RNA–Protein interactions for RNA: ENST00000558011.5

AP3S2-204, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 3 BASIC

Gene AP3S2, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-204ENST00000558011 NISCHQ9Y2I1 1504 aa37.44■■■■□ 3.58
AP3S2-204ENST00000558011 CCDC180Q9P1Z9 1646 aa33.01■■■□□ 2.87
AP3S2-204ENST00000558011 ABCC9O60706 1549 aa31.77■■■□□ 2.68
AP3S2-204ENST00000558011 ZCCHC6Q5VYS8 1495 aaKnown RBP31.3■■■□□ 2.6
AP3S2-204ENST00000558011 DCAF8L2P0C7V8 631 aa31.09■■■□□ 2.57
AP3S2-204ENST00000558011 DCAF1Q9Y4B6 1507 aa30.98■■■□□ 2.55
AP3S2-204ENST00000558011 NACADO15069 1562 aa30.9■■■□□ 2.54
AP3S2-204ENST00000558011 MYO15BQ96JP2 1530 aa30.88■■■□□ 2.53
AP3S2-204ENST00000558011 RB1CC1Q8TDY2 1594 aa30.79■■■□□ 2.52
AP3S2-204ENST00000558011 SCRIBQ14160 1630 aa30.21■■■□□ 2.43
AP3S2-204ENST00000558011 UNC13AQ9UPW8 1703 aa30.13■■■□□ 2.41
AP3S2-204ENST00000558011 SHROOM4Q9ULL8 1493 aa29.99■■■□□ 2.39
AP3S2-204ENST00000558011 BICRAQ9NZM4 1560 aa29.86■■■□□ 2.37
AP3S2-204ENST00000558011 PABPN1Q86U42 306 aaKnown RBP eCLIP29.8■■■□□ 2.36
AP3S2-204ENST00000558011 CECR2Q9BXF3 1484 aa29.11■■■□□ 2.25
AP3S2-204ENST00000558011 EIF4G1Q04637 1599 aaKnown RBP29.01■■■□□ 2.24
AP3S2-204ENST00000558011 BAZ1AQ9NRL2 1556 aaPredicted RBP28.96■■■□□ 2.23
AP3S2-204ENST00000558011 SMARCA4P51532 1647 aa28.93■■■□□ 2.22
AP3S2-204ENST00000558011 MROH2BQ7Z745 1585 aa28.88■■■□□ 2.21
AP3S2-204ENST00000558011 RSF1Q96T23 1441 aaPredicted RBP28.76■■■□□ 2.19
AP3S2-204ENST00000558011 CC2D2AQ9P2K1 1620 aa28.76■■■□□ 2.19
AP3S2-204ENST00000558011 DNAJC5BQ9UF47 199 aa28.63■■■□□ 2.17
AP3S2-204ENST00000558011 PEG3Q9GZU2 1588 aa28.62■■■□□ 2.17
AP3S2-204ENST00000558011 WIZO95785 1651 aa28.61■■■□□ 2.17
AP3S2-204ENST00000558011 ATAD2BQ9ULI0 1458 aa28.61■■■□□ 2.17
AP3S2-204ENST00000558011 SMARCA2P51531 1590 aa28.6■■■□□ 2.17
AP3S2-204ENST00000558011 SUPT5HO00267 1087 aaKnown RBP28.51■■■□□ 2.15
AP3S2-204ENST00000558011 NCAPD3P42695 1498 aa28.5■■■□□ 2.15
AP3S2-204ENST00000558011 BAZ1BQ9UIG0 1483 aaKnown RBP28.42■■■□□ 2.14
AP3S2-204ENST00000558011 HMGXB3Q12766 1538 aa28.41■■■□□ 2.14
AP3S2-204ENST00000558011 TOP2AP11388 1531 aaKnown RBP28.32■■■□□ 2.12
AP3S2-204ENST00000558011 CCDC88BA6NC98 1476 aa28■■■□□ 2.07
AP3S2-204ENST00000558011 CADPSQ9ULU8 1353 aa27.71■■■□□ 2.03
AP3S2-204ENST00000558011 CFTRP13569 1480 aa27.67■■■□□ 2.02
AP3S2-204ENST00000558011 NESP48681 1621 aa27.67■■■□□ 2.02
AP3S2-204ENST00000558011 LAMC3Q9Y6N6 1575 aa27.66■■■□□ 2.02
AP3S2-204ENST00000558011 PRDM2Q13029 1718 aa27.53■■■□□ 2
AP3S2-204ENST00000558011 PDS5BQ9NTI5 1447 aa27.45■■□□□ 1.98
AP3S2-204ENST00000558011 FANCD2Q9BXW9 1451 aa27.4■■□□□ 1.98
AP3S2-204ENST00000558011 KIF21AQ7Z4S6 1674 aa27.36■■□□□ 1.97
AP3S2-204ENST00000558011 ERCC6Q03468 1493 aa27.32■■□□□ 1.96
AP3S2-204ENST00000558011 CEP164Q9UPV0 1460 aa27.31■■□□□ 1.96
AP3S2-204ENST00000558011 ABCC8Q09428 1581 aa27.17■■□□□ 1.94
AP3S2-204ENST00000558011 MRC2Q9UBG0 1479 aa27.14■■□□□ 1.94
AP3S2-204ENST00000558011 THOC2Q8NI27 1593 aaKnown RBP27.1■■□□□ 1.93
AP3S2-204ENST00000558011 URB2Q14146 1524 aaKnown RBP27.1■■□□□ 1.93
AP3S2-204ENST00000558011 WRNQ14191 1432 aaPredicted RBP eCLIP27.08■■□□□ 1.93
AP3S2-204ENST00000558011 CUX1P39880 1505 aa27.06■■□□□ 1.92
AP3S2-204ENST00000558011 DNMBPQ6XZF7 1577 aa27.05■■□□□ 1.92
AP3S2-204ENST00000558011 WDR62O43379 1518 aa27.03■■□□□ 1.92
AP3S2-204ENST00000558011 TOPBP1Q92547 1522 aa27.03■■□□□ 1.92
AP3S2-204ENST00000558011 SYNJ1O43426 1573 aa27.01■■□□□ 1.91
AP3S2-204ENST00000558011 TOP2BQ02880 1626 aa26.97■■□□□ 1.91
AP3S2-204ENST00000558011 BIVM-ERCC5R4GMW8 1640 aa26.97■■□□□ 1.91
AP3S2-204ENST00000558011 CHIC1Q5VXU3 224 aa26.94■■□□□ 1.9
AP3S2-204ENST00000558011 TRIM41Q8WV44 630 aa26.88■■□□□ 1.89
AP3S2-204ENST00000558011 FGD5Q6ZNL6 1462 aa26.87■■□□□ 1.89
AP3S2-204ENST00000558011 POLA1P09884 1462 aaPredicted RBP26.83■■□□□ 1.89
AP3S2-204ENST00000558011 CUX2O14529 1486 aa26.8■■□□□ 1.88
AP3S2-204ENST00000558011 SOGA1O94964 1423 aa26.75■■□□□ 1.87
AP3S2-204ENST00000558011 RAD54L2Q9Y4B4 1467 aa26.74■■□□□ 1.87
AP3S2-204ENST00000558011 IFT140Q96RY7 1462 aa26.7■■□□□ 1.87
AP3S2-204ENST00000558011 TARBP1Q13395 1621 aaKnown RBP26.69■■□□□ 1.86
AP3S2-204ENST00000558011 WDR97A6NE52 1622 aa26.62■■□□□ 1.85
AP3S2-204ENST00000558011 ABCA10Q8WWZ4 1543 aa26.62■■□□□ 1.85
AP3S2-204ENST00000558011 ZNF608Q9ULD9 1512 aaPredicted RBP26.55■■□□□ 1.84
AP3S2-204ENST00000558011 TDRD9Q8NDG6 1382 aaKnown RBP26.53■■□□□ 1.84
AP3S2-204ENST00000558011 AQRO60306 1485 aaKnown RBP eCLIP26.48■■□□□ 1.83
AP3S2-204ENST00000558011 KIF27Q86VH2 1401 aa26.48■■□□□ 1.83
AP3S2-204ENST00000558011 ABCA5Q8WWZ7 1642 aa26.47■■□□□ 1.83
AP3S2-204ENST00000558011 EIF4G3O43432 1585 aaKnown RBP26.47■■□□□ 1.83
AP3S2-204ENST00000558011 RUSC2Q8N2Y8 1516 aa26.45■■□□□ 1.83
AP3S2-204ENST00000558011 GAPVD1Q14C86 1478 aa26.44■■□□□ 1.82
AP3S2-204ENST00000558011 PBRM1Q86U86 1689 aa26.37■■□□□ 1.81
AP3S2-204ENST00000558011 EEA1Q15075 1411 aa26.35■■□□□ 1.81
AP3S2-204ENST00000558011 GRIN2BQ13224 1484 aa26.35■■□□□ 1.81
AP3S2-204ENST00000558011 FAM9AQ8IZU1 332 aaPredicted RBP26.34■■□□□ 1.81
AP3S2-204ENST00000558011 ERICH3Q5RHP9 1530 aa26.31■■□□□ 1.8
AP3S2-204ENST00000558011 IGF1RP08069 1367 aa26.31■■□□□ 1.8
AP3S2-204ENST00000558011 CSRNP3Q8WYN3 585 aa26.26■■□□□ 1.79
AP3S2-204ENST00000558011 SNAPC4Q5SXM2 1469 aa26.24■■□□□ 1.79
AP3S2-204ENST00000558011 MAGI1Q96QZ7 1491 aaPredicted RBP26.21■■□□□ 1.79
AP3S2-204ENST00000558011 CUL7Q14999 1698 aa26.19■■□□□ 1.78
AP3S2-204ENST00000558011 ADAMTS12P58397 1594 aa26.17■■□□□ 1.78
AP3S2-204ENST00000558011 CARMIL1Q5VZK9 1371 aa26.16■■□□□ 1.78
AP3S2-204ENST00000558011 FHAD1B1AJZ9 1412 aa26.15■■□□□ 1.78
AP3S2-204ENST00000558011 PRXQ9BXM0 1461 aa26.11■■□□□ 1.77
AP3S2-204ENST00000558011 SYNJ2O15056 1496 aa26.11■■□□□ 1.77
AP3S2-204ENST00000558011 RAPGEF2Q9Y4G8 1499 aa26.07■■□□□ 1.76
AP3S2-204ENST00000558011 CHMP7Q8WUX9 453 aaPredicted RBP26.07■■□□□ 1.76
AP3S2-204ENST00000558011 FBLN2P98095 1184 aa26.06■■□□□ 1.76
AP3S2-204ENST00000558011 KIF21BO75037 1637 aa26.05■■□□□ 1.76
AP3S2-204ENST00000558011 CHD1O14646 1710 aa26.04■■□□□ 1.76
AP3S2-204ENST00000558011 GRIN2AQ12879 1464 aa26.01■■□□□ 1.75
AP3S2-204ENST00000558011 EHMT2Q96KQ7 1210 aa25.97■■□□□ 1.75
AP3S2-204ENST00000558011 GOLGA3Q08378 1498 aa25.94■■□□□ 1.74
AP3S2-204ENST00000558011 CEP170Q5SW79 1584 aa25.87■■□□□ 1.73
AP3S2-204ENST00000558011 LOC105371045A0A1W2PR82 267 aa25.87■■□□□ 1.73
AP3S2-204ENST00000558011 NUP160Q12769 1436 aa25.87■■□□□ 1.73
AP3S2-204ENST00000558011 UBTFP17480 764 aaKnown RBP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms