RNA–Protein interactions for RNA: ENST00000562659.1

GSE1-212, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 2

Gene GSE1, Length 756 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-212ENST00000562659 LRRC4BQ9NT99 713 aa16.87■□□□□ 0.29
GSE1-212ENST00000562659 ITPK1Q13572 414 aa16.86■□□□□ 0.29
GSE1-212ENST00000562659 CDCA7LQ96GN5 454 aa16.86■□□□□ 0.29
GSE1-212ENST00000562659 CYP19A1P11511 503 aaPredicted RBP16.85■□□□□ 0.29
GSE1-212ENST00000562659 ZNF428Q96B54 188 aa16.85■□□□□ 0.29
GSE1-212ENST00000562659 CNTNAP4Q9C0A0 1308 aa16.85■□□□□ 0.29
GSE1-212ENST00000562659 CICQ96RK0 1608 aaPredicted RBP16.85■□□□□ 0.29
GSE1-212ENST00000562659 KDM3BQ7LBC6 1761 aa16.84■□□□□ 0.29
GSE1-212ENST00000562659 UBR2Q8IWV8 1755 aa16.84■□□□□ 0.29
GSE1-212ENST00000562659 SAMD1Q6SPF0 538 aaPredicted RBP16.84■□□□□ 0.29
GSE1-212ENST00000562659 DNAJC10Q8IXB1 793 aa16.84■□□□□ 0.29
GSE1-212ENST00000562659 C8orf58Q8NAV2 365 aa16.84■□□□□ 0.29
GSE1-212ENST00000562659 ERBB4Q15303 1308 aa16.84■□□□□ 0.29
GSE1-212ENST00000562659 LY75O60449 1722 aa16.83■□□□□ 0.28
GSE1-212ENST00000562659 EXOSC9Q06265 439 aaKnown RBP16.83■□□□□ 0.28
GSE1-212ENST00000562659 LINC00116Q8NCU8 138 aa16.83■□□□□ 0.28
GSE1-212ENST00000562659 TWISTNBQ3B726 338 aaPredicted RBP16.82■□□□□ 0.28
GSE1-212ENST00000562659 USP16Q9Y5T5 823 aa16.82■□□□□ 0.28
GSE1-212ENST00000562659 VIRMAQ69YN4 1812 aaKnown RBP16.82■□□□□ 0.28
GSE1-212ENST00000562659 VAMP4O75379 141 aa16.81■□□□□ 0.28
GSE1-212ENST00000562659 CRKLP46109 303 aaKnown RBP16.81■□□□□ 0.28
GSE1-212ENST00000562659 KRT24Q2M2I5 525 aa16.81■□□□□ 0.28
GSE1-212ENST00000562659 TSPYL6Q8N831 410 aa16.81■□□□□ 0.28
GSE1-212ENST00000562659 AKT1S1Q96B36 256 aa16.81■□□□□ 0.28
GSE1-212ENST00000562659 CCDC87Q9NVE4 849 aa16.81■□□□□ 0.28
GSE1-212ENST00000562659 NBPF14Q5TI25 921 aa16.8■□□□□ 0.28
GSE1-212ENST00000562659 INTS5Q6P9B9 1019 aaKnown RBP16.8■□□□□ 0.28
GSE1-212ENST00000562659 KAT6BQ8WYB5 2073 aa16.8■□□□□ 0.28
GSE1-212ENST00000562659 PRAMEF22A3QJZ6 481 aa16.79■□□□□ 0.28
GSE1-212ENST00000562659 RPS6KA4O75676 772 aa16.79■□□□□ 0.28
GSE1-212ENST00000562659 KCNQ4P56696 695 aa16.79■□□□□ 0.28
GSE1-212ENST00000562659 HDGFL1Q5TGJ6 251 aa16.79■□□□□ 0.28
GSE1-212ENST00000562659 CCDC30Q5VVM6 783 aa16.79■□□□□ 0.28
GSE1-212ENST00000562659 YTHDC1Q96MU7 727 aaKnown RBP16.79■□□□□ 0.28
GSE1-212ENST00000562659 C5P01031 1676 aa16.78■□□□□ 0.28
GSE1-212ENST00000562659 IL6STP40189 918 aaPredicted RBP16.78■□□□□ 0.28
GSE1-212ENST00000562659 FLAD1Q8NFF5 587 aa16.78■□□□□ 0.28
GSE1-212ENST00000562659 DBF4Q9UBU7 674 aaPredicted RBP16.78■□□□□ 0.28
GSE1-212ENST00000562659 ELL2O00472 640 aaPredicted RBP16.77■□□□□ 0.28
GSE1-212ENST00000562659 SSFA2P28290 1259 aa16.77■□□□□ 0.28
GSE1-212ENST00000562659 SLC15A2Q16348 729 aa16.77■□□□□ 0.28
GSE1-212ENST00000562659 AK7Q96M32 723 aa16.77■□□□□ 0.28
GSE1-212ENST00000562659 DDX21Q9NR30 783 aaKnown RBP eCLIP16.77■□□□□ 0.28
GSE1-212ENST00000562659 STK32BQ9NY57 414 aa16.77■□□□□ 0.28
GSE1-212ENST00000562659 A1BGP04217 495 aa16.76■□□□□ 0.27
GSE1-212ENST00000562659 EIF2S2P20042 333 aaKnown RBP16.76■□□□□ 0.27
GSE1-212ENST00000562659 EIF5P55010 431 aaKnown RBP16.76■□□□□ 0.27
GSE1-212ENST00000562659 PDIA6Q15084 440 aa16.76■□□□□ 0.27
GSE1-212ENST00000562659 ALDH1L2Q3SY69 923 aa16.76■□□□□ 0.27
GSE1-212ENST00000562659 RTCBQ9Y3I0 505 aaKnown RBP16.76■□□□□ 0.27
GSE1-212ENST00000562659 RREB1Q92766 1687 aa16.75■□□□□ 0.27
GSE1-212ENST00000562659 RGL2O15211 777 aa16.75■□□□□ 0.27
GSE1-212ENST00000562659 ZNF827Q17R98 1081 aa16.75■□□□□ 0.27
GSE1-212ENST00000562659 STK31Q9BXU1 1019 aa16.75■□□□□ 0.27
GSE1-212ENST00000562659 HYPKQ9NX55 129 aa16.75■□□□□ 0.27
GSE1-212ENST00000562659 ZBTB1Q9Y2K1 713 aa16.75■□□□□ 0.27
GSE1-212ENST00000562659 TJP1Q07157 1748 aa16.75■□□□□ 0.27
GSE1-212ENST00000562659 A0A087WZG4 1122 aa16.74■□□□□ 0.27
GSE1-212ENST00000562659 NBPF26B4DH59 902 aa16.74■□□□□ 0.27
GSE1-212ENST00000562659 GNPATO15228 680 aa16.74■□□□□ 0.27
GSE1-212ENST00000562659 BRPF1P55201 1214 aaPredicted RBP16.74■□□□□ 0.27
GSE1-212ENST00000562659 NBPF10Q6P3W6 841 aaKnown RBP16.74■□□□□ 0.27
GSE1-212ENST00000562659 LRP10Q7Z4F1 713 aa16.74■□□□□ 0.27
GSE1-212ENST00000562659 NBPF15Q8N660 670 aa16.74■□□□□ 0.27
GSE1-212ENST00000562659 ANO8Q9HCE9 1232 aaPredicted RBP16.74■□□□□ 0.27
GSE1-212ENST00000562659 TFCP2L1Q9NZI6 479 aa16.74■□□□□ 0.27
GSE1-212ENST00000562659 TRAPPC3LQ5T215 181 aa16.73■□□□□ 0.27
GSE1-212ENST00000562659 C4BP0C0L5 1744 aa16.73■□□□□ 0.27
GSE1-212ENST00000562659 CANXP27824 592 aaKnown RBP16.72■□□□□ 0.27
GSE1-212ENST00000562659 NPM2Q86SE8 214 aaKnown RBP16.72■□□□□ 0.27
GSE1-212ENST00000562659 CHPF2Q9P2E5 772 aa16.72■□□□□ 0.27
GSE1-212ENST00000562659 COL5A3P25940 1745 aaPredicted RBP16.71■□□□□ 0.27
GSE1-212ENST00000562659 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.71■□□□□ 0.27
GSE1-212ENST00000562659 RARSP54136 660 aaKnown RBP16.71■□□□□ 0.27
GSE1-212ENST00000562659 ARHGEF1Q92888 912 aaKnown RBP16.7■□□□□ 0.26
GSE1-212ENST00000562659 NUP188Q5SRE5 1749 aa16.7■□□□□ 0.26
GSE1-212ENST00000562659 LAMB4A4D0S4 1761 aa16.69■□□□□ 0.26
GSE1-212ENST00000562659 COL15A1P39059 1388 aa16.69■□□□□ 0.26
GSE1-212ENST00000562659 ERVV-1B6SEH8 477 aa16.69■□□□□ 0.26
GSE1-212ENST00000562659 PROSER3Q2NL68 480 aa16.69■□□□□ 0.26
GSE1-212ENST00000562659 SLC16A10Q8TF71 515 aa16.69■□□□□ 0.26
GSE1-212ENST00000562659 SSH1Q8WYL5 1049 aa16.69■□□□□ 0.26
GSE1-212ENST00000562659 NECTIN2Q92692 538 aa16.69■□□□□ 0.26
GSE1-212ENST00000562659 PNPLA7Q6ZV29 1317 aa16.69■□□□□ 0.26
GSE1-212ENST00000562659 TAF1LQ8IZX4 1826 aa16.68■□□□□ 0.26
GSE1-212ENST00000562659 MYL6BP14649 208 aa16.68■□□□□ 0.26
GSE1-212ENST00000562659 RFC4P35249 363 aa16.68■□□□□ 0.26
GSE1-212ENST00000562659 AMIGO3Q86WK7 504 aa16.68■□□□□ 0.26
GSE1-212ENST00000562659 NARFQ9UHQ1 456 aa16.68■□□□□ 0.26
GSE1-212ENST00000562659 CLEC4GQ6UXB4 293 aa16.67■□□□□ 0.26
GSE1-212ENST00000562659 COPS6Q7L5N1 327 aa16.67■□□□□ 0.26
GSE1-212ENST00000562659 COL23A1Q86Y22 540 aaPredicted RBP16.67■□□□□ 0.26
GSE1-212ENST00000562659 MRPL50Q8N5N7 158 aaKnown RBP16.67■□□□□ 0.26
GSE1-212ENST00000562659 DDX58O95786 925 aaKnown RBP16.66■□□□□ 0.26
GSE1-212ENST00000562659 DZIP3Q86Y13 1208 aaKnown RBP16.66■□□□□ 0.26
GSE1-212ENST00000562659 XAGE3Q8WTP9 111 aa16.66■□□□□ 0.26
GSE1-212ENST00000562659 PTPRCP08575 1304 aa16.66■□□□□ 0.26
GSE1-212ENST00000562659 USP42Q9H9J4 1324 aaKnown RBP16.66■□□□□ 0.26
GSE1-212ENST00000562659 ZPR1O75312 459 aa16.65■□□□□ 0.26
GSE1-212ENST00000562659 CAMTA2O94983 1202 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms