RNA–Protein interactions for RNA: ENST00000559052.1

AC009660.1-201, humanhuman

BASIC

Gene AC009660.1, Length 748 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009660.1-201ENST00000559052 NISCHQ9Y2I1 1504 aa25.63■■□□□ 1.69
AC009660.1-201ENST00000559052 CCDC180Q9P1Z9 1646 aa22.97■■□□□ 1.27
AC009660.1-201ENST00000559052 ABCC9O60706 1549 aa22.43■■□□□ 1.18
AC009660.1-201ENST00000559052 AEBP2Q6ZN18 517 aaPredicted RBP22.03■■□□□ 1.12
AC009660.1-201ENST00000559052 RB1CC1Q8TDY2 1594 aa21.61■■□□□ 1.05
AC009660.1-201ENST00000559052 NACADO15069 1562 aa21.57■■□□□ 1.04
AC009660.1-201ENST00000559052 MYO15BQ96JP2 1530 aa21.44■■□□□ 1.02
AC009660.1-201ENST00000559052 ZCCHC6Q5VYS8 1495 aaKnown RBP21.34■■□□□ 1.01
AC009660.1-201ENST00000559052 DCAF1Q9Y4B6 1507 aa21.27■■□□□ 1
AC009660.1-201ENST00000559052 CHIC1Q5VXU3 224 aa21.26■□□□□ 0.99
AC009660.1-201ENST00000559052 DCAF8L2P0C7V8 631 aa21.23■□□□□ 0.99
AC009660.1-201ENST00000559052 UNC13AQ9UPW8 1703 aa21.21■□□□□ 0.99
AC009660.1-201ENST00000559052 BICRAQ9NZM4 1560 aa20.98■□□□□ 0.95
AC009660.1-201ENST00000559052 PABPN1Q86U42 306 aaKnown RBP eCLIP20.84■□□□□ 0.93
AC009660.1-201ENST00000559052 SHROOM4Q9ULL8 1493 aa20.81■□□□□ 0.92
AC009660.1-201ENST00000559052 SCRIBQ14160 1630 aa20.81■□□□□ 0.92
AC009660.1-201ENST00000559052 DNAJC5BQ9UF47 199 aa20.69■□□□□ 0.9
AC009660.1-201ENST00000559052 EIF4G1Q04637 1599 aaKnown RBP20.42■□□□□ 0.86
AC009660.1-201ENST00000559052 CC2D2AQ9P2K1 1620 aa20.37■□□□□ 0.85
AC009660.1-201ENST00000559052 CECR2Q9BXF3 1484 aa20.2■□□□□ 0.82
AC009660.1-201ENST00000559052 SMARCA4P51532 1647 aa19.94■□□□□ 0.78
AC009660.1-201ENST00000559052 BAZ1AQ9NRL2 1556 aaPredicted RBP19.89■□□□□ 0.77
AC009660.1-201ENST00000559052 NCAPD3P42695 1498 aa19.86■□□□□ 0.77
AC009660.1-201ENST00000559052 SMARCA2P51531 1590 aa19.84■□□□□ 0.77
AC009660.1-201ENST00000559052 ATAD2BQ9ULI0 1458 aa19.83■□□□□ 0.76
AC009660.1-201ENST00000559052 PEG3Q9GZU2 1588 aa19.81■□□□□ 0.76
AC009660.1-201ENST00000559052 HMGXB3Q12766 1538 aa19.81■□□□□ 0.76
AC009660.1-201ENST00000559052 MROH2BQ7Z745 1585 aa19.72■□□□□ 0.75
AC009660.1-201ENST00000559052 BAZ1BQ9UIG0 1483 aaKnown RBP19.65■□□□□ 0.74
AC009660.1-201ENST00000559052 WIZO95785 1651 aa19.52■□□□□ 0.72
AC009660.1-201ENST00000559052 RSF1Q96T23 1441 aaPredicted RBP19.42■□□□□ 0.7
AC009660.1-201ENST00000559052 LAMC3Q9Y6N6 1575 aa19.4■□□□□ 0.7
AC009660.1-201ENST00000559052 NESP48681 1621 aa19.38■□□□□ 0.69
AC009660.1-201ENST00000559052 ERCC6Q03468 1493 aa19.35■□□□□ 0.69
AC009660.1-201ENST00000559052 TOP2AP11388 1531 aaKnown RBP19.33■□□□□ 0.68
AC009660.1-201ENST00000559052 CUX2O14529 1486 aa19.29■□□□□ 0.68
AC009660.1-201ENST00000559052 KIF21AQ7Z4S6 1674 aa19.24■□□□□ 0.67
AC009660.1-201ENST00000559052 THOC2Q8NI27 1593 aaKnown RBP19.23■□□□□ 0.67
AC009660.1-201ENST00000559052 CADPSQ9ULU8 1353 aa19.23■□□□□ 0.67
AC009660.1-201ENST00000559052 PDS5BQ9NTI5 1447 aa19.2■□□□□ 0.66
AC009660.1-201ENST00000559052 CFTRP13569 1480 aa19.12■□□□□ 0.65
AC009660.1-201ENST00000559052 PRDM2Q13029 1718 aa19.11■□□□□ 0.65
AC009660.1-201ENST00000559052 SENP3Q9H4L4 574 aaPredicted RBP19.09■□□□□ 0.65
AC009660.1-201ENST00000559052 CCDC88BA6NC98 1476 aa19.04■□□□□ 0.64
AC009660.1-201ENST00000559052 MRC2Q9UBG0 1479 aa19.04■□□□□ 0.64
AC009660.1-201ENST00000559052 WDR62O43379 1518 aa19.03■□□□□ 0.64
AC009660.1-201ENST00000559052 CEP164Q9UPV0 1460 aa19.03■□□□□ 0.64
AC009660.1-201ENST00000559052 FANCD2Q9BXW9 1451 aa19.02■□□□□ 0.63
AC009660.1-201ENST00000559052 URB2Q14146 1524 aaKnown RBP18.86■□□□□ 0.61
AC009660.1-201ENST00000559052 DNAJC5Q9H3Z4 198 aa18.79■□□□□ 0.6
AC009660.1-201ENST00000559052 ABCC8Q09428 1581 aa18.73■□□□□ 0.59
AC009660.1-201ENST00000559052 PHF23Q9BUL5 403 aaPredicted RBP18.72■□□□□ 0.59
AC009660.1-201ENST00000559052 TOPBP1Q92547 1522 aa18.72■□□□□ 0.59
AC009660.1-201ENST00000559052 DNMBPQ6XZF7 1577 aa18.72■□□□□ 0.59
AC009660.1-201ENST00000559052 IFT140Q96RY7 1462 aa18.65■□□□□ 0.58
AC009660.1-201ENST00000559052 SUPT5HO00267 1087 aaKnown RBP18.64■□□□□ 0.57
AC009660.1-201ENST00000559052 TARBP1Q13395 1621 aaKnown RBP18.58■□□□□ 0.56
AC009660.1-201ENST00000559052 POLA1P09884 1462 aaPredicted RBP18.54■□□□□ 0.56
AC009660.1-201ENST00000559052 ZNF608Q9ULD9 1512 aaPredicted RBP18.54■□□□□ 0.56
AC009660.1-201ENST00000559052 EIF4G3O43432 1585 aaKnown RBP18.53■□□□□ 0.56
AC009660.1-201ENST00000559052 CUX1P39880 1505 aa18.52■□□□□ 0.56
AC009660.1-201ENST00000559052 WDR97A6NE52 1622 aa18.49■□□□□ 0.55
AC009660.1-201ENST00000559052 FGD5Q6ZNL6 1462 aa18.46■□□□□ 0.55
AC009660.1-201ENST00000559052 SOGA1O94964 1423 aa18.41■□□□□ 0.54
AC009660.1-201ENST00000559052 RAD54L2Q9Y4B4 1467 aa18.41■□□□□ 0.54
AC009660.1-201ENST00000559052 BIVM-ERCC5R4GMW8 1640 aa18.4■□□□□ 0.54
AC009660.1-201ENST00000559052 AQRO60306 1485 aaKnown RBP eCLIP18.38■□□□□ 0.53
AC009660.1-201ENST00000559052 TOP2BQ02880 1626 aa18.36■□□□□ 0.53
AC009660.1-201ENST00000559052 CHD1O14646 1710 aa18.35■□□□□ 0.53
AC009660.1-201ENST00000559052 OSCARQ8IYS5 282 aa18.34■□□□□ 0.53
AC009660.1-201ENST00000559052 SYNJ1O43426 1573 aa18.32■□□□□ 0.52
AC009660.1-201ENST00000559052 ABCA10Q8WWZ4 1543 aa18.32■□□□□ 0.52
AC009660.1-201ENST00000559052 PBRM1Q86U86 1689 aa18.31■□□□□ 0.52
AC009660.1-201ENST00000559052 WRNQ14191 1432 aaPredicted RBP eCLIP18.31■□□□□ 0.52
AC009660.1-201ENST00000559052 ABCA5Q8WWZ7 1642 aa18.31■□□□□ 0.52
AC009660.1-201ENST00000559052 TDRD9Q8NDG6 1382 aaKnown RBP18.3■□□□□ 0.52
AC009660.1-201ENST00000559052 GRIN2BQ13224 1484 aa18.26■□□□□ 0.51
AC009660.1-201ENST00000559052 MAGI1Q96QZ7 1491 aaPredicted RBP18.26■□□□□ 0.51
AC009660.1-201ENST00000559052 SNAPC4Q5SXM2 1469 aa18.25■□□□□ 0.51
AC009660.1-201ENST00000559052 GAPVD1Q14C86 1478 aa18.23■□□□□ 0.51
AC009660.1-201ENST00000559052 RIMBP3CA6NJZ7 1639 aa18.18■□□□□ 0.5
AC009660.1-201ENST00000559052 RIMBP3BA6NNM3 1639 aa18.18■□□□□ 0.5
AC009660.1-201ENST00000559052 RIMBP3Q9UFD9 1639 aa18.18■□□□□ 0.5
AC009660.1-201ENST00000559052 SYNJ2O15056 1496 aa18.18■□□□□ 0.5
AC009660.1-201ENST00000559052 ARHGEF11O15085 1522 aa18.13■□□□□ 0.49
AC009660.1-201ENST00000559052 CLASP1Q7Z460 1538 aa18.13■□□□□ 0.49
AC009660.1-201ENST00000559052 ADAMTS12P58397 1594 aa18.12■□□□□ 0.49
AC009660.1-201ENST00000559052 ERICH3Q5RHP9 1530 aa18.11■□□□□ 0.49
AC009660.1-201ENST00000559052 FBLN2P98095 1184 aa18.09■□□□□ 0.49
AC009660.1-201ENST00000559052 CHMP7Q8WUX9 453 aaPredicted RBP18.07■□□□□ 0.48
AC009660.1-201ENST00000559052 GRIN2AQ12879 1464 aa18.04■□□□□ 0.48
AC009660.1-201ENST00000559052 FHAD1B1AJZ9 1412 aa18.03■□□□□ 0.48
AC009660.1-201ENST00000559052 TRIM41Q8WV44 630 aa18■□□□□ 0.47
AC009660.1-201ENST00000559052 NUP160Q12769 1436 aa17.98■□□□□ 0.47
AC009660.1-201ENST00000559052 CEP170Q5SW79 1584 aa17.98■□□□□ 0.47
AC009660.1-201ENST00000559052 ARAP1Q96P48 1450 aa17.97■□□□□ 0.47
AC009660.1-201ENST00000559052 CUL7Q14999 1698 aa17.95■□□□□ 0.46
AC009660.1-201ENST00000559052 KIF27Q86VH2 1401 aa17.93■□□□□ 0.46
AC009660.1-201ENST00000559052 SHROOM2Q13796 1616 aa17.93■□□□□ 0.46
AC009660.1-201ENST00000559052 IGF1RP08069 1367 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms