RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 YBX3P16989 372 aaKnown RBP eCLIP23.32■■□□□ 1.326e-6■□□□□ 10.6
SMAD3-210ENST00000559092 TGFB2P61812 414 aa23.32■■□□□ 1.32
SMAD3-210ENST00000559092 NFE2L2Q16236 605 aa23.32■■□□□ 1.32
SMAD3-210ENST00000559092 A0A087WZG4 1122 aa23.31■■□□□ 1.32
SMAD3-210ENST00000559092 EIF5P55010 431 aaKnown RBP23.31■■□□□ 1.32
SMAD3-210ENST00000559092 TAF7Q15545 349 aaPredicted RBP23.31■■□□□ 1.32
SMAD3-210ENST00000559092 MAPK8IP3Q9UPT6 1336 aa23.31■■□□□ 1.32
SMAD3-210ENST00000559092 KCNQ3O43525 872 aa23.3■■□□□ 1.32
SMAD3-210ENST00000559092 CANXP27824 592 aaKnown RBP23.3■■□□□ 1.32
SMAD3-210ENST00000559092 TM4SF1P30408 202 aa23.3■■□□□ 1.32
SMAD3-210ENST00000559092 DCTN1Q14203 1278 aa23.3■■□□□ 1.32
SMAD3-210ENST00000559092 USPL1Q5W0Q7 1092 aa23.3■■□□□ 1.32
SMAD3-210ENST00000559092 COL15A1P39059 1388 aa23.29■■□□□ 1.32
SMAD3-210ENST00000559092 PNISRQ8TF01 805 aaKnown RBP23.28■■□□□ 1.32
SMAD3-210ENST00000559092 UBR2Q8IWV8 1755 aa23.27■■□□□ 1.32
SMAD3-210ENST00000559092 SNRPA1P09661 255 aaKnown RBP23.27■■□□□ 1.32
SMAD3-210ENST00000559092 IL6STP40189 918 aaPredicted RBP23.27■■□□□ 1.32
SMAD3-210ENST00000559092 DDR1Q08345 913 aa23.26■■□□□ 1.31
SMAD3-210ENST00000559092 C10orf71Q711Q0 1435 aa23.25■■□□□ 1.31
SMAD3-210ENST00000559092 POLRMTO00411 1230 aaKnown RBP23.25■■□□□ 1.31
SMAD3-210ENST00000559092 PRKRIP1Q9H875 184 aaPredicted RBP23.25■■□□□ 1.31
SMAD3-210ENST00000559092 SIPA1L3O60292 1781 aaPredicted RBP23.24■■□□□ 1.31
SMAD3-210ENST00000559092 A1BGP04217 495 aa23.24■■□□□ 1.31
SMAD3-210ENST00000559092 NPM2Q86SE8 214 aaKnown RBP23.24■■□□□ 1.31
SMAD3-210ENST00000559092 BCL2L12Q9HB09 334 aa23.24■■□□□ 1.31
SMAD3-210ENST00000559092 USP16Q9Y5T5 823 aa23.24■■□□□ 1.31
SMAD3-210ENST00000559092 ZNF784Q8NCA9 323 aaPredicted RBP23.23■■□□□ 1.31
SMAD3-210ENST00000559092 VIRMAQ69YN4 1812 aaKnown RBP23.23■■□□□ 1.31
SMAD3-210ENST00000559092 A0A0G2JLW4 131 aa23.22■■□□□ 1.31
SMAD3-210ENST00000559092 NFIXQ14938 502 aa23.22■■□□□ 1.31
SMAD3-210ENST00000559092 C4AP0C0L4 1744 aa23.22■■□□□ 1.31
SMAD3-210ENST00000559092 MIS18AQ9NYP9 233 aa23.21■■□□□ 1.31
SMAD3-210ENST00000559092 PXDNLA1KZ92 1463 aa23.21■■□□□ 1.31
SMAD3-210ENST00000559092 DPEP1P16444 411 aa23.2■■□□□ 1.3
SMAD3-210ENST00000559092 RIPK4P57078 832 aa23.2■■□□□ 1.3
SMAD3-210ENST00000559092 WDR43Q15061 677 aaKnown RBP eCLIP23.2■■□□□ 1.3
SMAD3-210ENST00000559092 TMPOP42166 694 aaKnown RBP23.19■■□□□ 1.3
SMAD3-210ENST00000559092 LMOD3Q0VAK6 560 aa23.19■■□□□ 1.3
SMAD3-210ENST00000559092 PRAMEF22A3QJZ6 481 aa23.18■■□□□ 1.3
SMAD3-210ENST00000559092 BABAM1Q9NWV8 329 aa23.18■■□□□ 1.3
SMAD3-210ENST00000559092 TBC1D2BQ9UPU7 963 aa23.18■■□□□ 1.3
SMAD3-210ENST00000559092 ZNF330Q9Y3S2 320 aaPredicted RBP23.18■■□□□ 1.3
SMAD3-210ENST00000559092 SERPINB2P05120 415 aa23.17■■□□□ 1.3
SMAD3-210ENST00000559092 KCNA3P22001 575 aa23.17■■□□□ 1.3
SMAD3-210ENST00000559092 RUNDC1Q96C34 613 aa23.17■■□□□ 1.3
SMAD3-210ENST00000559092 THUMPD2Q9BTF0 503 aaKnown RBP23.17■■□□□ 1.3
SMAD3-210ENST00000559092 PIM2Q9P1W9 311 aa23.16■■□□□ 1.3
SMAD3-210ENST00000559092 RGL2O15211 777 aa23.15■■□□□ 1.3
SMAD3-210ENST00000559092 GIGYF1O75420 1035 aaPredicted RBP23.15■■□□□ 1.3
SMAD3-210ENST00000559092 CAMTA2O94983 1202 aa23.15■■□□□ 1.3
SMAD3-210ENST00000559092 EIF4A1P60842 406 aaKnown RBP23.15■■□□□ 1.3
SMAD3-210ENST00000559092 DZIP3Q86Y13 1208 aaKnown RBP23.15■■□□□ 1.3
SMAD3-210ENST00000559092 WWC3Q9ULE0 1092 aa23.15■■□□□ 1.3
SMAD3-210ENST00000559092 ADAMTS8Q9UP79 889 aa23.15■■□□□ 1.3
SMAD3-210ENST00000559092 BCS1LQ9Y276 419 aa23.15■■□□□ 1.3
SMAD3-210ENST00000559092 KIF13BQ9NQT8 1826 aa23.15■■□□□ 1.3
SMAD3-210ENST00000559092 CLEC4GQ6UXB4 293 aa23.14■■□□□ 1.29
SMAD3-210ENST00000559092 NBPF26B4DH59 902 aa23.13■■□□□ 1.29
SMAD3-210ENST00000559092 TBC1D9BQ66K14 1250 aa23.13■■□□□ 1.29
SMAD3-210ENST00000559092 NBPF10Q6P3W6 841 aaKnown RBP23.13■■□□□ 1.29
SMAD3-210ENST00000559092 NBPF15Q8N660 670 aa23.13■■□□□ 1.29
SMAD3-210ENST00000559092 CHD4Q14839 1912 aa23.12■■□□□ 1.29
SMAD3-210ENST00000559092 DALRD3Q5D0E6 543 aaKnown RBP23.12■■□□□ 1.29
SMAD3-210ENST00000559092 BICDL1Q6ZP65 573 aa23.12■■□□□ 1.29
SMAD3-210ENST00000559092 CCDC146Q8IYE0 955 aa23.12■■□□□ 1.29
SMAD3-210ENST00000559092 SETDB2Q96T68 719 aa23.12■■□□□ 1.29
SMAD3-210ENST00000559092 TSPYL4Q9UJ04 414 aa23.12■■□□□ 1.29
SMAD3-210ENST00000559092 ZNF652Q9Y2D9 606 aa23.11■■□□□ 1.29
SMAD3-210ENST00000559092 ZNF316A6NFI3 1004 aaPredicted RBP23.1■■□□□ 1.29
SMAD3-210ENST00000559092 PIP4K2AP48426 406 aaPredicted RBP23.1■■□□□ 1.29
SMAD3-210ENST00000559092 PDZRN3Q9UPQ7 1066 aa23.1■■□□□ 1.29
SMAD3-210ENST00000559092 CHRNA5P30532 468 aa23.09■■□□□ 1.29
SMAD3-210ENST00000559092 CARMIL3Q8ND23 1372 aa23.09■■□□□ 1.29
SMAD3-210ENST00000559092 NEUROD2Q15784 382 aa23.08■■□□□ 1.29
SMAD3-210ENST00000559092 BRIP1Q9BX63 1249 aa23.08■■□□□ 1.29
SMAD3-210ENST00000559092 RRP7AQ9Y3A4 280 aaKnown RBP23.08■■□□□ 1.29
SMAD3-210ENST00000559092 ARHGAP27Q6ZUM4 889 aa23.07■■□□□ 1.28
SMAD3-210ENST00000559092 TRIM35Q9UPQ4 493 aa23.07■■□□□ 1.28
SMAD3-210ENST00000559092 KIAA1551Q9HCM1 1747 aa23.07■■□□□ 1.28
SMAD3-210ENST00000559092 ERBB4Q15303 1308 aa23.07■■□□□ 1.28
SMAD3-210ENST00000559092 H0YIN7 160 aa23.06■■□□□ 1.28
SMAD3-210ENST00000559092 PDE6BP35913 854 aa23.06■■□□□ 1.28
SMAD3-210ENST00000559092 CHL1O00533 1208 aa23.05■■□□□ 1.28
SMAD3-210ENST00000559092 PRR5LQ6MZQ0 368 aa23.05■■□□□ 1.28
SMAD3-210ENST00000559092 C2CD5Q86YS7 1000 aa23.05■■□□□ 1.28
SMAD3-210ENST00000559092 DLG5Q8TDM6 1919 aa23.04■■□□□ 1.28
SMAD3-210ENST00000559092 ERVV-1B6SEH8 477 aa23.04■■□□□ 1.28
SMAD3-210ENST00000559092 CNBD1Q8NA66 436 aa23.04■■□□□ 1.28
SMAD3-210ENST00000559092 ADCY9O60503 1353 aa23.03■■□□□ 1.28
SMAD3-210ENST00000559092 NRXN2Q9P2S2 1712 aa23.03■■□□□ 1.28
SMAD3-210ENST00000559092 TTLL6Q8N841 843 aa23.03■■□□□ 1.28
SMAD3-210ENST00000559092 NPHP1O15259 732 aa23.02■■□□□ 1.28
SMAD3-210ENST00000559092 ST5P78524 1137 aa23.02■■□□□ 1.28
SMAD3-210ENST00000559092 KDM3BQ7LBC6 1761 aa23.01■■□□□ 1.27
SMAD3-210ENST00000559092 N4BP2Q86UW6 1770 aaPredicted RBP23.01■■□□□ 1.27
SMAD3-210ENST00000559092 ATP10DQ9P241 1426 aa23.01■■□□□ 1.27
SMAD3-210ENST00000559092 SCN7AQ01118 1682 aa23.01■■□□□ 1.27
SMAD3-210ENST00000559092 TPTE2Q6XPS3 522 aa23.01■■□□□ 1.27
SMAD3-210ENST00000559092 NBPF5PQ86XG9 351 aaPredicted RBP23.01■■□□□ 1.27
SMAD3-210ENST00000559092 NIP7Q9Y221 180 aaKnown RBP eCLIP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms