RNA–Protein interactions for RNA: ENST00000555996.5

LINC01146-203, Transcript of long intergenic non-protein coding RNA 1146, humanhuman

TSL 2 BASIC

Gene LINC01146, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01146-203ENST00000555996 ZNF316A6NFI3 1004 aaPredicted RBP10.21□□□□□ -0.77
LINC01146-203ENST00000555996 PIGBQ92521 554 aa10.21□□□□□ -0.77
LINC01146-203ENST00000555996 KHSRPQ92945 711 aaKnown RBP eCLIP10.21□□□□□ -0.77
LINC01146-203ENST00000555996 MFRPQ9BY79 579 aa10.21□□□□□ -0.77
LINC01146-203ENST00000555996 TAOK2Q9UL54 1235 aa10.21□□□□□ -0.77
LINC01146-203ENST00000555996 CGNL1Q0VF96 1302 aa10.21□□□□□ -0.78
LINC01146-203ENST00000555996 IGSF1Q8N6C5 1336 aa10.21□□□□□ -0.78
LINC01146-203ENST00000555996 PCDH11XQ9BZA7 1347 aa10.21□□□□□ -0.78
LINC01146-203ENST00000555996 PCDH11YQ9BZA8 1340 aa10.21□□□□□ -0.78
LINC01146-203ENST00000555996 PPM1GO15355 546 aaPredicted RBP10.2□□□□□ -0.78
LINC01146-203ENST00000555996 HSPA6P17066 643 aa10.2□□□□□ -0.78
LINC01146-203ENST00000555996 CHD4Q14839 1912 aa10.2□□□□□ -0.78
LINC01146-203ENST00000555996 SMARCC1Q92922 1105 aaPredicted RBP10.2□□□□□ -0.78
LINC01146-203ENST00000555996 SHANK3Q9BYB0 1731 aa10.2□□□□□ -0.78
LINC01146-203ENST00000555996 STK24Q9Y6E0 443 aa10.2□□□□□ -0.78
LINC01146-203ENST00000555996 USP54Q70EL1 1684 aa10.19□□□□□ -0.78
LINC01146-203ENST00000555996 SMG6Q86US8 1419 aaKnown RBP10.19□□□□□ -0.78
LINC01146-203ENST00000555996 RTL1A6NKG5 1358 aa10.19□□□□□ -0.78
LINC01146-203ENST00000555996 TMF1P82094 1093 aa10.19□□□□□ -0.78
LINC01146-203ENST00000555996 EMILIN1Q9Y6C2 1016 aa10.19□□□□□ -0.78
LINC01146-203ENST00000555996 INSRP06213 1382 aa10.18□□□□□ -0.78
LINC01146-203ENST00000555996 KIF3CO14782 793 aa10.18□□□□□ -0.78
LINC01146-203ENST00000555996 HMGB2P26583 209 aaKnown RBP10.18□□□□□ -0.78
LINC01146-203ENST00000555996 LINC00116Q8NCU8 138 aa10.18□□□□□ -0.78
LINC01146-203ENST00000555996 DOT1LQ8TEK3 1739 aa10.18□□□□□ -0.78
LINC01146-203ENST00000555996 FAM208AQ9UK61 1670 aaKnown RBP10.18□□□□□ -0.78
LINC01146-203ENST00000555996 LOC102724428A0A0B4J2F2 783 aa10.17□□□□□ -0.78
LINC01146-203ENST00000555996 GNPATO15228 680 aa10.17□□□□□ -0.78
LINC01146-203ENST00000555996 SLC24A1O60721 1099 aa10.17□□□□□ -0.78
LINC01146-203ENST00000555996 ATP6V1AP38606 617 aa10.17□□□□□ -0.78
LINC01146-203ENST00000555996 SIK1P57059 783 aa10.17□□□□□ -0.78
LINC01146-203ENST00000555996 ITPK1Q13572 414 aa10.17□□□□□ -0.78
LINC01146-203ENST00000555996 ASAP1Q9ULH1 1129 aa10.17□□□□□ -0.78
LINC01146-203ENST00000555996 SPG7Q9UQ90 795 aa10.17□□□□□ -0.78
LINC01146-203ENST00000555996 SSFA2P28290 1259 aa10.16□□□□□ -0.78
LINC01146-203ENST00000555996 CARD14Q9BXL6 1004 aa10.16□□□□□ -0.78
LINC01146-203ENST00000555996 TMOD3Q9NYL9 352 aa10.16□□□□□ -0.78
LINC01146-203ENST00000555996 LY75O60449 1722 aa10.16□□□□□ -0.78
LINC01146-203ENST00000555996 COL24A1Q17RW2 1714 aa10.16□□□□□ -0.78
LINC01146-203ENST00000555996 ADCY9O60503 1353 aa10.15□□□□□ -0.78
LINC01146-203ENST00000555996 FLT4P35916 1363 aa10.15□□□□□ -0.78
LINC01146-203ENST00000555996 TUBGCP6Q96RT7 1819 aa10.15□□□□□ -0.78
LINC01146-203ENST00000555996 A0A0G2JLW4 131 aa10.15□□□□□ -0.78
LINC01146-203ENST00000555996 C2orf72A6NCS6 295 aa10.15□□□□□ -0.78
LINC01146-203ENST00000555996 MMP10P09238 476 aa10.15□□□□□ -0.78
LINC01146-203ENST00000555996 NKX1-1Q15270 411 aaPredicted RBP10.15□□□□□ -0.78
LINC01146-203ENST00000555996 ANKRD13DQ6ZTN6 518 aa10.15□□□□□ -0.78
LINC01146-203ENST00000555996 EYA1Q99502 592 aa10.15□□□□□ -0.78
LINC01146-203ENST00000555996 ATG3Q9NT62 314 aa10.15□□□□□ -0.78
LINC01146-203ENST00000555996 BCS1LQ9Y276 419 aa10.15□□□□□ -0.78
LINC01146-203ENST00000555996 QSER1Q2KHR3 1735 aa10.15□□□□□ -0.78
LINC01146-203ENST00000555996 RGPD2P0DJD1 1756 aa10.14□□□□□ -0.79
LINC01146-203ENST00000555996 STK25O00506 426 aa10.14□□□□□ -0.79
LINC01146-203ENST00000555996 LSM11P83369 360 aaKnown RBP eCLIP10.14□□□□□ -0.79
LINC01146-203ENST00000555996 ARHGAP27Q6ZUM4 889 aa10.14□□□□□ -0.79
LINC01146-203ENST00000555996 PHKG2P15735 406 aa10.13□□□□□ -0.79
LINC01146-203ENST00000555996 TRAPPC3LQ5T215 181 aa10.13□□□□□ -0.79
LINC01146-203ENST00000555996 IFNL2Q8IZJ0 200 aa10.13□□□□□ -0.79
LINC01146-203ENST00000555996 DPEP1P16444 411 aa10.12□□□□□ -0.79
LINC01146-203ENST00000555996 TNNT2P45379 298 aaPredicted RBP10.12□□□□□ -0.79
LINC01146-203ENST00000555996 CDCA8Q53HL2 280 aa10.12□□□□□ -0.79
LINC01146-203ENST00000555996 ARHGEF1Q92888 912 aaKnown RBP10.12□□□□□ -0.79
LINC01146-203ENST00000555996 RTCBQ9Y3I0 505 aaKnown RBP10.12□□□□□ -0.79
LINC01146-203ENST00000555996 WASHC2AQ641Q2 1341 aa10.11□□□□□ -0.79
LINC01146-203ENST00000555996 FCHSD2O94868 740 aa10.11□□□□□ -0.79
LINC01146-203ENST00000555996 TGFB2P61812 414 aa10.11□□□□□ -0.79
LINC01146-203ENST00000555996 NLGN1Q8N2Q7 840 aa10.11□□□□□ -0.79
LINC01146-203ENST00000555996 SLC4A9Q96Q91 983 aa10.11□□□□□ -0.79
LINC01146-203ENST00000555996 POLR3GLQ9BT43 218 aa10.11□□□□□ -0.79
LINC01146-203ENST00000555996 NMRK2Q9NPI5 230 aa10.11□□□□□ -0.79
LINC01146-203ENST00000555996 POLKQ9UBT6 870 aa10.11□□□□□ -0.79
LINC01146-203ENST00000555996 KIF24Q5T7B8 1368 aa10.11□□□□□ -0.79
LINC01146-203ENST00000555996 C4BP0C0L5 1744 aa10.1□□□□□ -0.79
LINC01146-203ENST00000555996 NSD3Q9BZ95 1437 aa10.1□□□□□ -0.79
LINC01146-203ENST00000555996 C5P01031 1676 aa10.1□□□□□ -0.79
LINC01146-203ENST00000555996 TOMM70O94826 608 aa10.1□□□□□ -0.79
LINC01146-203ENST00000555996 SLC34A2O95436 690 aa10.1□□□□□ -0.79
LINC01146-203ENST00000555996 NUDT7P0C024 238 aa10.1□□□□□ -0.79
LINC01146-203ENST00000555996 APLP1P51693 650 aa10.1□□□□□ -0.79
LINC01146-203ENST00000555996 ECM2O94769 699 aaPredicted RBP10.09□□□□□ -0.79
LINC01146-203ENST00000555996 RFC4P35249 363 aa10.09□□□□□ -0.79
LINC01146-203ENST00000555996 PBX2P40425 430 aa10.09□□□□□ -0.79
LINC01146-203ENST00000555996 HTRA3P83110 453 aa10.09□□□□□ -0.79
LINC01146-203ENST00000555996 EIF4A2Q14240 407 aaKnown RBP10.09□□□□□ -0.79
LINC01146-203ENST00000555996 DNAJC5GQ8N7S2 189 aa10.09□□□□□ -0.79
LINC01146-203ENST00000555996 CCDC87Q9NVE4 849 aa10.09□□□□□ -0.79
LINC01146-203ENST00000555996 PARP3Q9Y6F1 533 aa10.09□□□□□ -0.79
LINC01146-203ENST00000555996 RPS6KA4O75676 772 aa10.08□□□□□ -0.8
LINC01146-203ENST00000555996 GYS1P13807 737 aa10.08□□□□□ -0.8
LINC01146-203ENST00000555996 CABP4P57796 275 aa10.08□□□□□ -0.8
LINC01146-203ENST00000555996 C9orf131Q5VYM1 1079 aa10.08□□□□□ -0.8
LINC01146-203ENST00000555996 PCDHGA4Q9Y5G9 962 aa10.08□□□□□ -0.8
LINC01146-203ENST00000555996 PXDNLA1KZ92 1463 aa10.08□□□□□ -0.8
LINC01146-203ENST00000555996 PTCD1O75127 700 aaKnown RBP10.07□□□□□ -0.8
LINC01146-203ENST00000555996 KCNA3P22001 575 aa10.07□□□□□ -0.8
LINC01146-203ENST00000555996 POTEEQ6S8J3 1075 aa10.07□□□□□ -0.8
LINC01146-203ENST00000555996 SRP68Q9UHB9 627 aaKnown RBP10.07□□□□□ -0.8
LINC01146-203ENST00000555996 LHX6Q9UPM6 363 aa10.07□□□□□ -0.8
LINC01146-203ENST00000555996 ERVV-2B6SEH9 535 aa10.06□□□□□ -0.8
LINC01146-203ENST00000555996 PLEKHO1Q53GL0 409 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms