RNA–Protein interactions for RNA: ENST00000558011.5

AP3S2-204, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 3 BASIC

Gene AP3S2, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-204ENST00000558011 CHMP4AQ9BY43 222 aa20.4■□□□□ 0.86
AP3S2-204ENST00000558011 LRRC4BQ9NT99 713 aa20.4■□□□□ 0.86
AP3S2-204ENST00000558011 BAG6P46379 1132 aa20.39■□□□□ 0.85
AP3S2-204ENST00000558011 RARSP54136 660 aaKnown RBP20.39■□□□□ 0.85
AP3S2-204ENST00000558011 EN1Q05925 392 aaPredicted RBP20.39■□□□□ 0.85
AP3S2-204ENST00000558011 LINC00116Q8NCU8 138 aa20.39■□□□□ 0.85
AP3S2-204ENST00000558011 RCAN3Q9UKA8 241 aa20.39■□□□□ 0.85
AP3S2-204ENST00000558011 TAF1LQ8IZX4 1826 aa20.39■□□□□ 0.85
AP3S2-204ENST00000558011 ALDH1L2Q3SY69 923 aa20.38■□□□□ 0.85
AP3S2-204ENST00000558011 SSH1Q8WYL5 1049 aa20.38■□□□□ 0.85
AP3S2-204ENST00000558011 UPF1Q92900 1129 aaKnown RBP eCLIP20.38■□□□□ 0.855e-8■■■■□ 22.6
AP3S2-204ENST00000558011 CAMKK2Q96RR4 588 aa20.38■□□□□ 0.85
AP3S2-204ENST00000558011 A1BGP04217 495 aa20.37■□□□□ 0.85
AP3S2-204ENST00000558011 EZH2Q15910 746 aaKnown RBP20.37■□□□□ 0.85
AP3S2-204ENST00000558011 STK31Q9BXU1 1019 aa20.37■□□□□ 0.85
AP3S2-204ENST00000558011 CHPF2Q9P2E5 772 aa20.37■□□□□ 0.85
AP3S2-204ENST00000558011 DEFB132Q7Z7B7 95 aa20.36■□□□□ 0.85
AP3S2-204ENST00000558011 BCL2L13Q9BXK5 485 aa20.36■□□□□ 0.85
AP3S2-204ENST00000558011 DBF4Q9UBU7 674 aaPredicted RBP20.36■□□□□ 0.85
AP3S2-204ENST00000558011 ERBB4Q15303 1308 aa20.35■□□□□ 0.85
AP3S2-204ENST00000558011 CRKLP46109 303 aaKnown RBP20.35■□□□□ 0.85
AP3S2-204ENST00000558011 PIP4K2AP48426 406 aaPredicted RBP20.35■□□□□ 0.85
AP3S2-204ENST00000558011 PDIA6Q15084 440 aa20.35■□□□□ 0.85
AP3S2-204ENST00000558011 INTS5Q6P9B9 1019 aaKnown RBP20.35■□□□□ 0.85
AP3S2-204ENST00000558011 MRPL50Q8N5N7 158 aaKnown RBP20.35■□□□□ 0.85
AP3S2-204ENST00000558011 DDX21Q9NR30 783 aaKnown RBP eCLIP20.35■□□□□ 0.85
AP3S2-204ENST00000558011 SMC4Q9NTJ3 1288 aa20.35■□□□□ 0.85
AP3S2-204ENST00000558011 CCDC87Q9NVE4 849 aa20.35■□□□□ 0.85
AP3S2-204ENST00000558011 RREB1Q92766 1687 aa20.35■□□□□ 0.85
AP3S2-204ENST00000558011 C4BP0C0L5 1744 aa20.34■□□□□ 0.85
AP3S2-204ENST00000558011 NBPF26B4DH59 902 aa20.34■□□□□ 0.85
AP3S2-204ENST00000558011 BCAR3O75815 825 aa20.34■□□□□ 0.85
AP3S2-204ENST00000558011 ANXA1P04083 346 aa20.34■□□□□ 0.85
AP3S2-204ENST00000558011 SLC4A2P04920 1241 aa20.34■□□□□ 0.85
AP3S2-204ENST00000558011 PROSER3Q2NL68 480 aa20.34■□□□□ 0.85
AP3S2-204ENST00000558011 NBPF14Q5TI25 921 aa20.34■□□□□ 0.85
AP3S2-204ENST00000558011 NBPF10Q6P3W6 841 aaKnown RBP20.34■□□□□ 0.85
AP3S2-204ENST00000558011 NBPF15Q8N660 670 aa20.34■□□□□ 0.85
AP3S2-204ENST00000558011 CNTNAP4Q9C0A0 1308 aa20.33■□□□□ 0.85
AP3S2-204ENST00000558011 MYL6BP14649 208 aa20.33■□□□□ 0.85
AP3S2-204ENST00000558011 HMGB2P26583 209 aaKnown RBP20.33■□□□□ 0.85
AP3S2-204ENST00000558011 CANXP27824 592 aaKnown RBP20.33■□□□□ 0.85
AP3S2-204ENST00000558011 RC3H1Q5TC82 1133 aaKnown RBP20.33■□□□□ 0.85
AP3S2-204ENST00000558011 ZBTB1Q9Y2K1 713 aa20.33■□□□□ 0.85
AP3S2-204ENST00000558011 HYPKQ9NX55 129 aa20.32■□□□□ 0.84
AP3S2-204ENST00000558011 MYH14Q7Z406 1995 aaKnown RBP20.32■□□□□ 0.84
AP3S2-204ENST00000558011 CACNA1FO60840 1977 aa20.3■□□□□ 0.84
AP3S2-204ENST00000558011 BRPF1P55201 1214 aaPredicted RBP20.3■□□□□ 0.84
AP3S2-204ENST00000558011 G2E3Q7L622 706 aa20.3■□□□□ 0.84
AP3S2-204ENST00000558011 LRP10Q7Z4F1 713 aa20.3■□□□□ 0.84
AP3S2-204ENST00000558011 IL6STP40189 918 aaPredicted RBP20.29■□□□□ 0.84
AP3S2-204ENST00000558011 AK7Q96M32 723 aa20.29■□□□□ 0.84
AP3S2-204ENST00000558011 PHAXQ9H814 394 aaKnown RBP20.29■□□□□ 0.84
AP3S2-204ENST00000558011 NUP188Q5SRE5 1749 aa20.29■□□□□ 0.84
AP3S2-204ENST00000558011 GNPATO15228 680 aa20.28■□□□□ 0.84
AP3S2-204ENST00000558011 NOB1Q9ULX3 412 aaKnown RBP20.28■□□□□ 0.84
AP3S2-204ENST00000558011 RPS6KA4O75676 772 aa20.27■□□□□ 0.84
AP3S2-204ENST00000558011 EIF5P55010 431 aaKnown RBP20.27■□□□□ 0.84
AP3S2-204ENST00000558011 FLIIQ13045 1269 aa20.27■□□□□ 0.84
AP3S2-204ENST00000558011 XAGE3Q8WTP9 111 aa20.27■□□□□ 0.84
AP3S2-204ENST00000558011 FRAT1Q92837 279 aaPredicted RBP20.27■□□□□ 0.84
AP3S2-204ENST00000558011 ZNF330Q9Y3S2 320 aaPredicted RBP20.27■□□□□ 0.84
AP3S2-204ENST00000558011 KIF16BQ96L93 1317 aa20.27■□□□□ 0.83
AP3S2-204ENST00000558011 AIMP1Q12904 312 aaKnown RBP20.26■□□□□ 0.83
AP3S2-204ENST00000558011 ZNF827Q17R98 1081 aa20.26■□□□□ 0.83
AP3S2-204ENST00000558011 COPS6Q7L5N1 327 aa20.26■□□□□ 0.83
AP3S2-204ENST00000558011 AKT1S1Q96B36 256 aa20.26■□□□□ 0.83
AP3S2-204ENST00000558011 RTCBQ9Y3I0 505 aaKnown RBP20.26■□□□□ 0.83
AP3S2-204ENST00000558011 NPM2Q86SE8 214 aaKnown RBP20.25■□□□□ 0.83
AP3S2-204ENST00000558011 SUPT16HQ9Y5B9 1047 aaKnown RBP20.25■□□□□ 0.83
AP3S2-204ENST00000558011 UBR3Q6ZT12 1888 aa20.24■□□□□ 0.83
AP3S2-204ENST00000558011 IPO8O15397 1037 aaKnown RBP20.24■□□□□ 0.83
AP3S2-204ENST00000558011 SMIM5Q71RC9 77 aa20.24■□□□□ 0.83
AP3S2-204ENST00000558011 AMIGO3Q86WK7 504 aa20.24■□□□□ 0.83
AP3S2-204ENST00000558011 PTPRCP08575 1304 aa20.24■□□□□ 0.83
AP3S2-204ENST00000558011 COL15A1P39059 1388 aa20.23■□□□□ 0.83
AP3S2-204ENST00000558011 PLIN1O60240 522 aa20.23■□□□□ 0.83
AP3S2-204ENST00000558011 FKBP5Q13451 457 aaPredicted RBP20.23■□□□□ 0.83
AP3S2-204ENST00000558011 ZKSCAN2Q63HK3 967 aa20.23■□□□□ 0.83
AP3S2-204ENST00000558011 TTLL7Q6ZT98 887 aa20.23■□□□□ 0.83
AP3S2-204ENST00000558011 ARHGAP45Q92619 1136 aa20.23■□□□□ 0.83
AP3S2-204ENST00000558011 ARXQ96QS3 562 aa20.23■□□□□ 0.83
AP3S2-204ENST00000558011 A0A087WZG4 1122 aa20.22■□□□□ 0.83
AP3S2-204ENST00000558011 DDX58O95786 925 aaKnown RBP20.22■□□□□ 0.83
AP3S2-204ENST00000558011 RRP1P56182 461 aaKnown RBP20.22■□□□□ 0.83
AP3S2-204ENST00000558011 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.22■□□□□ 0.83
AP3S2-204ENST00000558011 ANO8Q9HCE9 1232 aaPredicted RBP20.22■□□□□ 0.83
AP3S2-204ENST00000558011 STK32BQ9NY57 414 aa20.22■□□□□ 0.83
AP3S2-204ENST00000558011 TFCP2L1Q9NZI6 479 aa20.22■□□□□ 0.83
AP3S2-204ENST00000558011 TUBGCP6Q96RT7 1819 aa20.21■□□□□ 0.83
AP3S2-204ENST00000558011 PHF14O94880 888 aa20.21■□□□□ 0.83
AP3S2-204ENST00000558011 TRAPPC3LQ5T215 181 aa20.21■□□□□ 0.83
AP3S2-204ENST00000558011 ATF7IPQ6VMQ6 1270 aa20.21■□□□□ 0.83
AP3S2-204ENST00000558011 KIF6Q6ZMV9 814 aa20.21■□□□□ 0.83
AP3S2-204ENST00000558011 DZIP3Q86Y13 1208 aaKnown RBP20.21■□□□□ 0.83
AP3S2-204ENST00000558011 TBC1D2BQ9UPU7 963 aa20.21■□□□□ 0.83
AP3S2-204ENST00000558011 RNF123Q5XPI4 1314 aa20.21■□□□□ 0.83
AP3S2-204ENST00000558011 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.2■□□□□ 0.82
AP3S2-204ENST00000558011 ADRA2BP18089 450 aa20.2■□□□□ 0.82
AP3S2-204ENST00000558011 SSFA2P28290 1259 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms