q6ZT12 1888 aa12.78□□□□□ -0.36
GGA2-210ENST00000567339 RGL2O15211 777 aa12.77□□□□□ -0.37
GGA2-210ENST00000567339 FANCIQ9NVI1 1328 aa12.77□□□□□ -0.37
GGA2-210ENST00000567339 COL15A1P39059 1388 aa12.77□□□□□ -0.37
GGA2-210ENST00000567339 CASZ1Q86V15 1759 aa12.76□□□□□ -0.37
GGA2-210ENST00000567339 PHF14O94880 888 aa12.76□□□□□ -0.37
GGA2-210ENST00000567339 RFC4P35249 363 aa12.76□□□□□ -0.37
GGA2-210ENST00000567339 EIF5P55010 431 aaKnown RBP12.76□□□□□ -0.37
GGA2-210ENST00000567339 HNRNPUQ00839 825 aaKnown RBP eCLIP12.76□□□□□ -0.37
GGA2-210ENST00000567339 DUSP27Q5VZP5 1158 aa12.76□□□□□ -0.37
GGA2-210ENST00000567339 COL23A1Q86Y22 540 aaPredicted RBP12.76□□□□□ -0.37
GGA2-210ENST00000567339 MYH14Q7Z406 1995 aaKnown RBP12.76□□□□□ -0.37
GGA2-210ENST00000567339 SENP3-EIF4A1A0A087X0R7 540 aa12.75□□□□□ -0.37
GGA2-210ENST00000567339 PRAMEF22A3QJZ6 481 aa12.75□□□□□ -0.37
GGA2-210ENST00000567339 MSH5O43196 834 aa12.75□□□□□ -0.37
GGA2-210ENST00000567339 CANXP27824 592 aaKnown RBP12.75□□□□□ -0.37
GGA2-210ENST00000567339 HDGFL1Q5TGJ6 251 aa12.75□□□□□ -0.37
GGA2-210ENST00000567339 ZBED9Q6R2W3 1325 aa12.75□□□□□ -0.37
GGA2-210ENST00000567339 ARHGEF1Q92888 912 aaKnown RBP12.75□□□□□ -0.37
GGA2-210ENST00000567339 TSR2Q969E8 191 aaKnown RBP12.75□□□□□ -0.37
GGA2-210ENST00000567339 TUBGCP6Q96RT7 1819 aa12.75□□□□□ -0.37
GGA2-210ENST00000567339 SPON1Q9HCB6 807 aa12.75□□□□□ -0.37
GGA2-210ENST00000567339 USP42Q9H9J4 1324 aaKnown RBP12.74□□□□□ -0.37
GGA2-210ENST00000567339 ZPR1O75312 459 aa12.74□□□□□ -0.37
GGA2-210ENST00000567339 A1BGP04217 495 aa12.74□□□□□ -0.37
GGA2-210ENST00000567339 NLGN1Q8N2Q7 840 aa12.74□□□□□ -0.37
GGA2-210ENST00000567339 SLFN5Q08AF3 891 aa12.73□□□□□ -0.37
GGA2-210ENST00000567339 TWISTNBQ3B726 338 aaPredicted RBP12.73□□□□□ -0.37
GGA2-210ENST00000567339 CCDC30Q5VVM6 783 aa12.73□□□□□ -0.37
GGA2-210ENST00000567339 AMIGO3Q86WK7 504 aa12.73□□□□□ -0.37
GGA2-210ENST00000567339 DDX21Q9NR30 783 aaKnown RBP eCLIP12.73□□□□□ -0.37
GGA2-210ENST00000567339 DBF4Q9UBU7 674 aaPredicted RBP12.73□□□□□ -0.37
GGA2-210ENST00000567339 NARFQ9UHQ1 456 aa12.73□□□□□ -0.37
GGA2-210ENST00000567339 NBPF26B4DH59 902 aa12.72□□□□□ -0.37
GGA2-210ENST00000567339 CT47B1P0C2W7 299 aaPredicted RBP12.72□□□□□ -0.37
GGA2-210ENST00000567339 EIF2S2P20042 333 aaKnown RBP12.72□□□□□ -0.37
GGA2-210ENST00000567339 POLD1P28340 1107 aa12.72□□□□□ -0.37
GGA2-210ENST00000567339 KRT24Q2M2I5 525 aa12.72□□□□□ -0.37
GGA2-210ENST00000567339 NBPF10Q6P3W6 841 aaKnown RBP12.72□□□□□ -0.37
GGA2-210ENST00000567339 NBPF15Q8N660 670 aa12.72□□□□□ -0.37
GGA2-210ENST00000567339 C8orf58Q8NAV2 365 aa12.72□□□□□ -0.37
GGA2-210ENST00000567339 ZNF428Q96B54 188 aa12.72□□□□□ -0.37
GGA2-210ENST00000567339 HYPKQ9NX55 129 aa12.72□□□□□ -0.37
GGA2-210ENST00000567339 ZNF652Q9Y2D9 606 aa12.72□□□□□ -0.37
GGA2-210ENST00000567339 LRP5O75197 1615 aa12.71□□□□□ -0.37
GGA2-210ENST00000567339 ZBTB7AO95365 584 aa12.71□□□□□ -0.37
GGA2-210ENST00000567339 CLEC4GQ6UXB4 293 aa12.71□□□□□ -0.37
GGA2-210ENST00000567339 DZIP3Q86Y13 1208 aaKnown RBP12.71□□□□□ -0.37
GGA2-210ENST00000567339 STK31Q9BXU1 1019 aa12.71□□□□□ -0.37
GGA2-210ENST00000567339 PDGFDQ9GZP0 370 aaPredicted RBP12.71□□□□□ -0.37
GGA2-210ENST00000567339 SPINK5Q9NQ38 1064 aaPredicted RBP12.71□□□□□ -0.37
GGA2-210ENST00000567339 ZNF330Q9Y3S2 320 aaPredicted RBP12.71□□□□□ -0.37
GGA2-210ENST00000567339 C4AP0C0L4 1744 aa12.71□□□□□ -0.38
GGA2-210ENST00000567339 ERVV-1B6SEH8 477 aa12.7□□□□□ -0.38
GGA2-210ENST00000567339 GYS1P13807 737 aa12.7□□□□□ -0.38
GGA2-210ENST00000567339 PDIA6Q15084 440 aa12.7□□□□□ -0.38
GGA2-210ENST00000567339 KIF6Q6ZMV9 814 aa12.7□□□□□ -0.38
GGA2-210ENST00000567339 TRMT2AQ8IZ69 625 aaKnown RBP12.7□□□□□ -0.38
GGA2-210ENST00000567339 CHPF2Q9P2E5 772 aa12.7□□□□□ -0.38
GGA2-210ENST00000567339 COL24A1Q17RW2 1714 aa12.69□□□□□ -0.38
GGA2-210ENST00000567339 ELL2O00472 640 aaPredicted RBP12.69□□□□□ -0.38
GGA2-210ENST00000567339 MYL6BP14649 208 aa12.69□□□□□ -0.38
GGA2-210ENST00000567339 EXOSC9Q06265 439 aaKnown RBP12.69□□□□□ -0.38
GGA2-210ENST00000567339 LRP10Q7Z4F1 713 aa12.69□□□□□ -0.38
GGA2-210ENST00000567339 TSPYL6Q8N831 410 aa12.69□□□□□ -0.38
GGA2-210ENST00000567339 SCN7AQ01118 1682 aa12.69□□□□□ -0.38
GGA2-210ENST00000567339 MAP3K15Q6ZN16 1313 aa12.68□□□□□ -0.38
GGA2-210ENST00000567339 VAMP4O75379 141 aa12.68□□□□□ -0.38
GGA2-210ENST00000567339 CAMTA2O94983 1202 aa12.68□□□□□ -0.38
GGA2-210ENST00000567339 PTGER2P43116 358 aa12.68□□□□□ -0.38
GGA2-210ENST00000567339 USPL1Q5W0Q7 1092 aa12.68□□□□□ -0.38
GGA2-210ENST00000567339 SGIP1Q9BQI5 828 aa12.68□□□□□ -0.38
GGA2-210ENST00000567339 PIP4K2AP48426 406 aaPredicted RBP12.67□□□□□ -0.38
GGA2-210ENST00000567339 SMIM5Q71RC9 77 aa12.67□□□□□ -0.38
GGA2-210ENST00000567339 NECTIN2Q92692 538 aa12.67□□□□□ -0.38
GGA2-210ENST00000567339 CDCA7LQ96GN5 454 aa12.67□□□□□ -0.38
GGA2-210ENST00000567339 ARXQ96QS3 562 aa12.67□□□□□ -0.38
GGA2-210ENST00000567339 SRP68Q9UHB9 627 aaKnown RBP12.67□□□□□ -0.38
GGA2-210ENST00000567339 TBC1D2BQ9UPU7 963 aa12.67□□□□□ -0.38
GGA2-210ENST00000567339 ATF5Q9Y2D1 282 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms