RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 EFCC1Q9HA90 598 aa18.73■□□□□ 0.59
SYNE3-203ENST00000554873 PTPRCP08575 1304 aa18.72■□□□□ 0.59
SYNE3-203ENST00000554873 YY1AP1Q9H869 796 aa18.72■□□□□ 0.59
SYNE3-203ENST00000554873 ZNF397Q8NF99 534 aaPredicted RBP18.72■□□□□ 0.59
SYNE3-203ENST00000554873 PAXBP1Q9Y5B6 917 aa18.72■□□□□ 0.59
SYNE3-203ENST00000554873 KIAA0232Q92628 1395 aa18.72■□□□□ 0.59
SYNE3-203ENST00000554873 SLC4A2P04920 1241 aa18.71■□□□□ 0.59
SYNE3-203ENST00000554873 GADD45BO75293 160 aaPredicted RBP18.7■□□□□ 0.58
SYNE3-203ENST00000554873 REC8O95072 547 aa18.7■□□□□ 0.58
SYNE3-203ENST00000554873 PRR36Q9H6K5 1346 aa18.7■□□□□ 0.58
SYNE3-203ENST00000554873 CCDC112Q8NEF3 446 aa18.7■□□□□ 0.58
SYNE3-203ENST00000554873 MIS18AQ9NYP9 233 aa18.69■□□□□ 0.58
SYNE3-203ENST00000554873 MON2Q7Z3U7 1717 aa18.69■□□□□ 0.58
SYNE3-203ENST00000554873 ERC2O15083 957 aa18.69■□□□□ 0.58
SYNE3-203ENST00000554873 PLCB2Q00722 1185 aa18.69■□□□□ 0.58
SYNE3-203ENST00000554873 KLHL34Q8N239 644 aa18.69■□□□□ 0.58
SYNE3-203ENST00000554873 PPP6R1Q9UPN7 881 aa18.69■□□□□ 0.58
SYNE3-203ENST00000554873 CYP2C19P33261 490 aa18.69■□□□□ 0.58
SYNE3-203ENST00000554873 NAA30Q147X3 362 aaPredicted RBP18.69■□□□□ 0.58
SYNE3-203ENST00000554873 MX1P20591 662 aa18.68■□□□□ 0.58
SYNE3-203ENST00000554873 HNRNPH2P55795 449 aaKnown RBP18.68■□□□□ 0.58
SYNE3-203ENST00000554873 HSP90AB2PQ58FF8 381 aa18.68■□□□□ 0.58
SYNE3-203ENST00000554873 G2E3Q7L622 706 aa18.68■□□□□ 0.58
SYNE3-203ENST00000554873 USP48Q86UV5 1035 aa18.68■□□□□ 0.58
SYNE3-203ENST00000554873 C3P01024 1663 aa18.67■□□□□ 0.58
SYNE3-203ENST00000554873 PDE1AP54750 535 aa18.67■□□□□ 0.58
SYNE3-203ENST00000554873 KMT5BQ4FZB7 885 aa18.67■□□□□ 0.58
SYNE3-203ENST00000554873 OSBPL3Q9H4L5 887 aa18.67■□□□□ 0.58
SYNE3-203ENST00000554873 NRXN3Q9Y4C0 1643 aa18.67■□□□□ 0.58
SYNE3-203ENST00000554873 F6X3S4 739 aa18.67■□□□□ 0.58
SYNE3-203ENST00000554873 SIRT1Q96EB6 747 aa18.67■□□□□ 0.58
SYNE3-203ENST00000554873 TMX3Q96JJ7 454 aa18.67■□□□□ 0.58
SYNE3-203ENST00000554873 HMMRO75330 724 aa18.66■□□□□ 0.58
SYNE3-203ENST00000554873 TNNT1P13805 278 aa18.66■□□□□ 0.58
SYNE3-203ENST00000554873 MLECQ14165 292 aa18.66■□□□□ 0.58
SYNE3-203ENST00000554873 SLC4A10Q6U841 1118 aa18.66■□□□□ 0.58
SYNE3-203ENST00000554873 SPC24Q8NBT2 197 aa18.66■□□□□ 0.58
SYNE3-203ENST00000554873 C16orf45Q96MC5 204 aaPredicted RBP18.66■□□□□ 0.58
SYNE3-203ENST00000554873 TRERF1Q96PN7 1200 aa18.66■□□□□ 0.58
SYNE3-203ENST00000554873 GEMIN8Q9NWZ8 242 aaKnown RBP18.66■□□□□ 0.58
SYNE3-203ENST00000554873 TTC21BQ7Z4L5 1316 aa18.66■□□□□ 0.58
SYNE3-203ENST00000554873 CRB1P82279 1406 aa18.66■□□□□ 0.58
SYNE3-203ENST00000554873 SPATA31D1Q6ZQQ2 1576 aa18.66■□□□□ 0.58
SYNE3-203ENST00000554873 AP5Z1O43299 807 aa18.65■□□□□ 0.58
SYNE3-203ENST00000554873 TNNT3P45378 269 aaPredicted RBP18.65■□□□□ 0.58
SYNE3-203ENST00000554873 MCM2P49736 904 aa18.65■□□□□ 0.58
SYNE3-203ENST00000554873 RAD51AP2Q09MP3 1159 aa18.65■□□□□ 0.58
SYNE3-203ENST00000554873 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.65■□□□□ 0.58
SYNE3-203ENST00000554873 TMEM87AQ8NBN3 555 aa18.65■□□□□ 0.58
SYNE3-203ENST00000554873 GDPD2Q9HCC8 539 aa18.65■□□□□ 0.58
SYNE3-203ENST00000554873 AKAP12Q02952 1782 aa18.64■□□□□ 0.58
SYNE3-203ENST00000554873 CUL4AQ13619 759 aa18.64■□□□□ 0.58
SYNE3-203ENST00000554873 NRKQ7Z2Y5 1582 aa18.64■□□□□ 0.58
SYNE3-203ENST00000554873 NOL10Q9BSC4 688 aaKnown RBP18.64■□□□□ 0.58
SYNE3-203ENST00000554873 MMP14P50281 582 aa18.64■□□□□ 0.57
SYNE3-203ENST00000554873 KIF1BPQ96EK5 621 aa18.64■□□□□ 0.57
SYNE3-203ENST00000554873 FOXO3O43524 673 aa18.64■□□□□ 0.57
SYNE3-203ENST00000554873 NEK4P51957 841 aa18.64■□□□□ 0.57
SYNE3-203ENST00000554873 INTS4Q96HW7 963 aaKnown RBP18.64■□□□□ 0.57
SYNE3-203ENST00000554873 TSHZ3Q63HK5 1081 aa18.63■□□□□ 0.57
SYNE3-203ENST00000554873 FUCA2Q9BTY2 467 aa18.63■□□□□ 0.57
SYNE3-203ENST00000554873 PTGS1P23219 599 aa18.63■□□□□ 0.57
SYNE3-203ENST00000554873 RBM6P78332 1123 aaKnown RBP18.63■□□□□ 0.57
SYNE3-203ENST00000554873 EXOC6BQ9Y2D4 811 aa18.63■□□□□ 0.57
SYNE3-203ENST00000554873 CCT4P50991 539 aaKnown RBP18.62■□□□□ 0.57
SYNE3-203ENST00000554873 SLFNL1Q499Z3 407 aa18.62■□□□□ 0.57
SYNE3-203ENST00000554873 ITSN1Q15811 1721 aa18.61■□□□□ 0.57
SYNE3-203ENST00000554873 ACEP12821 1306 aa18.61■□□□□ 0.57
SYNE3-203ENST00000554873 TSPYL4Q9UJ04 414 aa18.61■□□□□ 0.57
SYNE3-203ENST00000554873 TECPR2O15040 1411 aa18.61■□□□□ 0.57
SYNE3-203ENST00000554873 NUTM2FA1L443 756 aa18.61■□□□□ 0.57
SYNE3-203ENST00000554873 SOX12O15370 315 aa18.61■□□□□ 0.57
SYNE3-203ENST00000554873 ST7Q9NRC1 585 aa18.61■□□□□ 0.57
SYNE3-203ENST00000554873 GNAI2P04899 355 aa18.6■□□□□ 0.57
SYNE3-203ENST00000554873 MTHFSDQ2M296 383 aaKnown RBP18.6■□□□□ 0.57
SYNE3-203ENST00000554873 ESYT1Q9BSJ8 1104 aa18.6■□□□□ 0.57
SYNE3-203ENST00000554873 AGLP35573 1532 aa18.6■□□□□ 0.57
SYNE3-203ENST00000554873 SALL3Q9BXA9 1300 aa18.6■□□□□ 0.57
SYNE3-203ENST00000554873 WDR33Q9C0J8 1336 aaKnown RBP18.6■□□□□ 0.57
SYNE3-203ENST00000554873 FOXD4L6Q3SYB3 417 aaPredicted RBP18.59■□□□□ 0.57
SYNE3-203ENST00000554873 FBXO38Q6PIJ6 1188 aa18.59■□□□□ 0.57
SYNE3-203ENST00000554873 FOXD4L3Q6VB84 417 aaPredicted RBP18.59■□□□□ 0.57
SYNE3-203ENST00000554873 ZBTB9Q96C00 473 aa18.59■□□□□ 0.57
SYNE3-203ENST00000554873 RASSF4Q9H2L5 321 aa18.59■□□□□ 0.57
SYNE3-203ENST00000554873 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.59■□□□□ 0.57
SYNE3-203ENST00000554873 RSPH14Q9UHP6 348 aa18.59■□□□□ 0.57
SYNE3-203ENST00000554873 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.59■□□□□ 0.57
SYNE3-203ENST00000554873 MAP3K19Q56UN5 1328 aa18.59■□□□□ 0.57
SYNE3-203ENST00000554873 OVOS2A0A0J9YW53 1432 aa18.59■□□□□ 0.57
SYNE3-203ENST00000554873 OVOS2Q6IE36 1432 aa18.59■□□□□ 0.57
SYNE3-203ENST00000554873 FAM69CQ0P6D2 419 aa18.59■□□□□ 0.57
SYNE3-203ENST00000554873 BRD2P25440 801 aaKnown RBP18.59■□□□□ 0.57
SYNE3-203ENST00000554873 UBE2HP62256 183 aa18.59■□□□□ 0.57
SYNE3-203ENST00000554873 PALD1Q9ULE6 856 aa18.59■□□□□ 0.57
SYNE3-203ENST00000554873 ROBO2Q9HCK4 1378 aa18.58■□□□□ 0.57
SYNE3-203ENST00000554873 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.58■□□□□ 0.57
SYNE3-203ENST00000554873 RTF1Q92541 710 aaKnown RBP18.58■□□□□ 0.57
SYNE3-203ENST00000554873 RNF216Q9NWF9 866 aaPredicted RBP18.58■□□□□ 0.57
SYNE3-203ENST00000554873 PEAK1Q9H792 1746 aa18.58■□□□□ 0.56
SYNE3-203ENST00000554873 NOP2P46087 812 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms