RNA–Protein interactions for RNA: ENST00000559052.1

AC009660.1-201, humanhuman

BASIC

Gene AC009660.1, Length 748 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009660.1-201ENST00000559052 USP42Q9H9J4 1324 aaKnown RBP13.74□□□□□ -0.21
AC009660.1-201ENST00000559052 NRXN2Q9P2S2 1712 aa13.74□□□□□ -0.21
AC009660.1-201ENST00000559052 GYS1P13807 737 aa13.74□□□□□ -0.21
AC009660.1-201ENST00000559052 NLGN1Q8N2Q7 840 aa13.74□□□□□ -0.21
AC009660.1-201ENST00000559052 RTF1Q92541 710 aaKnown RBP13.74□□□□□ -0.21
AC009660.1-201ENST00000559052 NEFMP07197 916 aa13.73□□□□□ -0.21
AC009660.1-201ENST00000559052 RFC4P35249 363 aa13.73□□□□□ -0.21
AC009660.1-201ENST00000559052 NLGN2Q8NFZ4 835 aa13.73□□□□□ -0.21
AC009660.1-201ENST00000559052 ZNF496Q96IT1 587 aaPredicted RBP13.73□□□□□ -0.21
AC009660.1-201ENST00000559052 TEX13AQ9BXU3 409 aaPredicted RBP13.73□□□□□ -0.21
AC009660.1-201ENST00000559052 PRKRIP1Q9H875 184 aaPredicted RBP13.73□□□□□ -0.21
AC009660.1-201ENST00000559052 AFDNP55196 1824 aaKnown RBP13.73□□□□□ -0.21
AC009660.1-201ENST00000559052 COL15A1P39059 1388 aa13.72□□□□□ -0.21
AC009660.1-201ENST00000559052 BTBD11A6QL63 1104 aa13.72□□□□□ -0.21
AC009660.1-201ENST00000559052 NFE2L2Q16236 605 aa13.72□□□□□ -0.21
AC009660.1-201ENST00000559052 MCM10Q7L590 875 aa13.72□□□□□ -0.21
AC009660.1-201ENST00000559052 FMNL2Q96PY5 1086 aa13.72□□□□□ -0.21
AC009660.1-201ENST00000559052 C10orf71Q711Q0 1435 aa13.72□□□□□ -0.21
AC009660.1-201ENST00000559052 N4BP2Q86UW6 1770 aaPredicted RBP13.71□□□□□ -0.21
AC009660.1-201ENST00000559052 MMP10P09238 476 aa13.71□□□□□ -0.21
AC009660.1-201ENST00000559052 KLHL34Q8N239 644 aa13.71□□□□□ -0.21
AC009660.1-201ENST00000559052 ZBTB1Q9Y2K1 713 aa13.71□□□□□ -0.21
AC009660.1-201ENST00000559052 UTRNP46939 3433 aa13.71□□□□□ -0.22
AC009660.1-201ENST00000559052 MAPK8IP3Q9UPT6 1336 aa13.7□□□□□ -0.22
AC009660.1-201ENST00000559052 STARD3NLO95772 234 aa13.7□□□□□ -0.22
AC009660.1-201ENST00000559052 GOLGB1Q14789 3259 aaKnown RBP13.7□□□□□ -0.22
AC009660.1-201ENST00000559052 EIF5P55010 431 aaKnown RBP13.69□□□□□ -0.22
AC009660.1-201ENST00000559052 DCTN1Q14203 1278 aa13.69□□□□□ -0.22
AC009660.1-201ENST00000559052 NARFQ9UHQ1 456 aa13.69□□□□□ -0.22
AC009660.1-201ENST00000559052 DLEC1Q9Y238 1755 aa13.68□□□□□ -0.22
AC009660.1-201ENST00000559052 PXDNLA1KZ92 1463 aa13.68□□□□□ -0.22
AC009660.1-201ENST00000559052 KCNQ3O43525 872 aa13.68□□□□□ -0.22
AC009660.1-201ENST00000559052 TAF7Q15545 349 aaPredicted RBP13.68□□□□□ -0.22
AC009660.1-201ENST00000559052 PNISRQ8TF01 805 aaKnown RBP13.68□□□□□ -0.22
AC009660.1-201ENST00000559052 SRP68Q9UHB9 627 aaKnown RBP13.68□□□□□ -0.22
AC009660.1-201ENST00000559052 ARFGEF1Q9Y6D6 1849 aa13.68□□□□□ -0.22
AC009660.1-201ENST00000559052 TM4SF1P30408 202 aa13.67□□□□□ -0.22
AC009660.1-201ENST00000559052 IL6STP40189 918 aaPredicted RBP13.67□□□□□ -0.22
AC009660.1-201ENST00000559052 FKBP8Q14318 412 aa13.67□□□□□ -0.22
AC009660.1-201ENST00000559052 A0A087WZG4 1122 aa13.66□□□□□ -0.22
AC009660.1-201ENST00000559052 ZPR1O75312 459 aa13.66□□□□□ -0.22
AC009660.1-201ENST00000559052 SNRPA1P09661 255 aaKnown RBP13.66□□□□□ -0.22
AC009660.1-201ENST00000559052 YY1P25490 414 aa13.66□□□□□ -0.22
AC009660.1-201ENST00000559052 GPR162Q16538 588 aa13.66□□□□□ -0.22
AC009660.1-201ENST00000559052 USPL1Q5W0Q7 1092 aa13.66□□□□□ -0.22
AC009660.1-201ENST00000559052 PARP3Q9Y6F1 533 aa13.66□□□□□ -0.22
AC009660.1-201ENST00000559052 ZNF316A6NFI3 1004 aaPredicted RBP13.65□□□□□ -0.22
AC009660.1-201ENST00000559052 POLRMTO00411 1230 aaKnown RBP13.65□□□□□ -0.22
AC009660.1-201ENST00000559052 YBX3P16989 372 aaKnown RBP eCLIP13.65□□□□□ -0.22
AC009660.1-201ENST00000559052 CANXP27824 592 aaKnown RBP13.65□□□□□ -0.22
AC009660.1-201ENST00000559052 TMPOP42166 694 aaKnown RBP13.65□□□□□ -0.22
AC009660.1-201ENST00000559052 TGFB2P61812 414 aa13.65□□□□□ -0.22
AC009660.1-201ENST00000559052 DDR1Q08345 913 aa13.65□□□□□ -0.22
AC009660.1-201ENST00000559052 WDR43Q15061 677 aaKnown RBP eCLIP13.65□□□□□ -0.22
AC009660.1-201ENST00000559052 BCL2L12Q9HB09 334 aa13.65□□□□□ -0.22
AC009660.1-201ENST00000559052 ANKRD31Q8N7Z5 1873 aa13.64□□□□□ -0.23
AC009660.1-201ENST00000559052 GRIN3BO60391 1043 aa13.64□□□□□ -0.23
AC009660.1-201ENST00000559052 LMOD3Q0VAK6 560 aa13.64□□□□□ -0.23
AC009660.1-201ENST00000559052 RUNDC1Q96C34 613 aa13.64□□□□□ -0.23
AC009660.1-201ENST00000559052 BABAM1Q9NWV8 329 aa13.64□□□□□ -0.23
AC009660.1-201ENST00000559052 USP16Q9Y5T5 823 aa13.64□□□□□ -0.23
AC009660.1-201ENST00000559052 A1BGP04217 495 aa13.63□□□□□ -0.23
AC009660.1-201ENST00000559052 RIPK4P57078 832 aa13.63□□□□□ -0.23
AC009660.1-201ENST00000559052 PRAMEF22A3QJZ6 481 aa13.62□□□□□ -0.23
AC009660.1-201ENST00000559052 RGL2O15211 777 aa13.62□□□□□ -0.23
AC009660.1-201ENST00000559052 EIF4A1P60842 406 aaKnown RBP13.62□□□□□ -0.23
AC009660.1-201ENST00000559052 NFIXQ14938 502 aa13.62□□□□□ -0.23
AC009660.1-201ENST00000559052 THUMPD2Q9BTF0 503 aaKnown RBP13.62□□□□□ -0.23
AC009660.1-201ENST00000559052 ADAMTS8Q9UP79 889 aa13.62□□□□□ -0.23
AC009660.1-201ENST00000559052 NUP98P52948 1817 aa13.62□□□□□ -0.23
AC009660.1-201ENST00000559052 PELP1Q8IZL8 1130 aaKnown RBP13.61□□□□□ -0.23
AC009660.1-201ENST00000559052 FOXD4L1Q9NU39 408 aa13.61□□□□□ -0.23
AC009660.1-201ENST00000559052 GIGYF1O75420 1035 aaPredicted RBP13.6□□□□□ -0.23
AC009660.1-201ENST00000559052 CAMTA2O94983 1202 aa13.6□□□□□ -0.23
AC009660.1-201ENST00000559052 CCDC146Q8IYE0 955 aa13.6□□□□□ -0.23
AC009660.1-201ENST00000559052 MIS18AQ9NYP9 233 aa13.6□□□□□ -0.23
AC009660.1-201ENST00000559052 ARFGEF2Q9Y6D5 1785 aa13.6□□□□□ -0.23
AC009660.1-201ENST00000559052 COL11A2P13942 1736 aaPredicted RBP13.59□□□□□ -0.23
AC009660.1-201ENST00000559052 NBPF26B4DH59 902 aa13.59□□□□□ -0.23
AC009660.1-201ENST00000559052 NBPF10Q6P3W6 841 aaKnown RBP13.59□□□□□ -0.23
AC009660.1-201ENST00000559052 DZIP3Q86Y13 1208 aaKnown RBP13.59□□□□□ -0.23
AC009660.1-201ENST00000559052 NBPF15Q8N660 670 aa13.59□□□□□ -0.23
AC009660.1-201ENST00000559052 TRIM35Q9UPQ4 493 aa13.59□□□□□ -0.23
AC009660.1-201ENST00000559052 ERBB4Q15303 1308 aa13.59□□□□□ -0.23
AC009660.1-201ENST00000559052 CARMIL3Q8ND23 1372 aa13.58□□□□□ -0.23
AC009660.1-201ENST00000559052 SERPINB2P05120 415 aa13.58□□□□□ -0.24
AC009660.1-201ENST00000559052 DPEP1P16444 411 aa13.58□□□□□ -0.24
AC009660.1-201ENST00000559052 KCNA3P22001 575 aa13.58□□□□□ -0.24
AC009660.1-201ENST00000559052 CLEC4GQ6UXB4 293 aa13.58□□□□□ -0.24
AC009660.1-201ENST00000559052 NPM2Q86SE8 214 aaKnown RBP13.58□□□□□ -0.24
AC009660.1-201ENST00000559052 TSPYL4Q9UJ04 414 aa13.58□□□□□ -0.24
AC009660.1-201ENST00000559052 TBC1D2BQ9UPU7 963 aa13.58□□□□□ -0.24
AC009660.1-201ENST00000559052 A0A0G2JLW4 131 aa13.57□□□□□ -0.24
AC009660.1-201ENST00000559052 TBC1D9BQ66K14 1250 aa13.57□□□□□ -0.24
AC009660.1-201ENST00000559052 ZNF330Q9Y3S2 320 aaPredicted RBP13.57□□□□□ -0.24
AC009660.1-201ENST00000559052 ANKRD36CQ5JPF3 1778 aa13.57□□□□□ -0.24
AC009660.1-201ENST00000559052 ADCY9O60503 1353 aa13.57□□□□□ -0.24
AC009660.1-201ENST00000559052 SBF1O95248 1867 aa13.57□□□□□ -0.24
AC009660.1-201ENST00000559052 CHL1O00533 1208 aa13.56□□□□□ -0.24
AC009660.1-201ENST00000559052 PIP4K2AP48426 406 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms