RNA–Protein interactions for RNA: ENST00000565248.1

THUMPD1-203, Transcript of THUMP domain containing 1, humanhuman

TSL 3

Gene THUMPD1, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-203ENST00000565248 CHL1O00533 1208 aa21.11■□□□□ 0.97
THUMPD1-203ENST00000565248 RNMTO43148 476 aaKnown RBP21.11■□□□□ 0.97
THUMPD1-203ENST00000565248 C4BP0C0L5 1744 aa21.11■□□□□ 0.97
THUMPD1-203ENST00000565248 TAF7Q15545 349 aaPredicted RBP21.1■□□□□ 0.97
THUMPD1-203ENST00000565248 DCAF5Q96JK2 942 aa21.1■□□□□ 0.97
THUMPD1-203ENST00000565248 MBIPQ9NS73 344 aa21.1■□□□□ 0.97
THUMPD1-203ENST00000565248 TSPYL4Q9UJ04 414 aa21.1■□□□□ 0.97
THUMPD1-203ENST00000565248 PHF14O94880 888 aa21.09■□□□□ 0.97
THUMPD1-203ENST00000565248 KCNA4P22459 653 aa21.09■□□□□ 0.97
THUMPD1-203ENST00000565248 EXOSC9Q06265 439 aaKnown RBP21.09■□□□□ 0.97
THUMPD1-203ENST00000565248 ITGB4P16144 1822 aa21.07■□□□□ 0.96
THUMPD1-203ENST00000565248 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.07■□□□□ 0.96
THUMPD1-203ENST00000565248 CYP27B1O15528 508 aa21.07■□□□□ 0.96
THUMPD1-203ENST00000565248 SSFA2P28290 1259 aa21.07■□□□□ 0.96
THUMPD1-203ENST00000565248 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.07■□□□□ 0.96
THUMPD1-203ENST00000565248 ZNF428Q96B54 188 aa21.07■□□□□ 0.96
THUMPD1-203ENST00000565248 LGR6Q9HBX8 967 aa21.07■□□□□ 0.96
THUMPD1-203ENST00000565248 WWC3Q9ULE0 1092 aa21.06■□□□□ 0.96
THUMPD1-203ENST00000565248 UBR3Q6ZT12 1888 aa21.06■□□□□ 0.96
THUMPD1-203ENST00000565248 APLP1P51693 650 aa21.05■□□□□ 0.96
THUMPD1-203ENST00000565248 KIF3CO14782 793 aa21.04■□□□□ 0.96
THUMPD1-203ENST00000565248 ADAMTS7Q9UKP4 1686 aa21.04■□□□□ 0.96
THUMPD1-203ENST00000565248 RNF123Q5XPI4 1314 aa21.04■□□□□ 0.96
THUMPD1-203ENST00000565248 NKX1-1Q15270 411 aaPredicted RBP21.03■□□□□ 0.96
THUMPD1-203ENST00000565248 KDM6AO15550 1401 aaPredicted RBP21.03■□□□□ 0.96
THUMPD1-203ENST00000565248 BTBD11A6QL63 1104 aa21.02■□□□□ 0.96
THUMPD1-203ENST00000565248 RRP1P56182 461 aaKnown RBP21.02■□□□□ 0.96
THUMPD1-203ENST00000565248 PIGBQ92521 554 aa21.02■□□□□ 0.96
THUMPD1-203ENST00000565248 SLC52A2Q9HAB3 445 aa21.02■□□□□ 0.96
THUMPD1-203ENST00000565248 SOS1Q07889 1333 aaPredicted RBP21.02■□□□□ 0.95
THUMPD1-203ENST00000565248 TOGARAM1Q9Y4F4 1720 aa21.01■□□□□ 0.95
THUMPD1-203ENST00000565248 LOC102724428A0A0B4J2F2 783 aa21.01■□□□□ 0.95
THUMPD1-203ENST00000565248 RARSP54136 660 aaKnown RBP21.01■□□□□ 0.95
THUMPD1-203ENST00000565248 SIK1P57059 783 aa21.01■□□□□ 0.95
THUMPD1-203ENST00000565248 CABP4P57796 275 aa21.01■□□□□ 0.95
THUMPD1-203ENST00000565248 TWISTNBQ3B726 338 aaPredicted RBP21.01■□□□□ 0.95
THUMPD1-203ENST00000565248 AMIGO3Q86WK7 504 aa21.01■□□□□ 0.95
THUMPD1-203ENST00000565248 MIS18AQ9NYP9 233 aa21.01■□□□□ 0.95
THUMPD1-203ENST00000565248 ERVV-2B6SEH9 535 aa21■□□□□ 0.95
THUMPD1-203ENST00000565248 CHMP4AQ9BY43 222 aa21■□□□□ 0.95
THUMPD1-203ENST00000565248 GTF3C3Q9Y5Q9 886 aa21■□□□□ 0.95
THUMPD1-203ENST00000565248 SCN11AQ9UI33 1791 aa21■□□□□ 0.95
THUMPD1-203ENST00000565248 GNPATO15228 680 aa20.99■□□□□ 0.95
THUMPD1-203ENST00000565248 TOMM70O94826 608 aa20.99■□□□□ 0.95
THUMPD1-203ENST00000565248 ALDH1L2Q3SY69 923 aa20.99■□□□□ 0.95
THUMPD1-203ENST00000565248 SMIM5Q71RC9 77 aa20.99■□□□□ 0.95
THUMPD1-203ENST00000565248 TMOD3Q9NYL9 352 aa20.99■□□□□ 0.95
THUMPD1-203ENST00000565248 MRC1P22897 1456 aa20.99■□□□□ 0.95
THUMPD1-203ENST00000565248 CICQ96RK0 1608 aaPredicted RBP20.98■□□□□ 0.95
THUMPD1-203ENST00000565248 CANXP27824 592 aaKnown RBP20.98■□□□□ 0.95
THUMPD1-203ENST00000565248 C8orf58Q8NAV2 365 aa20.98■□□□□ 0.95
THUMPD1-203ENST00000565248 LINC00116Q8NCU8 138 aa20.98■□□□□ 0.95
THUMPD1-203ENST00000565248 SMC4Q9NTJ3 1288 aa20.98■□□□□ 0.95
THUMPD1-203ENST00000565248 VAMP4O75379 141 aa20.97■□□□□ 0.95
THUMPD1-203ENST00000565248 ATP6V1AP38606 617 aa20.97■□□□□ 0.95
THUMPD1-203ENST00000565248 TGFB2P61812 414 aa20.97■□□□□ 0.95
THUMPD1-203ENST00000565248 ELL2O00472 640 aaPredicted RBP20.96■□□□□ 0.95
THUMPD1-203ENST00000565248 MMP10P09238 476 aa20.96■□□□□ 0.95
THUMPD1-203ENST00000565248 VIRMAQ69YN4 1812 aaKnown RBP20.96■□□□□ 0.95
THUMPD1-203ENST00000565248 FKBP8Q14318 412 aa20.95■□□□□ 0.94
THUMPD1-203ENST00000565248 TTC5Q8N0Z6 440 aa20.95■□□□□ 0.94
THUMPD1-203ENST00000565248 TSPYL6Q8N831 410 aa20.95■□□□□ 0.94
THUMPD1-203ENST00000565248 NFATC2IPQ8NCF5 419 aa20.95■□□□□ 0.94
THUMPD1-203ENST00000565248 BCS1LQ9Y276 419 aa20.95■□□□□ 0.94
THUMPD1-203ENST00000565248 BCAR3O75815 825 aa20.94■□□□□ 0.94
THUMPD1-203ENST00000565248 ARHGAP27Q6ZUM4 889 aa20.94■□□□□ 0.94
THUMPD1-203ENST00000565248 NLGN1Q8N2Q7 840 aa20.94■□□□□ 0.94
THUMPD1-203ENST00000565248 KIF16BQ96L93 1317 aa20.94■□□□□ 0.94
THUMPD1-203ENST00000565248 KDM3BQ7LBC6 1761 aa20.94■□□□□ 0.94
THUMPD1-203ENST00000565248 KIF13BQ9NQT8 1826 aa20.94■□□□□ 0.94
THUMPD1-203ENST00000565248 SIPA1L3O60292 1781 aaPredicted RBP20.93■□□□□ 0.94
THUMPD1-203ENST00000565248 HOXB7P09629 217 aa20.93■□□□□ 0.94
THUMPD1-203ENST00000565248 EIF4A1P60842 406 aaKnown RBP20.93■□□□□ 0.94
THUMPD1-203ENST00000565248 TRAPPC3LQ5T215 181 aa20.93■□□□□ 0.94
THUMPD1-203ENST00000565248 ERICH6BQ5W0A0 696 aa20.93■□□□□ 0.94
THUMPD1-203ENST00000565248 SSH1Q8WYL5 1049 aa20.93■□□□□ 0.94
THUMPD1-203ENST00000565248 ASAP1Q9ULH1 1129 aa20.93■□□□□ 0.94
THUMPD1-203ENST00000565248 N4BP2Q86UW6 1770 aaPredicted RBP20.92■□□□□ 0.94
THUMPD1-203ENST00000565248 IPO8O15397 1037 aaKnown RBP20.92■□□□□ 0.94
THUMPD1-203ENST00000565248 MS4A1P11836 297 aa20.92■□□□□ 0.94
THUMPD1-203ENST00000565248 ZNF790Q6PG37 636 aa20.92■□□□□ 0.94
THUMPD1-203ENST00000565248 C16orf71Q8IYS4 520 aaPredicted RBP20.92■□□□□ 0.94
THUMPD1-203ENST00000565248 DNAJC5GQ8N7S2 189 aa20.92■□□□□ 0.94
THUMPD1-203ENST00000565248 CCDC87Q9NVE4 849 aa20.92■□□□□ 0.94
THUMPD1-203ENST00000565248 RTCBQ9Y3I0 505 aaKnown RBP20.92■□□□□ 0.94
THUMPD1-203ENST00000565248 PXDNLA1KZ92 1463 aa20.92■□□□□ 0.94
THUMPD1-203ENST00000565248 A0A0G2JLW4 131 aa20.91■□□□□ 0.94
THUMPD1-203ENST00000565248 MAPK8IP2Q13387 824 aaPredicted RBP20.91■□□□□ 0.94
THUMPD1-203ENST00000565248 ITPK1Q13572 414 aa20.91■□□□□ 0.94
THUMPD1-203ENST00000565248 KRT24Q2M2I5 525 aa20.91■□□□□ 0.94
THUMPD1-203ENST00000565248 FRAT1Q92837 279 aaPredicted RBP20.91■□□□□ 0.94
THUMPD1-203ENST00000565248 BCL2L13Q9BXK5 485 aa20.91■□□□□ 0.94
THUMPD1-203ENST00000565248 BRPF1P55201 1214 aaPredicted RBP20.9■□□□□ 0.94
THUMPD1-203ENST00000565248 CCDC30Q5VVM6 783 aa20.9■□□□□ 0.94
THUMPD1-203ENST00000565248 STK31Q9BXU1 1019 aa20.9■□□□□ 0.94
THUMPD1-203ENST00000565248 IRX6P78412 446 aaPredicted RBP20.89■□□□□ 0.93
THUMPD1-203ENST00000565248 ZKSCAN2Q63HK3 967 aa20.89■□□□□ 0.93
THUMPD1-203ENST00000565248 PLIN1O60240 522 aa20.88■□□□□ 0.93
THUMPD1-203ENST00000565248 RBM46Q8TBY0 533 aaKnown RBP20.88■□□□□ 0.93
THUMPD1-203ENST00000565248 FMNL2Q96PY5 1086 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms