RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 DDX10Q13206 875 aaKnown RBP19.63■□□□□ 0.73
SNX29-203ENST00000564111 NLGN2Q8NFZ4 835 aa19.63■□□□□ 0.73
SNX29-203ENST00000564111 KDM3BQ7LBC6 1761 aa19.63■□□□□ 0.73
SNX29-203ENST00000564111 KIAA1551Q9HCM1 1747 aa19.62■□□□□ 0.73
SNX29-203ENST00000564111 TGFB2P61812 414 aa19.61■□□□□ 0.73
SNX29-203ENST00000564111 NFE2L2Q16236 605 aa19.61■□□□□ 0.73
SNX29-203ENST00000564111 LMOD3Q0VAK6 560 aa19.6■□□□□ 0.73
SNX29-203ENST00000564111 NPM2Q86SE8 214 aaKnown RBP19.6■□□□□ 0.73
SNX29-203ENST00000564111 NARFQ9UHQ1 456 aa19.6■□□□□ 0.73
SNX29-203ENST00000564111 SRCAPQ6ZRS2 3230 aa19.6■□□□□ 0.73
SNX29-203ENST00000564111 PELP1Q8IZL8 1130 aaKnown RBP19.6■□□□□ 0.73
SNX29-203ENST00000564111 NRXN2Q9P2S2 1712 aa19.59■□□□□ 0.73
SNX29-203ENST00000564111 BCORQ6W2J9 1755 aa19.59■□□□□ 0.73
SNX29-203ENST00000564111 ZNF496Q96IT1 587 aaPredicted RBP19.59■□□□□ 0.73
SNX29-203ENST00000564111 SMIM5Q71RC9 77 aa19.58■□□□□ 0.73
SNX29-203ENST00000564111 PLEKHF1Q96S99 279 aa19.58■□□□□ 0.73
SNX29-203ENST00000564111 IL6STP40189 918 aaPredicted RBP19.57■□□□□ 0.72
SNX29-203ENST00000564111 TAF7Q15545 349 aaPredicted RBP19.57■□□□□ 0.72
SNX29-203ENST00000564111 ZBTB1Q9Y2K1 713 aa19.57■□□□□ 0.72
SNX29-203ENST00000564111 PXDNLA1KZ92 1463 aa19.57■□□□□ 0.72
SNX29-203ENST00000564111 BRCA1P38398 1863 aaKnown RBP19.57■□□□□ 0.72
SNX29-203ENST00000564111 RGL2O15211 777 aa19.56■□□□□ 0.72
SNX29-203ENST00000564111 SNRPA1P09661 255 aaKnown RBP19.56■□□□□ 0.72
SNX29-203ENST00000564111 ARFGEF1Q9Y6D6 1849 aa19.56■□□□□ 0.72
SNX29-203ENST00000564111 EIF5P55010 431 aaKnown RBP19.55■□□□□ 0.72
SNX29-203ENST00000564111 WDR43Q15061 677 aaKnown RBP eCLIP19.55■□□□□ 0.72
SNX29-203ENST00000564111 MCM10Q7L590 875 aa19.55■□□□□ 0.72
SNX29-203ENST00000564111 BABAM1Q9NWV8 329 aa19.55■□□□□ 0.72
SNX29-203ENST00000564111 N4BP2Q86UW6 1770 aaPredicted RBP19.55■□□□□ 0.72
SNX29-203ENST00000564111 AFDNP55196 1824 aaKnown RBP19.55■□□□□ 0.72
SNX29-203ENST00000564111 SRP68Q9UHB9 627 aaKnown RBP19.55■□□□□ 0.72
SNX29-203ENST00000564111 DLEC1Q9Y238 1755 aa19.54■□□□□ 0.72
SNX29-203ENST00000564111 CANXP27824 592 aaKnown RBP19.53■□□□□ 0.72
SNX29-203ENST00000564111 USPL1Q5W0Q7 1092 aa19.53■□□□□ 0.72
SNX29-203ENST00000564111 PDZRN3Q9UPQ7 1066 aa19.53■□□□□ 0.72
SNX29-203ENST00000564111 TM4SF1P30408 202 aa19.53■□□□□ 0.72
SNX29-203ENST00000564111 FKBP8Q14318 412 aa19.53■□□□□ 0.72
SNX29-203ENST00000564111 YBX3P16989 372 aaKnown RBP eCLIP19.52■□□□□ 0.71
SNX29-203ENST00000564111 POLRMTO00411 1230 aaKnown RBP19.51■□□□□ 0.71
SNX29-203ENST00000564111 ZNF784Q8NCA9 323 aaPredicted RBP19.51■□□□□ 0.71
SNX29-203ENST00000564111 PRKRIP1Q9H875 184 aaPredicted RBP19.51■□□□□ 0.71
SNX29-203ENST00000564111 ZNF652Q9Y2D9 606 aa19.5■□□□□ 0.71
SNX29-203ENST00000564111 DDR1Q08345 913 aa19.49■□□□□ 0.71
SNX29-203ENST00000564111 CARMIL3Q8ND23 1372 aa19.49■□□□□ 0.71
SNX29-203ENST00000564111 RUNDC1Q96C34 613 aa19.49■□□□□ 0.71
SNX29-203ENST00000564111 ERBB4Q15303 1308 aa19.49■□□□□ 0.71
SNX29-203ENST00000564111 DCTN1Q14203 1278 aa19.48■□□□□ 0.71
SNX29-203ENST00000564111 NFIXQ14938 502 aa19.48■□□□□ 0.71
SNX29-203ENST00000564111 KCNQ3O43525 872 aa19.47■□□□□ 0.71
SNX29-203ENST00000564111 PIM2Q9P1W9 311 aa19.47■□□□□ 0.71
SNX29-203ENST00000564111 TMPOP42166 694 aaKnown RBP19.46■□□□□ 0.71
SNX29-203ENST00000564111 RIPK4P57078 832 aa19.46■□□□□ 0.71
SNX29-203ENST00000564111 CLEC4GQ6UXB4 293 aa19.46■□□□□ 0.71
SNX29-203ENST00000564111 SERPINB2P05120 415 aa19.45■□□□□ 0.7
SNX29-203ENST00000564111 DPEP1P16444 411 aa19.45■□□□□ 0.7
SNX29-203ENST00000564111 DZIP3Q86Y13 1208 aaKnown RBP19.45■□□□□ 0.7
SNX29-203ENST00000564111 BCL2L12Q9HB09 334 aa19.45■□□□□ 0.7
SNX29-203ENST00000564111 A1BGP04217 495 aa19.44■□□□□ 0.7
SNX29-203ENST00000564111 ZNF330Q9Y3S2 320 aaPredicted RBP19.44■□□□□ 0.7
SNX29-203ENST00000564111 CAMTA2O94983 1202 aa19.43■□□□□ 0.7
SNX29-203ENST00000564111 DALRD3Q5D0E6 543 aaKnown RBP19.43■□□□□ 0.7
SNX29-203ENST00000564111 TSPYL4Q9UJ04 414 aa19.43■□□□□ 0.7
SNX29-203ENST00000564111 USP16Q9Y5T5 823 aa19.43■□□□□ 0.7
SNX29-203ENST00000564111 ARFGEF2Q9Y6D5 1785 aa19.43■□□□□ 0.7
SNX29-203ENST00000564111 ADCY9O60503 1353 aa19.43■□□□□ 0.7
SNX29-203ENST00000564111 A0A0G2JLW4 131 aa19.43■□□□□ 0.7
SNX29-203ENST00000564111 EIF4A1P60842 406 aaKnown RBP19.43■□□□□ 0.7
SNX29-203ENST00000564111 BCS1LQ9Y276 419 aa19.43■□□□□ 0.7
SNX29-203ENST00000564111 CALD1Q05682 793 aaKnown RBP19.42■□□□□ 0.7
SNX29-203ENST00000564111 SETDB2Q96T68 719 aa19.42■□□□□ 0.7
SNX29-203ENST00000564111 GIGYF1O75420 1035 aaPredicted RBP19.41■□□□□ 0.7
SNX29-203ENST00000564111 PDE6BP35913 854 aa19.41■□□□□ 0.7
SNX29-203ENST00000564111 ST5P78524 1137 aa19.41■□□□□ 0.7
SNX29-203ENST00000564111 ANKRD31Q8N7Z5 1873 aa19.41■□□□□ 0.7
SNX29-203ENST00000564111 ATP10DQ9P241 1426 aa19.41■□□□□ 0.7
SNX29-203ENST00000564111 ZNF316A6NFI3 1004 aaPredicted RBP19.41■□□□□ 0.7
SNX29-203ENST00000564111 TBC1D2BQ9UPU7 963 aa19.41■□□□□ 0.7
SNX29-203ENST00000564111 BRIP1Q9BX63 1249 aa19.4■□□□□ 0.7
SNX29-203ENST00000564111 H0YIN7 160 aa19.39■□□□□ 0.69
SNX29-203ENST00000564111 TBC1D9BQ66K14 1250 aa19.39■□□□□ 0.69
SNX29-203ENST00000564111 KIF6Q6ZMV9 814 aa19.39■□□□□ 0.69
SNX29-203ENST00000564111 CNBD1Q8NA66 436 aa19.39■□□□□ 0.69
SNX29-203ENST00000564111 IBTKQ9P2D0 1353 aaPredicted RBP19.38■□□□□ 0.69
SNX29-203ENST00000564111 ERVV-1B6SEH8 477 aa19.38■□□□□ 0.69
SNX29-203ENST00000564111 NPHP1O15259 732 aa19.38■□□□□ 0.69
SNX29-203ENST00000564111 KCNA3P22001 575 aa19.38■□□□□ 0.69
SNX29-203ENST00000564111 C1QTNF8P60827 252 aa19.38■□□□□ 0.69
SNX29-203ENST00000564111 NUP98P52948 1817 aa19.38■□□□□ 0.69
SNX29-203ENST00000564111 BICDL1Q6ZP65 573 aa19.37■□□□□ 0.69
SNX29-203ENST00000564111 C2CD5Q86YS7 1000 aa19.37■□□□□ 0.69
SNX29-203ENST00000564111 THUMPD2Q9BTF0 503 aaKnown RBP19.37■□□□□ 0.69
SNX29-203ENST00000564111 ADAMTS8Q9UP79 889 aa19.37■□□□□ 0.69
SNX29-203ENST00000564111 HOXB7P09629 217 aa19.36■□□□□ 0.69
SNX29-203ENST00000564111 MIS18AQ9NYP9 233 aa19.36■□□□□ 0.69
SNX29-203ENST00000564111 COL11A2P13942 1736 aaPredicted RBP19.36■□□□□ 0.69
SNX29-203ENST00000564111 NBPF26B4DH59 902 aa19.36■□□□□ 0.69
SNX29-203ENST00000564111 NBPF10Q6P3W6 841 aaKnown RBP19.36■□□□□ 0.69
SNX29-203ENST00000564111 CCDC146Q8IYE0 955 aa19.36■□□□□ 0.69
SNX29-203ENST00000564111 NBPF15Q8N660 670 aa19.36■□□□□ 0.69
SNX29-203ENST00000564111 CHMP4AQ9BY43 222 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms