RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 NLGN2Q8NFZ4 835 aa18.57■□□□□ 0.56
SLIRP-207ENST00000556831 ADRA2BP18089 450 aa18.56■□□□□ 0.56
SLIRP-207ENST00000556831 TRAPPC3LQ5T215 181 aa18.56■□□□□ 0.56
SLIRP-207ENST00000556831 VSIG10Q8N0Z9 540 aa18.56■□□□□ 0.56
SLIRP-207ENST00000556831 ZNF496Q96IT1 587 aaPredicted RBP18.56■□□□□ 0.56
SLIRP-207ENST00000556831 FMNL2Q96PY5 1086 aa18.56■□□□□ 0.56
SLIRP-207ENST00000556831 THUMPD2Q9BTF0 503 aaKnown RBP18.56■□□□□ 0.56
SLIRP-207ENST00000556831 STARD3NLO95772 234 aa18.55■□□□□ 0.56
SLIRP-207ENST00000556831 ARHGEF1Q92888 912 aaKnown RBP18.55■□□□□ 0.56
SLIRP-207ENST00000556831 SRP68Q9UHB9 627 aaKnown RBP18.55■□□□□ 0.56
SLIRP-207ENST00000556831 PRAMEF22A3QJZ6 481 aa18.54■□□□□ 0.56
SLIRP-207ENST00000556831 RPS6KA4O75676 772 aa18.54■□□□□ 0.56
SLIRP-207ENST00000556831 CYP19A1P11511 503 aaPredicted RBP18.54■□□□□ 0.56
SLIRP-207ENST00000556831 RFC4P35249 363 aa18.54■□□□□ 0.56
SLIRP-207ENST00000556831 CCDC184Q52MB2 194 aa18.54■□□□□ 0.56
SLIRP-207ENST00000556831 CCDC146Q8IYE0 955 aa18.54■□□□□ 0.56
SLIRP-207ENST00000556831 RUNDC1Q96C34 613 aa18.54■□□□□ 0.56
SLIRP-207ENST00000556831 TEX13AQ9BXU3 409 aaPredicted RBP18.54■□□□□ 0.56
SLIRP-207ENST00000556831 APLP1P51693 650 aa18.53■□□□□ 0.56
SLIRP-207ENST00000556831 RIPK4P57078 832 aa18.53■□□□□ 0.56
SLIRP-207ENST00000556831 NPM2Q86SE8 214 aaKnown RBP18.53■□□□□ 0.56
SLIRP-207ENST00000556831 PNISRQ8TF01 805 aaKnown RBP18.53■□□□□ 0.56
SLIRP-207ENST00000556831 CCDC87Q9NVE4 849 aa18.53■□□□□ 0.56
SLIRP-207ENST00000556831 MIS18AQ9NYP9 233 aa18.53■□□□□ 0.56
SLIRP-207ENST00000556831 ZBTB1Q9Y2K1 713 aa18.53■□□□□ 0.56
SLIRP-207ENST00000556831 HEG1Q9ULI3 1381 aa18.53■□□□□ 0.56
SLIRP-207ENST00000556831 TAF7Q15545 349 aaPredicted RBP18.52■□□□□ 0.56
SLIRP-207ENST00000556831 ADAMTS8Q9UP79 889 aa18.51■□□□□ 0.55
SLIRP-207ENST00000556831 GYS1P13807 737 aa18.5■□□□□ 0.55
SLIRP-207ENST00000556831 NEUROD2Q15784 382 aa18.5■□□□□ 0.55
SLIRP-207ENST00000556831 GPBP1L1Q9HC44 474 aaPredicted RBP18.5■□□□□ 0.55
SLIRP-207ENST00000556831 RRP7AQ9Y3A4 280 aaKnown RBP18.5■□□□□ 0.55
SLIRP-207ENST00000556831 KDM3BQ7LBC6 1761 aa18.5■□□□□ 0.55
SLIRP-207ENST00000556831 SOS1Q07889 1333 aaPredicted RBP18.49■□□□□ 0.55
SLIRP-207ENST00000556831 TMPOP42166 694 aaKnown RBP18.49■□□□□ 0.55
SLIRP-207ENST00000556831 PIP4K2AP48426 406 aaPredicted RBP18.49■□□□□ 0.55
SLIRP-207ENST00000556831 MRS2Q9HD23 443 aa18.49■□□□□ 0.55
SLIRP-207ENST00000556831 MMP10P09238 476 aa18.48■□□□□ 0.55
SLIRP-207ENST00000556831 WWC3Q9ULE0 1092 aa18.48■□□□□ 0.55
SLIRP-207ENST00000556831 KIAA1551Q9HCM1 1747 aa18.48■□□□□ 0.55
SLIRP-207ENST00000556831 ZPR1O75312 459 aa18.47■□□□□ 0.55
SLIRP-207ENST00000556831 CANXP27824 592 aaKnown RBP18.47■□□□□ 0.55
SLIRP-207ENST00000556831 FKBP8Q14318 412 aa18.47■□□□□ 0.55
SLIRP-207ENST00000556831 NLGN1Q8N2Q7 840 aa18.47■□□□□ 0.55
SLIRP-207ENST00000556831 ZNF330Q9Y3S2 320 aaPredicted RBP18.47■□□□□ 0.55
SLIRP-207ENST00000556831 ATP10DQ9P241 1426 aa18.47■□□□□ 0.55
SLIRP-207ENST00000556831 USP42Q9H9J4 1324 aaKnown RBP18.47■□□□□ 0.55
SLIRP-207ENST00000556831 COL15A1P39059 1388 aa18.46■□□□□ 0.55
SLIRP-207ENST00000556831 A1BGP04217 495 aa18.46■□□□□ 0.55
SLIRP-207ENST00000556831 SNRPA1P09661 255 aaKnown RBP18.46■□□□□ 0.55
SLIRP-207ENST00000556831 USP16Q9Y5T5 823 aa18.46■□□□□ 0.55
SLIRP-207ENST00000556831 A0A087WZG4 1122 aa18.45■□□□□ 0.54
SLIRP-207ENST00000556831 DDR1Q08345 913 aa18.45■□□□□ 0.54
SLIRP-207ENST00000556831 USPL1Q5W0Q7 1092 aa18.45■□□□□ 0.54
SLIRP-207ENST00000556831 DNAJC5GQ8N7S2 189 aa18.45■□□□□ 0.54
SLIRP-207ENST00000556831 BCL2L12Q9HB09 334 aa18.45■□□□□ 0.54
SLIRP-207ENST00000556831 TSPYL4Q9UJ04 414 aa18.45■□□□□ 0.54
SLIRP-207ENST00000556831 N4BP2Q86UW6 1770 aaPredicted RBP18.43■□□□□ 0.54
SLIRP-207ENST00000556831 YBX3P16989 372 aaKnown RBP eCLIP18.43■□□□□ 0.54
SLIRP-207ENST00000556831 KIF13BQ9NQT8 1826 aa18.43■□□□□ 0.54
SLIRP-207ENST00000556831 EIF5P55010 431 aaKnown RBP18.42■□□□□ 0.54
SLIRP-207ENST00000556831 CALD1Q05682 793 aaKnown RBP18.42■□□□□ 0.54
SLIRP-207ENST00000556831 PELP1Q8IZL8 1130 aaKnown RBP18.42■□□□□ 0.54
SLIRP-207ENST00000556831 PARP3Q9Y6F1 533 aa18.42■□□□□ 0.54
SLIRP-207ENST00000556831 LAMB4A4D0S4 1761 aa18.42■□□□□ 0.54
SLIRP-207ENST00000556831 SCN7AQ01118 1682 aa18.41■□□□□ 0.54
SLIRP-207ENST00000556831 GRIN3BO60391 1043 aa18.41■□□□□ 0.54
SLIRP-207ENST00000556831 IL6STP40189 918 aaPredicted RBP18.41■□□□□ 0.54
SLIRP-207ENST00000556831 BABAM1Q9NWV8 329 aa18.41■□□□□ 0.54
SLIRP-207ENST00000556831 TRIM35Q9UPQ4 493 aa18.41■□□□□ 0.54
SLIRP-207ENST00000556831 LAS1LQ9Y4W2 734 aaKnown RBP18.41■□□□□ 0.54
SLIRP-207ENST00000556831 C10orf71Q711Q0 1435 aa18.4■□□□□ 0.54
SLIRP-207ENST00000556831 AFDNP55196 1824 aaKnown RBP18.4■□□□□ 0.54
SLIRP-207ENST00000556831 APAF1O14727 1248 aa18.4■□□□□ 0.54
SLIRP-207ENST00000556831 PXDNLA1KZ92 1463 aa18.39■□□□□ 0.54
SLIRP-207ENST00000556831 NBPF26B4DH59 902 aa18.39■□□□□ 0.53
SLIRP-207ENST00000556831 NBPF10Q6P3W6 841 aaKnown RBP18.39■□□□□ 0.53
SLIRP-207ENST00000556831 NBPF15Q8N660 670 aa18.39■□□□□ 0.53
SLIRP-207ENST00000556831 NARFQ9UHQ1 456 aa18.39■□□□□ 0.53
SLIRP-207ENST00000556831 TBC1D2BQ9UPU7 963 aa18.39■□□□□ 0.53
SLIRP-207ENST00000556831 CD2APQ9Y5K6 639 aa18.39■□□□□ 0.53
SLIRP-207ENST00000556831 BCORQ6W2J9 1755 aa18.38■□□□□ 0.53
SLIRP-207ENST00000556831 TM4SF1P30408 202 aa18.38■□□□□ 0.53
SLIRP-207ENST00000556831 EIF4A1P60842 406 aaKnown RBP18.38■□□□□ 0.53
SLIRP-207ENST00000556831 JMYQ8N9B5 988 aa18.38■□□□□ 0.53
SLIRP-207ENST00000556831 POLRMTO00411 1230 aaKnown RBP18.37■□□□□ 0.53
SLIRP-207ENST00000556831 NFIXQ14938 502 aa18.37■□□□□ 0.53
SLIRP-207ENST00000556831 KRT24Q2M2I5 525 aa18.36■□□□□ 0.53
SLIRP-207ENST00000556831 NRXN2Q9P2S2 1712 aa18.36■□□□□ 0.53
SLIRP-207ENST00000556831 CARMIL3Q8ND23 1372 aa18.35■□□□□ 0.53
SLIRP-207ENST00000556831 BICDL1Q6ZP65 573 aa18.35■□□□□ 0.53
SLIRP-207ENST00000556831 DZIP3Q86Y13 1208 aaKnown RBP18.35■□□□□ 0.53
SLIRP-207ENST00000556831 ZNF652Q9Y2D9 606 aa18.35■□□□□ 0.53
SLIRP-207ENST00000556831 A0A0G2JLW4 131 aa18.34■□□□□ 0.53
SLIRP-207ENST00000556831 CAMTA2O94983 1202 aa18.34■□□□□ 0.53
SLIRP-207ENST00000556831 TBC1D9BQ66K14 1250 aa18.34■□□□□ 0.53
SLIRP-207ENST00000556831 BRCA1P38398 1863 aaKnown RBP18.34■□□□□ 0.53
SLIRP-207ENST00000556831 NPHP1O15259 732 aa18.33■□□□□ 0.52
SLIRP-207ENST00000556831 DPEP1P16444 411 aa18.33■□□□□ 0.52
SLIRP-207ENST00000556831 FAM9BQ8IZU0 186 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms