RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 CEBPZQ03701 1054 aaKnown RBP20.54■□□□□ 0.88
PPP4R3A-208ENST00000555462 RUFY3Q7L099 469 aa20.54■□□□□ 0.88
PPP4R3A-208ENST00000555462 SNX14Q9Y5W7 946 aa20.54■□□□□ 0.88
PPP4R3A-208ENST00000555462 DLG5Q8TDM6 1919 aa20.53■□□□□ 0.88
PPP4R3A-208ENST00000555462 A0A087WWV3 80 aa20.53■□□□□ 0.88
PPP4R3A-208ENST00000555462 AP5Z1O43299 807 aa20.53■□□□□ 0.88
PPP4R3A-208ENST00000555462 AIMP1Q12904 312 aaKnown RBP20.53■□□□□ 0.88
PPP4R3A-208ENST00000555462 IBTKQ9P2D0 1353 aaPredicted RBP20.53■□□□□ 0.88
PPP4R3A-208ENST00000555462 IL17REQ8NFR9 667 aa20.53■□□□□ 0.88
PPP4R3A-208ENST00000555462 SYAP1Q96A49 352 aaPredicted RBP20.53■□□□□ 0.88
PPP4R3A-208ENST00000555462 PI4KAP2A4QPH2 592 aa20.53■□□□□ 0.88
PPP4R3A-208ENST00000555462 LMOD2Q6P5Q4 547 aa20.53■□□□□ 0.88
PPP4R3A-208ENST00000555462 PI4KAP1Q8N8J0 262 aa20.53■□□□□ 0.88
PPP4R3A-208ENST00000555462 STX6O43752 255 aa20.52■□□□□ 0.88
PPP4R3A-208ENST00000555462 NOLC1Q14978 699 aaKnown RBP eCLIP20.52■□□□□ 0.88
PPP4R3A-208ENST00000555462 CCDC30Q5VVM6 783 aa20.52■□□□□ 0.88
PPP4R3A-208ENST00000555462 SETD1BQ9UPS6 1966 aaKnown RBP20.52■□□□□ 0.88
PPP4R3A-208ENST00000555462 GNAI3P08754 354 aa20.52■□□□□ 0.88
PPP4R3A-208ENST00000555462 GJB2P29033 226 aa20.52■□□□□ 0.88
PPP4R3A-208ENST00000555462 RHPN1Q8TCX5 695 aa20.52■□□□□ 0.88
PPP4R3A-208ENST00000555462 NEURL4Q96JN8 1562 aa20.52■□□□□ 0.88
PPP4R3A-208ENST00000555462 WDR33Q9C0J8 1336 aaKnown RBP20.52■□□□□ 0.87
PPP4R3A-208ENST00000555462 SASS6Q6UVJ0 657 aa20.51■□□□□ 0.87
PPP4R3A-208ENST00000555462 KLHDC4Q8TBB5 520 aa20.51■□□□□ 0.87
PPP4R3A-208ENST00000555462 LGR6Q9HBX8 967 aa20.51■□□□□ 0.87
PPP4R3A-208ENST00000555462 CHGBP05060 677 aa20.51■□□□□ 0.87
PPP4R3A-208ENST00000555462 HAP1P54257 671 aaPredicted RBP20.51■□□□□ 0.87
PPP4R3A-208ENST00000555462 CUL4AQ13619 759 aa20.51■□□□□ 0.87
PPP4R3A-208ENST00000555462 DRC7Q8IY82 874 aa20.51■□□□□ 0.87
PPP4R3A-208ENST00000555462 CCDC8Q9H0W5 538 aaPredicted RBP20.5■□□□□ 0.87
PPP4R3A-208ENST00000555462 DIAPH3Q9NSV4 1193 aa20.5■□□□□ 0.87
PPP4R3A-208ENST00000555462 CHPF2Q9P2E5 772 aa20.5■□□□□ 0.87
PPP4R3A-208ENST00000555462 PYCARDQ9ULZ3 195 aa20.5■□□□□ 0.87
PPP4R3A-208ENST00000555462 EDC3Q96F86 508 aaKnown RBP20.5■□□□□ 0.87
PPP4R3A-208ENST00000555462 DDX11Q96FC9 970 aa20.5■□□□□ 0.87
PPP4R3A-208ENST00000555462 TAF6LQ9Y6J9 622 aa20.49■□□□□ 0.87
PPP4R3A-208ENST00000555462 ZSCAN22P10073 491 aaPredicted RBP20.49■□□□□ 0.87
PPP4R3A-208ENST00000555462 PIP4K2AP48426 406 aaPredicted RBP20.49■□□□□ 0.87
PPP4R3A-208ENST00000555462 PRAMEF22A3QJZ6 481 aa20.49■□□□□ 0.87
PPP4R3A-208ENST00000555462 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.49■□□□□ 0.87
PPP4R3A-208ENST00000555462 OSBPL3Q9H4L5 887 aa20.48■□□□□ 0.87
PPP4R3A-208ENST00000555462 ROBO2Q9HCK4 1378 aa20.48■□□□□ 0.87
PPP4R3A-208ENST00000555462 CSPP1Q1MSJ5 1256 aa20.48■□□□□ 0.87
PPP4R3A-208ENST00000555462 CWF19L2Q2TBE0 894 aaKnown RBP20.48■□□□□ 0.87
PPP4R3A-208ENST00000555462 LUZP1Q86V48 1076 aa20.48■□□□□ 0.87
PPP4R3A-208ENST00000555462 FAM227BQ96M60 508 aa20.48■□□□□ 0.87
PPP4R3A-208ENST00000555462 CPSF1Q10570 1443 aaKnown RBP20.47■□□□□ 0.87
PPP4R3A-208ENST00000555462 MPRIPQ6WCQ1 1025 aa20.47■□□□□ 0.87
PPP4R3A-208ENST00000555462 NAP1L2Q9ULW6 460 aaPredicted RBP20.47■□□□□ 0.87
PPP4R3A-208ENST00000555462 GNAT3A8MTJ3 354 aa20.47■□□□□ 0.87
PPP4R3A-208ENST00000555462 HSPA4P34932 840 aa20.47■□□□□ 0.87
PPP4R3A-208ENST00000555462 LRMPQ12912 555 aa20.47■□□□□ 0.87
PPP4R3A-208ENST00000555462 NAA30Q147X3 362 aaPredicted RBP20.46■□□□□ 0.87
PPP4R3A-208ENST00000555462 LRRC2Q9BYS8 371 aa20.46■□□□□ 0.87
PPP4R3A-208ENST00000555462 CDK12Q9NYV4 1490 aaPredicted RBP20.46■□□□□ 0.87
PPP4R3A-208ENST00000555462 CCDC183Q5T5S1 534 aa20.46■□□□□ 0.87
PPP4R3A-208ENST00000555462 RPAP1Q9BWH6 1393 aaPredicted RBP20.46■□□□□ 0.87
PPP4R3A-208ENST00000555462 MCM2P49736 904 aa20.46■□□□□ 0.87
PPP4R3A-208ENST00000555462 ZNF592Q92610 1267 aa20.46■□□□□ 0.87
PPP4R3A-208ENST00000555462 NRBP1Q9UHY1 535 aa20.46■□□□□ 0.87
PPP4R3A-208ENST00000555462 CRB1P82279 1406 aa20.45■□□□□ 0.86
PPP4R3A-208ENST00000555462 SALL3Q9BXA9 1300 aa20.45■□□□□ 0.86
PPP4R3A-208ENST00000555462 HS1BP3Q53T59 392 aa20.45■□□□□ 0.86
PPP4R3A-208ENST00000555462 ERCC4Q92889 916 aaPredicted RBP20.45■□□□□ 0.86
PPP4R3A-208ENST00000555462 PDRG1Q9NUG6 133 aa20.45■□□□□ 0.86
PPP4R3A-208ENST00000555462 LIMCH1Q9UPQ0 1083 aa20.45■□□□□ 0.86
PPP4R3A-208ENST00000555462 SGSM2O43147 1006 aa20.45■□□□□ 0.86
PPP4R3A-208ENST00000555462 F13A1P00488 732 aa20.45■□□□□ 0.86
PPP4R3A-208ENST00000555462 LTKP29376 864 aa20.45■□□□□ 0.86
PPP4R3A-208ENST00000555462 BOLA2Q9H3K6 86 aa20.45■□□□□ 0.86
PPP4R3A-208ENST00000555462 RIMS1Q86UR5 1692 aaKnown RBP20.45■□□□□ 0.86
PPP4R3A-208ENST00000555462 ABTB2Q8N961 1025 aa20.44■□□□□ 0.86
PPP4R3A-208ENST00000555462 PI4K2BQ8TCG2 481 aa20.44■□□□□ 0.86
PPP4R3A-208ENST00000555462 LIG1P18858 919 aa20.44■□□□□ 0.86
PPP4R3A-208ENST00000555462 PTGS1P23219 599 aa20.44■□□□□ 0.86
PPP4R3A-208ENST00000555462 PPP4R3BQ5MIZ7 849 aa20.44■□□□□ 0.86
PPP4R3A-208ENST00000555462 LRRC59Q96AG4 307 aaKnown RBP20.44■□□□□ 0.86
PPP4R3A-208ENST00000555462 C9orf78Q9NZ63 289 aaPredicted RBP20.44■□□□□ 0.86
PPP4R3A-208ENST00000555462 PHF14O94880 888 aa20.44■□□□□ 0.86
PPP4R3A-208ENST00000555462 ME3Q16798 604 aa20.43■□□□□ 0.86
PPP4R3A-208ENST00000555462 ZNF710Q8N1W2 664 aa20.43■□□□□ 0.86
PPP4R3A-208ENST00000555462 KIF20BQ96Q89 1820 aa20.43■□□□□ 0.86
PPP4R3A-208ENST00000555462 NPHP1O15259 732 aa20.43■□□□□ 0.86
PPP4R3A-208ENST00000555462 CDC37L1Q7L3B6 337 aa20.43■□□□□ 0.86
PPP4R3A-208ENST00000555462 C16orf45Q96MC5 204 aaPredicted RBP20.43■□□□□ 0.86
PPP4R3A-208ENST00000555462 LARP1BQ659C4 914 aaKnown RBP20.42■□□□□ 0.86
PPP4R3A-208ENST00000555462 AACSQ86V21 672 aa20.42■□□□□ 0.86
PPP4R3A-208ENST00000555462 CNTROBQ8N137 903 aa20.42■□□□□ 0.86
PPP4R3A-208ENST00000555462 LSG1Q9H089 658 aaKnown RBP20.42■□□□□ 0.86
PPP4R3A-208ENST00000555462 TMEM131LA2VDJ0 1609 aa20.42■□□□□ 0.86
PPP4R3A-208ENST00000555462 DYNC1I1O14576 645 aa20.42■□□□□ 0.86
PPP4R3A-208ENST00000555462 PROSER3Q2NL68 480 aa20.42■□□□□ 0.86
PPP4R3A-208ENST00000555462 DIP2CQ9Y2E4 1556 aa20.42■□□□□ 0.86
PPP4R3A-208ENST00000555462 INTS4Q96HW7 963 aaKnown RBP20.42■□□□□ 0.86
PPP4R3A-208ENST00000555462 ATP7BP35670 1465 aa20.42■□□□□ 0.86
PPP4R3A-208ENST00000555462 AATKQ6ZMQ8 1374 aa20.41■□□□□ 0.86
PPP4R3A-208ENST00000555462 GOLGA6L4A6NEF3 574 aa20.41■□□□□ 0.86
PPP4R3A-208ENST00000555462 TLR7Q9NYK1 1049 aaKnown RBP20.41■□□□□ 0.86
PPP4R3A-208ENST00000555462 KIAA0232Q92628 1395 aa20.41■□□□□ 0.86
PPP4R3A-208ENST00000555462 KDM4AO75164 1064 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms