RNA–Protein interactions for RNA: ENST00000561992.5

TCF4-211, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-211ENST00000561992 FEZ1Q99689 392 aa11.87□□□□□ -0.51
TCF4-211ENST00000561992 BABAM1Q9NWV8 329 aa11.87□□□□□ -0.51
TCF4-211ENST00000561992 LIMCH1Q9UPQ0 1083 aa11.87□□□□□ -0.51
TCF4-211ENST00000561992 RAD50Q92878 1312 aa11.87□□□□□ -0.51
TCF4-211ENST00000561992 DCTN1Q14203 1278 aa11.86□□□□□ -0.51
TCF4-211ENST00000561992 ZSCAN31Q96LW9 406 aaPredicted RBP11.86□□□□□ -0.51
TCF4-211ENST00000561992 STK31Q9BXU1 1019 aa11.86□□□□□ -0.51
TCF4-211ENST00000561992 A2ML1A8K2U0 1454 aa11.86□□□□□ -0.51
TCF4-211ENST00000561992 APBB1O00213 710 aa11.86□□□□□ -0.51
TCF4-211ENST00000561992 CTIFO43310 598 aaKnown RBP11.86□□□□□ -0.51
TCF4-211ENST00000561992 STX6O43752 255 aa11.86□□□□□ -0.51
TCF4-211ENST00000561992 F13A1P00488 732 aa11.86□□□□□ -0.51
TCF4-211ENST00000561992 EIF4A2Q14240 407 aaKnown RBP11.86□□□□□ -0.51
TCF4-211ENST00000561992 FOXD4L5Q5VV16 416 aaPredicted RBP11.86□□□□□ -0.51
TCF4-211ENST00000561992 SULT6B1Q6IMI4 303 aa11.86□□□□□ -0.51
TCF4-211ENST00000561992 FOXD4L4Q8WXT5 416 aaPredicted RBP11.86□□□□□ -0.51
TCF4-211ENST00000561992 ANKRD7Q92527 254 aa11.86□□□□□ -0.51
TCF4-211ENST00000561992 TTC14Q96N46 770 aa11.86□□□□□ -0.51
TCF4-211ENST00000561992 CCDC171Q6TFL3 1326 aa11.86□□□□□ -0.51
TCF4-211ENST00000561992 TRIM6-TRIM34B2RNG4 842 aa11.85□□□□□ -0.51
TCF4-211ENST00000561992 ATXN8OSP0DMR3 200 aa11.85□□□□□ -0.51
TCF4-211ENST00000561992 PDCL2Q8N4E4 241 aa11.85□□□□□ -0.51
TCF4-211ENST00000561992 RTF1Q92541 710 aaKnown RBP11.85□□□□□ -0.51
TCF4-211ENST00000561992 NUDT16Q96DE0 195 aaKnown RBP11.85□□□□□ -0.51
TCF4-211ENST00000561992 SH2B1Q9NRF2 756 aaPredicted RBP11.85□□□□□ -0.51
TCF4-211ENST00000561992 OVOS2A0A0J9YW53 1432 aa11.85□□□□□ -0.51
TCF4-211ENST00000561992 OVOS2Q6IE36 1432 aa11.85□□□□□ -0.51
TCF4-211ENST00000561992 FBLN1P23142 703 aa11.85□□□□□ -0.51
TCF4-211ENST00000561992 TAF3Q5VWG9 929 aa11.85□□□□□ -0.51
TCF4-211ENST00000561992 TM6SF1Q9BZW5 370 aa11.85□□□□□ -0.51
TCF4-211ENST00000561992 NALCNQ8IZF0 1738 aa11.85□□□□□ -0.51
TCF4-211ENST00000561992 USP31Q70CQ4 1352 aa11.84□□□□□ -0.51
TCF4-211ENST00000561992 SGSM2O43147 1006 aa11.84□□□□□ -0.51
TCF4-211ENST00000561992 CCDC192P0DO97 292 aa11.84□□□□□ -0.51
TCF4-211ENST00000561992 HCLS1P14317 486 aaPredicted RBP11.84□□□□□ -0.51
TCF4-211ENST00000561992 KRT24Q2M2I5 525 aa11.84□□□□□ -0.51
TCF4-211ENST00000561992 CCDC30Q5VVM6 783 aa11.84□□□□□ -0.51
TCF4-211ENST00000561992 RILPL2Q969X0 211 aa11.84□□□□□ -0.51
TCF4-211ENST00000561992 CHAMP1Q96JM3 812 aa11.84□□□□□ -0.51
TCF4-211ENST00000561992 SMC3Q9UQE7 1217 aa11.84□□□□□ -0.51
TCF4-211ENST00000561992 XRN1Q8IZH2 1706 aaKnown RBP11.84□□□□□ -0.51
TCF4-211ENST00000561992 AGLP35573 1532 aa11.84□□□□□ -0.51
TCF4-211ENST00000561992 BCL2L12Q9HB09 334 aa11.84□□□□□ -0.51
TCF4-211ENST00000561992 STAG3Q9UJ98 1225 aa11.84□□□□□ -0.51
TCF4-211ENST00000561992 EXOC6BQ9Y2D4 811 aa11.84□□□□□ -0.51
TCF4-211ENST00000561992 ELP1O95163 1332 aa11.83□□□□□ -0.51
TCF4-211ENST00000561992 LRRC37A3O60309 1634 aa11.83□□□□□ -0.51
TCF4-211ENST00000561992 SYT1P21579 422 aa11.83□□□□□ -0.52
TCF4-211ENST00000561992 RRS1Q15050 365 aaKnown RBP11.83□□□□□ -0.52
TCF4-211ENST00000561992 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.83□□□□□ -0.52
TCF4-211ENST00000561992 SSH3Q8TE77 659 aa11.83□□□□□ -0.52
TCF4-211ENST00000561992 TTC12Q9H892 705 aaPredicted RBP11.83□□□□□ -0.52
TCF4-211ENST00000561992 TSPYL4Q9UJ04 414 aa11.83□□□□□ -0.52
TCF4-211ENST00000561992 CNPY2Q9Y2B0 182 aa11.83□□□□□ -0.52
TCF4-211ENST00000561992 USP42Q9H9J4 1324 aaKnown RBP11.83□□□□□ -0.52
TCF4-211ENST00000561992 FAM208AQ9UK61 1670 aaKnown RBP11.82□□□□□ -0.52
TCF4-211ENST00000561992 CRYBG1Q9Y4K1 1723 aa11.82□□□□□ -0.52
TCF4-211ENST00000561992 CAVIN2O95810 425 aa11.82□□□□□ -0.52
TCF4-211ENST00000561992 HSP90AB4PQ58FF6 505 aa11.82□□□□□ -0.52
TCF4-211ENST00000561992 PPP4R3BQ5MIZ7 849 aa11.82□□□□□ -0.52
TCF4-211ENST00000561992 VPS53Q5VIR6 699 aa11.82□□□□□ -0.52
TCF4-211ENST00000561992 MCM10Q7L590 875 aa11.82□□□□□ -0.52
TCF4-211ENST00000561992 WAPLQ7Z5K2 1190 aa11.82□□□□□ -0.52
TCF4-211ENST00000561992 CNTROBQ8N137 903 aa11.82□□□□□ -0.52
TCF4-211ENST00000561992 RUFY2Q8WXA3 655 aa11.82□□□□□ -0.52
TCF4-211ENST00000561992 SNX14Q9Y5W7 946 aa11.82□□□□□ -0.52
TCF4-211ENST00000561992 KDRP35968 1356 aa11.82□□□□□ -0.52
TCF4-211ENST00000561992 MAP3K5Q99683 1374 aa11.82□□□□□ -0.52
TCF4-211ENST00000561992 SLC4A10Q6U841 1118 aa11.82□□□□□ -0.52
TCF4-211ENST00000561992 FAM200AQ8TCP9 573 aa11.82□□□□□ -0.52
TCF4-211ENST00000561992 KCNB2Q92953 911 aa11.82□□□□□ -0.52
TCF4-211ENST00000561992 UPF3BQ9BZI7 483 aaKnown RBP11.82□□□□□ -0.52
TCF4-211ENST00000561992 ADGRL3Q9HAR2 1447 aa11.82□□□□□ -0.52
TCF4-211ENST00000561992 FLIIQ13045 1269 aa11.81□□□□□ -0.52
TCF4-211ENST00000561992 LSG1Q9H089 658 aaKnown RBP11.81□□□□□ -0.52
TCF4-211ENST00000561992 GDPD2Q9HCC8 539 aa11.81□□□□□ -0.52
TCF4-211ENST00000561992 NRXN3Q9Y4C0 1643 aa11.81□□□□□ -0.52
TCF4-211ENST00000561992 CACNA1FO60840 1977 aa11.81□□□□□ -0.52
TCF4-211ENST00000561992 TTC41PQ6P2S7 1318 aa11.81□□□□□ -0.52
TCF4-211ENST00000561992 RAPGEF3O95398 923 aa11.81□□□□□ -0.52
TCF4-211ENST00000561992 POLA2Q14181 598 aa11.81□□□□□ -0.52
TCF4-211ENST00000561992 PAXBP1Q9Y5B6 917 aa11.81□□□□□ -0.52
TCF4-211ENST00000561992 PDCP20941 246 aa11.8□□□□□ -0.52
TCF4-211ENST00000561992 HDGFP51858 240 aaKnown RBP11.8□□□□□ -0.52
TCF4-211ENST00000561992 AK2P54819 239 aa11.8□□□□□ -0.52
TCF4-211ENST00000561992 G2E3Q7L622 706 aa11.8□□□□□ -0.52
TCF4-211ENST00000561992 KIF1BPQ96EK5 621 aa11.8□□□□□ -0.52
TCF4-211ENST00000561992 OGFRQ9NZT2 677 aa11.8□□□□□ -0.52
TCF4-211ENST00000561992 ZRANB1Q9UGI0 708 aa11.8□□□□□ -0.52
TCF4-211ENST00000561992 TOPAZ1Q8N9V7 1692 aa11.8□□□□□ -0.52
TCF4-211ENST00000561992 PNMA6EA0A0J9YXQ4 647 aa11.79□□□□□ -0.52
TCF4-211ENST00000561992 PLEKHG3A1L390 1219 aa11.79□□□□□ -0.52
TCF4-211ENST00000561992 SMTNL1A8MU46 457 aa11.79□□□□□ -0.52
TCF4-211ENST00000561992 FAM193AP78312 1265 aa11.79□□□□□ -0.52
TCF4-211ENST00000561992 RUFY3Q7L099 469 aa11.79□□□□□ -0.52
TCF4-211ENST00000561992 ZNF830Q96NB3 372 aaPredicted RBP11.79□□□□□ -0.52
TCF4-211ENST00000561992 MTMR6Q9Y217 621 aa11.79□□□□□ -0.52
TCF4-211ENST00000561992 F6X3S4 739 aa11.79□□□□□ -0.52
TCF4-211ENST00000561992 RIOK3O14730 519 aaKnown RBP11.79□□□□□ -0.52
TCF4-211ENST00000561992 UBTFL1P0CB47 393 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms