RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 CCNB3Q8WWL7 1395 aa6.95□□□□□ -1.3
PPP4R3A-204ENST00000554574 ITGBL1O95965 494 aaPredicted RBP6.94□□□□□ -1.3
PPP4R3A-204ENST00000554574 ARHGAP4P98171 946 aa6.94□□□□□ -1.3
PPP4R3A-204ENST00000554574 NAA30Q147X3 362 aaPredicted RBP6.94□□□□□ -1.3
PPP4R3A-204ENST00000554574 TNS4Q8IZW8 715 aa6.94□□□□□ -1.3
PPP4R3A-204ENST00000554574 EHBP1Q8NDI1 1231 aa6.94□□□□□ -1.3
PPP4R3A-204ENST00000554574 GIPC2Q8TF65 315 aa6.94□□□□□ -1.3
PPP4R3A-204ENST00000554574 TLL2Q9Y6L7 1015 aa6.94□□□□□ -1.3
PPP4R3A-204ENST00000554574 PTCD1O75127 700 aaKnown RBP6.93□□□□□ -1.3
PPP4R3A-204ENST00000554574 IGFBP4P22692 258 aa6.93□□□□□ -1.3
PPP4R3A-204ENST00000554574 GRM5P41594 1212 aa6.93□□□□□ -1.3
PPP4R3A-204ENST00000554574 FKBP4Q02790 459 aaKnown RBP eCLIP6.93□□□□□ -1.3
PPP4R3A-204ENST00000554574 MRRFQ96E11 262 aaKnown RBP6.93□□□□□ -1.3
PPP4R3A-204ENST00000554574 CDK15Q96Q40 435 aa6.93□□□□□ -1.3
PPP4R3A-204ENST00000554574 ETNK1Q9HBU6 452 aa6.93□□□□□ -1.3
PPP4R3A-204ENST00000554574 EPRSP07814 1512 aaKnown RBP6.93□□□□□ -1.3
PPP4R3A-204ENST00000554574 MAPK1P28482 360 aa6.93□□□□□ -1.3
PPP4R3A-204ENST00000554574 EPHA4P54764 986 aa6.93□□□□□ -1.3
PPP4R3A-204ENST00000554574 SF3B2Q13435 895 aaKnown RBP6.93□□□□□ -1.3
PPP4R3A-204ENST00000554574 RC3H1Q5TC82 1133 aaKnown RBP6.93□□□□□ -1.3
PPP4R3A-204ENST00000554574 ZNF784Q8NCA9 323 aaPredicted RBP6.93□□□□□ -1.3
PPP4R3A-204ENST00000554574 SCG3Q8WXD2 468 aaKnown RBP6.93□□□□□ -1.3
PPP4R3A-204ENST00000554574 ESF1Q9H501 851 aaKnown RBP6.93□□□□□ -1.3
PPP4R3A-204ENST00000554574 SERTAD1Q9UHV2 236 aa6.93□□□□□ -1.3
PPP4R3A-204ENST00000554574 PHLDB1Q86UU1 1377 aa6.93□□□□□ -1.3
PPP4R3A-204ENST00000554574 CARMIL2Q6F5E8 1435 aa6.93□□□□□ -1.3
PPP4R3A-204ENST00000554574 SHROOM2Q13796 1616 aa6.93□□□□□ -1.3
PPP4R3A-204ENST00000554574 MTUS2Q5JR59 1369 aa6.92□□□□□ -1.3
PPP4R3A-204ENST00000554574 WASLO00401 505 aaPredicted RBP6.92□□□□□ -1.3
PPP4R3A-204ENST00000554574 FOXO3O43524 673 aa6.92□□□□□ -1.3
PPP4R3A-204ENST00000554574 IGSF3O75054 1194 aa6.92□□□□□ -1.3
PPP4R3A-204ENST00000554574 COL26A1Q96A83 441 aa6.92□□□□□ -1.3
PPP4R3A-204ENST00000554574 TSPAN10Q9H1Z9 355 aaPredicted RBP6.92□□□□□ -1.3
PPP4R3A-204ENST00000554574 IGSF5Q9NSI5 407 aa6.92□□□□□ -1.3
PPP4R3A-204ENST00000554574 ARHGEF11O15085 1522 aa6.92□□□□□ -1.3
PPP4R3A-204ENST00000554574 MAGI3Q5TCQ9 1506 aa6.92□□□□□ -1.3
PPP4R3A-204ENST00000554574 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.92□□□□□ -1.3
PPP4R3A-204ENST00000554574 LILRA1O75019 489 aa6.91□□□□□ -1.3
PPP4R3A-204ENST00000554574 INHAP05111 366 aa6.91□□□□□ -1.3
PPP4R3A-204ENST00000554574 GGCXP38435 758 aa6.91□□□□□ -1.3
PPP4R3A-204ENST00000554574 RPIAP49247 311 aa6.91□□□□□ -1.3
PPP4R3A-204ENST00000554574 HELQQ8TDG4 1101 aa6.91□□□□□ -1.3
PPP4R3A-204ENST00000554574 DCTN4Q9UJW0 460 aa6.91□□□□□ -1.3
PPP4R3A-204ENST00000554574 BACH1O14867 736 aa6.91□□□□□ -1.3
PPP4R3A-204ENST00000554574 TAGLNQ01995 201 aaKnown RBP6.91□□□□□ -1.3
PPP4R3A-204ENST00000554574 PPP1R18Q6NYC8 613 aa6.91□□□□□ -1.3
PPP4R3A-204ENST00000554574 ASB16Q96NS5 453 aa6.91□□□□□ -1.3
PPP4R3A-204ENST00000554574 NUP153P49790 1475 aaKnown RBP6.9□□□□□ -1.3
PPP4R3A-204ENST00000554574 ATAD2Q6PL18 1390 aa6.9□□□□□ -1.3
PPP4R3A-204ENST00000554574 DHX9Q08211 1270 aaKnown RBP6.9□□□□□ -1.3
PPP4R3A-204ENST00000554574 FBXO33Q7Z6M2 555 aa6.9□□□□□ -1.3
PPP4R3A-204ENST00000554574 CDK13Q14004 1512 aaKnown RBP6.9□□□□□ -1.3
PPP4R3A-204ENST00000554574 NCOA2Q15596 1464 aa6.9□□□□□ -1.31
PPP4R3A-204ENST00000554574 SIAH2O43255 324 aa6.89□□□□□ -1.31
PPP4R3A-204ENST00000554574 PPP1R26Q5T8A7 1209 aaPredicted RBP6.89□□□□□ -1.31
PPP4R3A-204ENST00000554574 CCDC116Q8IYX3 515 aa6.89□□□□□ -1.31
PPP4R3A-204ENST00000554574 SAP130Q9H0E3 1048 aa6.89□□□□□ -1.31
PPP4R3A-204ENST00000554574 FGD6Q6ZV73 1430 aa6.89□□□□□ -1.31
PPP4R3A-204ENST00000554574 ABCA8O94911 1581 aa6.89□□□□□ -1.31
PPP4R3A-204ENST00000554574 A0A1W2PRU2 124 aa6.89□□□□□ -1.31
PPP4R3A-204ENST00000554574 ADH1CP00326 375 aa6.89□□□□□ -1.31
PPP4R3A-204ENST00000554574 TBCELQ5QJ74 424 aa6.89□□□□□ -1.31
PPP4R3A-204ENST00000554574 LIAT1Q6ZQX7 453 aa6.89□□□□□ -1.31
PPP4R3A-204ENST00000554574 EMID1Q96A84 441 aaPredicted RBP6.89□□□□□ -1.31
PPP4R3A-204ENST00000554574 SLC4A9Q96Q91 983 aa6.89□□□□□ -1.31
PPP4R3A-204ENST00000554574 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.89□□□□□ -1.31
PPP4R3A-204ENST00000554574 RAB6BQ9NRW1 208 aa6.89□□□□□ -1.31
PPP4R3A-204ENST00000554574 MYOM3Q5VTT5 1437 aa6.89□□□□□ -1.31
PPP4R3A-204ENST00000554574 ADCY10Q96PN6 1610 aa6.89□□□□□ -1.31
PPP4R3A-204ENST00000554574 NR3C2P08235 984 aa6.88□□□□□ -1.31
PPP4R3A-204ENST00000554574 NPR3P17342 541 aa6.88□□□□□ -1.31
PPP4R3A-204ENST00000554574 MPSTP25325 297 aa6.88□□□□□ -1.31
PPP4R3A-204ENST00000554574 ADD1P35611 737 aaKnown RBP6.88□□□□□ -1.31
PPP4R3A-204ENST00000554574 FOXK2Q01167 660 aa6.88□□□□□ -1.31
PPP4R3A-204ENST00000554574 MYT1Q01538 1121 aa6.88□□□□□ -1.31
PPP4R3A-204ENST00000554574 CYP2U1Q7Z449 544 aa6.88□□□□□ -1.31
PPP4R3A-204ENST00000554574 MPNDQ8N594 471 aa6.88□□□□□ -1.31
PPP4R3A-204ENST00000554574 RNF166Q96A37 237 aaPredicted RBP6.88□□□□□ -1.31
PPP4R3A-204ENST00000554574 CLASP1Q7Z460 1538 aa6.88□□□□□ -1.31
PPP4R3A-204ENST00000554574 PTPN23Q9H3S7 1636 aa6.88□□□□□ -1.31
PPP4R3A-204ENST00000554574 PPP1R12BO60237 982 aaPredicted RBP6.88□□□□□ -1.31
PPP4R3A-204ENST00000554574 CD2BP2O95400 341 aaKnown RBP6.88□□□□□ -1.31
PPP4R3A-204ENST00000554574 SCHIP1Q9P0W5 487 aaPredicted RBP6.88□□□□□ -1.31
PPP4R3A-204ENST00000554574 HCSTQ9UBK5 93 aa6.88□□□□□ -1.31
PPP4R3A-204ENST00000554574 PLB1Q6P1J6 1458 aa6.87□□□□□ -1.31
PPP4R3A-204ENST00000554574 GNRH1P01148 92 aa6.87□□□□□ -1.31
PPP4R3A-204ENST00000554574 SLC9A9Q8IVB4 645 aa6.87□□□□□ -1.31
PPP4R3A-204ENST00000554574 ZSCAN29Q8IWY8 852 aaPredicted RBP6.87□□□□□ -1.31
PPP4R3A-204ENST00000554574 RGL4Q8IZJ4 473 aa6.87□□□□□ -1.31
PPP4R3A-204ENST00000554574 VTI1AQ96AJ9 217 aa6.87□□□□□ -1.31
PPP4R3A-204ENST00000554574 ARHGEF10LQ9HCE6 1279 aa6.87□□□□□ -1.31
PPP4R3A-204ENST00000554574 ITSN2Q9NZM3 1697 aa6.87□□□□□ -1.31
PPP4R3A-204ENST00000554574 PRG4Q92954 1404 aaPredicted RBP6.86□□□□□ -1.31
PPP4R3A-204ENST00000554574 FAM13AO94988 1023 aa6.86□□□□□ -1.31
PPP4R3A-204ENST00000554574 NR5A1Q13285 461 aa6.86□□□□□ -1.31
PPP4R3A-204ENST00000554574 ZNF326Q5BKZ1 582 aaKnown RBP6.86□□□□□ -1.31
PPP4R3A-204ENST00000554574 C16orf46Q6P387 395 aa6.86□□□□□ -1.31
PPP4R3A-204ENST00000554574 C2orf49Q9BVC5 232 aaPredicted RBP6.86□□□□□ -1.31
PPP4R3A-204ENST00000554574 USP3Q9Y6I4 520 aa6.86□□□□□ -1.31
PPP4R3A-204ENST00000554574 A6NJY4 79 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms