RNA–Protein interactions for RNA: ENST00000562409.1

AC009090.1-201, humanhuman

TSL 3 BASIC

Gene AC009090.1, Length 358 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009090.1-201ENST00000562409 RGS12O14924 1447 aa11.46□□□□□ -0.57
AC009090.1-201ENST00000562409 TNS3Q68CZ2 1445 aa11.46□□□□□ -0.57
AC009090.1-201ENST00000562409 ARHGEF10O15013 1369 aa11.46□□□□□ -0.57
AC009090.1-201ENST00000562409 FDX1P10109 184 aa11.46□□□□□ -0.57
AC009090.1-201ENST00000562409 RIC3Q7Z5B4 369 aa11.46□□□□□ -0.57
AC009090.1-201ENST00000562409 ZNF516Q92618 1163 aa11.46□□□□□ -0.57
AC009090.1-201ENST00000562409 NUDT16Q96DE0 195 aaKnown RBP11.46□□□□□ -0.57
AC009090.1-201ENST00000562409 CDK19Q9BWU1 502 aa11.46□□□□□ -0.57
AC009090.1-201ENST00000562409 CCDC9Q9Y3X0 531 aaKnown RBP11.46□□□□□ -0.57
AC009090.1-201ENST00000562409 BCL9LQ86UU0 1499 aa11.45□□□□□ -0.58
AC009090.1-201ENST00000562409 ATRNO75882 1429 aa11.45□□□□□ -0.58
AC009090.1-201ENST00000562409 PRR36Q9H6K5 1346 aa11.45□□□□□ -0.58
AC009090.1-201ENST00000562409 ZPR1O75312 459 aa11.45□□□□□ -0.58
AC009090.1-201ENST00000562409 KCNC4Q03721 635 aa11.45□□□□□ -0.58
AC009090.1-201ENST00000562409 NEUROD1Q13562 356 aa11.45□□□□□ -0.58
AC009090.1-201ENST00000562409 NBPF1Q3BBV0 1214 aa11.45□□□□□ -0.58
AC009090.1-201ENST00000562409 RGPD8O14715 1765 aaPredicted RBP11.44□□□□□ -0.58
AC009090.1-201ENST00000562409 ATAD2Q6PL18 1390 aa11.44□□□□□ -0.58
AC009090.1-201ENST00000562409 CLK2P49760 499 aaKnown RBP11.44□□□□□ -0.58
AC009090.1-201ENST00000562409 CSPP1Q1MSJ5 1256 aa11.44□□□□□ -0.58
AC009090.1-201ENST00000562409 RSBN1LQ6PCB5 846 aaPredicted RBP11.44□□□□□ -0.58
AC009090.1-201ENST00000562409 FAM83GA6ND36 823 aa11.43□□□□□ -0.58
AC009090.1-201ENST00000562409 SH3D19Q5HYK7 790 aa11.43□□□□□ -0.58
AC009090.1-201ENST00000562409 L3MBTL2Q969R5 705 aa11.43□□□□□ -0.58
AC009090.1-201ENST00000562409 SIN3AQ96ST3 1273 aa11.43□□□□□ -0.58
AC009090.1-201ENST00000562409 LIMD1Q9UGP4 676 aa11.43□□□□□ -0.58
AC009090.1-201ENST00000562409 TLL1O43897 1013 aa11.42□□□□□ -0.58
AC009090.1-201ENST00000562409 SKIV2LQ15477 1246 aaKnown RBP11.42□□□□□ -0.58
AC009090.1-201ENST00000562409 Q3C1V9 767 aa11.42□□□□□ -0.58
AC009090.1-201ENST00000562409 ADGRB2O60241 1585 aa11.41□□□□□ -0.58
AC009090.1-201ENST00000562409 TULP4Q9NRJ4 1543 aa11.41□□□□□ -0.58
AC009090.1-201ENST00000562409 SPTLC1O15269 473 aa11.41□□□□□ -0.58
AC009090.1-201ENST00000562409 SRPK2P78362 688 aaKnown RBP11.41□□□□□ -0.58
AC009090.1-201ENST00000562409 VPS72Q15906 364 aa11.41□□□□□ -0.58
AC009090.1-201ENST00000562409 PCDHGC3Q9UN70 934 aa11.41□□□□□ -0.58
AC009090.1-201ENST00000562409 SLIT2O94813 1529 aa11.4□□□□□ -0.58
AC009090.1-201ENST00000562409 USP32Q8NFA0 1604 aa11.4□□□□□ -0.58
AC009090.1-201ENST00000562409 C6orf229H3BNL8 230 aa11.4□□□□□ -0.58
AC009090.1-201ENST00000562409 FMNL1O95466 1100 aaPredicted RBP11.4□□□□□ -0.58
AC009090.1-201ENST00000562409 NBPF8Q3BBV2 869 aa11.4□□□□□ -0.58
AC009090.1-201ENST00000562409 RNF19BQ6ZMZ0 732 aa11.4□□□□□ -0.58
AC009090.1-201ENST00000562409 CCDC125Q86Z20 511 aa11.4□□□□□ -0.58
AC009090.1-201ENST00000562409 SEPT12Q8IYM1 358 aa11.4□□□□□ -0.58
AC009090.1-201ENST00000562409 BTG4Q9NY30 223 aa11.4□□□□□ -0.58
AC009090.1-201ENST00000562409 PCDHB15Q9Y5E8 787 aa11.4□□□□□ -0.58
AC009090.1-201ENST00000562409 ACEP12821 1306 aa11.39□□□□□ -0.59
AC009090.1-201ENST00000562409 CENPJQ9HC77 1338 aaPredicted RBP11.39□□□□□ -0.59
AC009090.1-201ENST00000562409 MYT1Q01538 1121 aa11.39□□□□□ -0.59
AC009090.1-201ENST00000562409 NKX2-3Q8TAU0 364 aa11.39□□□□□ -0.59
AC009090.1-201ENST00000562409 SYMPKQ92797 1274 aaKnown RBP11.39□□□□□ -0.59
AC009090.1-201ENST00000562409 PCMTD1Q96MG8 357 aaPredicted RBP11.39□□□□□ -0.59
AC009090.1-201ENST00000562409 SPSB2Q99619 263 aa11.39□□□□□ -0.59
AC009090.1-201ENST00000562409 MARF1Q9Y4F3 1742 aaKnown RBP11.39□□□□□ -0.59
AC009090.1-201ENST00000562409 RALGAPBQ86X10 1494 aa11.38□□□□□ -0.59
AC009090.1-201ENST00000562409 GJA5P36382 358 aa11.38□□□□□ -0.59
AC009090.1-201ENST00000562409 NUTM2GQ5VZR2 741 aa11.38□□□□□ -0.59
AC009090.1-201ENST00000562409 PROCA1Q8NCQ7 364 aaPredicted RBP11.38□□□□□ -0.59
AC009090.1-201ENST00000562409 PRDM11Q9NQV5 511 aa11.38□□□□□ -0.59
AC009090.1-201ENST00000562409 BRICD5Q6PL45 260 aa11.37□□□□□ -0.59
AC009090.1-201ENST00000562409 TRAF7Q6Q0C0 670 aa11.37□□□□□ -0.59
AC009090.1-201ENST00000562409 ABTB2Q8N961 1025 aa11.37□□□□□ -0.59
AC009090.1-201ENST00000562409 ARHGEF28Q8N1W1 1705 aaKnown RBP11.36□□□□□ -0.59
AC009090.1-201ENST00000562409 KIAA1210Q9ULL0 1709 aa11.36□□□□□ -0.59
AC009090.1-201ENST00000562409 GFRA3O60609 400 aa11.36□□□□□ -0.59
AC009090.1-201ENST00000562409 ADH1BP00325 375 aa11.36□□□□□ -0.59
AC009090.1-201ENST00000562409 ZC3H6P61129 1189 aaKnown RBP11.36□□□□□ -0.59
AC009090.1-201ENST00000562409 SF3B2Q13435 895 aaKnown RBP11.36□□□□□ -0.59
AC009090.1-201ENST00000562409 MTMR2Q13614 643 aa11.36□□□□□ -0.59
AC009090.1-201ENST00000562409 GOPCQ9HD26 462 aa11.36□□□□□ -0.59
AC009090.1-201ENST00000562409 SALL2Q9Y467 1007 aaPredicted RBP11.36□□□□□ -0.59
AC009090.1-201ENST00000562409 EVA1CP58658 441 aa11.35□□□□□ -0.59
AC009090.1-201ENST00000562409 KRT27Q7Z3Y8 459 aa11.35□□□□□ -0.59
AC009090.1-201ENST00000562409 THAP11Q96EK4 314 aa11.35□□□□□ -0.59
AC009090.1-201ENST00000562409 ZBTB3Q9H5J0 574 aa11.35□□□□□ -0.59
AC009090.1-201ENST00000562409 CABP1Q9NZU7 370 aa11.35□□□□□ -0.59
AC009090.1-201ENST00000562409 ATP7BP35670 1465 aa11.35□□□□□ -0.59
AC009090.1-201ENST00000562409 POLR3AO14802 1390 aaPredicted RBP11.34□□□□□ -0.59
AC009090.1-201ENST00000562409 CHRNA2Q15822 529 aa11.34□□□□□ -0.59
AC009090.1-201ENST00000562409 TMEM132AQ24JP5 1023 aa11.34□□□□□ -0.59
AC009090.1-201ENST00000562409 NLRP13Q86W25 1043 aa11.34□□□□□ -0.59
AC009090.1-201ENST00000562409 USB1Q9BQ65 265 aaKnown RBP11.34□□□□□ -0.59
AC009090.1-201ENST00000562409 STRN4Q9NRL3 753 aa11.34□□□□□ -0.59
AC009090.1-201ENST00000562409 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.34□□□□□ -0.59
AC009090.1-201ENST00000562409 EVC2Q86UK5 1308 aa11.34□□□□□ -0.59
AC009090.1-201ENST00000562409 GLI3P10071 1580 aa11.33□□□□□ -0.6
AC009090.1-201ENST00000562409 ROCK2O75116 1388 aaKnown RBP11.33□□□□□ -0.6
AC009090.1-201ENST00000562409 TRPM3Q9HCF6 1732 aaPredicted RBP11.33□□□□□ -0.6
AC009090.1-201ENST00000562409 QPCTQ16769 361 aa11.33□□□□□ -0.6
AC009090.1-201ENST00000562409 TUSC1Q2TAM9 212 aa11.33□□□□□ -0.6
AC009090.1-201ENST00000562409 PPIP5K1Q6PFW1 1433 aa11.33□□□□□ -0.6
AC009090.1-201ENST00000562409 KIAA0232Q92628 1395 aa11.32□□□□□ -0.6
AC009090.1-201ENST00000562409 PRPF38BQ5VTL8 546 aaKnown RBP11.32□□□□□ -0.6
AC009090.1-201ENST00000562409 RETREG3Q86VR2 466 aa11.32□□□□□ -0.6
AC009090.1-201ENST00000562409 SLC6A16Q9GZN6 736 aa11.32□□□□□ -0.6
AC009090.1-201ENST00000562409 SPATA31A5Q5VU36 1347 aa11.32□□□□□ -0.6
AC009090.1-201ENST00000562409 SPATA31A7Q8IWB4 1347 aa11.32□□□□□ -0.6
AC009090.1-201ENST00000562409 ITSN1Q15811 1721 aa11.32□□□□□ -0.6
AC009090.1-201ENST00000562409 ALS2Q96Q42 1657 aa11.31□□□□□ -0.6
AC009090.1-201ENST00000562409 SPDYE5A6NIY4 337 aa11.31□□□□□ -0.6
AC009090.1-201ENST00000562409 TSC1Q92574 1164 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms