RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.43□□□□□ -1.06
SMARCC2-213ENST00000552627 CNTLNQ9NXG0 1405 aa8.43□□□□□ -1.06
SMARCC2-213ENST00000552627 ZC3H13Q5T200 1668 aaKnown RBP8.43□□□□□ -1.06
SMARCC2-213ENST00000552627 DHX9Q08211 1270 aaKnown RBP8.42□□□□□ -1.06
SMARCC2-213ENST00000552627 SENP2Q9HC62 589 aa8.42□□□□□ -1.06
SMARCC2-213ENST00000552627 ZNF330Q9Y3S2 320 aaPredicted RBP8.42□□□□□ -1.06
SMARCC2-213ENST00000552627 ZMYM3Q14202 1370 aa8.42□□□□□ -1.06
SMARCC2-213ENST00000552627 LMTK3Q96Q04 1460 aa8.42□□□□□ -1.06
SMARCC2-213ENST00000552627 GCC2Q8IWJ2 1684 aa8.42□□□□□ -1.06
SMARCC2-213ENST00000552627 MYO3AQ8NEV4 1616 aa8.41□□□□□ -1.06
SMARCC2-213ENST00000552627 ANKRD50Q9ULJ7 1429 aa8.41□□□□□ -1.06
SMARCC2-213ENST00000552627 ROCK1Q13464 1354 aa8.41□□□□□ -1.06
SMARCC2-213ENST00000552627 WASHC2CQ9Y4E1 1318 aa8.41□□□□□ -1.06
SMARCC2-213ENST00000552627 C11orf95C9JLR9 678 aaPredicted RBP8.41□□□□□ -1.06
SMARCC2-213ENST00000552627 BMP1P13497 986 aa8.41□□□□□ -1.06
SMARCC2-213ENST00000552627 MCCD1P59942 119 aaPredicted RBP8.41□□□□□ -1.06
SMARCC2-213ENST00000552627 INTS6LQ5JSJ4 861 aaKnown RBP8.41□□□□□ -1.06
SMARCC2-213ENST00000552627 PPP1R26Q5T8A7 1209 aaPredicted RBP8.41□□□□□ -1.06
SMARCC2-213ENST00000552627 GDPD2Q9HCC8 539 aa8.41□□□□□ -1.06
SMARCC2-213ENST00000552627 PGPEP1Q9NXJ5 209 aa8.41□□□□□ -1.06
SMARCC2-213ENST00000552627 UNC13BO14795 1591 aa8.4□□□□□ -1.06
SMARCC2-213ENST00000552627 TRIM46Q7Z4K8 759 aa8.4□□□□□ -1.06
SMARCC2-213ENST00000552627 ZNF592Q92610 1267 aa8.4□□□□□ -1.06
SMARCC2-213ENST00000552627 CFAP65Q6ZU64 1925 aaKnown RBP8.4□□□□□ -1.06
SMARCC2-213ENST00000552627 VWDEQ8N2E2 1590 aa8.39□□□□□ -1.07
SMARCC2-213ENST00000552627 FAM135AQ9P2D6 1515 aa8.39□□□□□ -1.07
SMARCC2-213ENST00000552627 ABL2P42684 1182 aa8.39□□□□□ -1.07
SMARCC2-213ENST00000552627 HSPA2P54652 639 aa8.39□□□□□ -1.07
SMARCC2-213ENST00000552627 RAB15P59190 212 aa8.39□□□□□ -1.07
SMARCC2-213ENST00000552627 FLIIQ13045 1269 aa8.39□□□□□ -1.07
SMARCC2-213ENST00000552627 KIFC2Q96AC6 838 aa8.39□□□□□ -1.07
SMARCC2-213ENST00000552627 PZPP20742 1482 aa8.38□□□□□ -1.07
SMARCC2-213ENST00000552627 ESPNB1AK53 854 aa8.38□□□□□ -1.07
SMARCC2-213ENST00000552627 IRF5Q13568 498 aa8.38□□□□□ -1.07
SMARCC2-213ENST00000552627 SCARF1Q14162 830 aa8.38□□□□□ -1.07
SMARCC2-213ENST00000552627 MRPL14Q6P1L8 145 aaKnown RBP8.38□□□□□ -1.07
SMARCC2-213ENST00000552627 SEPT12Q8IYM1 358 aa8.38□□□□□ -1.07
SMARCC2-213ENST00000552627 TRIM47Q96LD4 638 aa8.38□□□□□ -1.07
SMARCC2-213ENST00000552627 NAIPQ13075 1403 aa8.37□□□□□ -1.07
SMARCC2-213ENST00000552627 ZNF142P52746 1687 aaPredicted RBP8.37□□□□□ -1.07
SMARCC2-213ENST00000552627 GIGYF1O75420 1035 aaPredicted RBP8.37□□□□□ -1.07
SMARCC2-213ENST00000552627 EFCAB6Q5THR3 1501 aa8.37□□□□□ -1.07
SMARCC2-213ENST00000552627 NPATQ14207 1427 aa8.37□□□□□ -1.07
SMARCC2-213ENST00000552627 UHRF1BP1Q6BDS2 1440 aa8.37□□□□□ -1.07
SMARCC2-213ENST00000552627 KANK1Q14678 1352 aa8.36□□□□□ -1.07
SMARCC2-213ENST00000552627 IQGAP3Q86VI3 1631 aa8.36□□□□□ -1.07
SMARCC2-213ENST00000552627 CEP170BQ9Y4F5 1589 aaPredicted RBP8.36□□□□□ -1.07
SMARCC2-213ENST00000552627 LMTK2Q8IWU2 1503 aa8.36□□□□□ -1.07
SMARCC2-213ENST00000552627 ERVH48-1M5A8F1 160 aa8.36□□□□□ -1.07
SMARCC2-213ENST00000552627 UPP2O95045 317 aa8.36□□□□□ -1.07
SMARCC2-213ENST00000552627 SNRPBP14678 240 aaKnown RBP8.36□□□□□ -1.07
SMARCC2-213ENST00000552627 MEIOBQ8N635 442 aa8.36□□□□□ -1.07
SMARCC2-213ENST00000552627 ZFP42Q96MM3 310 aa8.36□□□□□ -1.07
SMARCC2-213ENST00000552627 PURBQ96QR8 312 aaKnown RBP8.36□□□□□ -1.07
SMARCC2-213ENST00000552627 ERVK-7P63135 1459 aa8.36□□□□□ -1.07
SMARCC2-213ENST00000552627 E9PCH4 1651 aa8.36□□□□□ -1.07
SMARCC2-213ENST00000552627 TET3O43151 1660 aa8.36□□□□□ -1.07
SMARCC2-213ENST00000552627 SPATA31D1Q6ZQQ2 1576 aa8.35□□□□□ -1.07
SMARCC2-213ENST00000552627 EIF4G2P78344 907 aaKnown RBP eCLIP8.35□□□□□ -1.07
SMARCC2-213ENST00000552627 CBLBQ13191 982 aa8.35□□□□□ -1.07
SMARCC2-213ENST00000552627 RNF20Q5VTR2 975 aa8.35□□□□□ -1.07
SMARCC2-213ENST00000552627 TMPRSS4Q9NRS4 437 aa8.35□□□□□ -1.07
SMARCC2-213ENST00000552627 COG6Q9Y2V7 657 aa8.35□□□□□ -1.07
SMARCC2-213ENST00000552627 HFM1A2PYH4 1435 aa8.35□□□□□ -1.07
SMARCC2-213ENST00000552627 SYNMO15061 1565 aa8.35□□□□□ -1.07
SMARCC2-213ENST00000552627 TNRQ92752 1358 aa8.35□□□□□ -1.07
SMARCC2-213ENST00000552627 SETD1BQ9UPS6 1966 aaKnown RBP8.34□□□□□ -1.07
SMARCC2-213ENST00000552627 RAD21O60216 631 aa8.34□□□□□ -1.07
SMARCC2-213ENST00000552627 VAC14Q08AM6 782 aa8.34□□□□□ -1.07
SMARCC2-213ENST00000552627 WASHC4Q2M389 1173 aa8.34□□□□□ -1.07
SMARCC2-213ENST00000552627 C6orf118Q5T5N4 469 aa8.34□□□□□ -1.07
SMARCC2-213ENST00000552627 Q6ZVU0 165 aa8.34□□□□□ -1.07
SMARCC2-213ENST00000552627 CCDC125Q86Z20 511 aa8.34□□□□□ -1.07
SMARCC2-213ENST00000552627 LINC00528Q8N1L1 170 aa8.34□□□□□ -1.07
SMARCC2-213ENST00000552627 TRIM52Q96A61 297 aa8.34□□□□□ -1.07
SMARCC2-213ENST00000552627 TSEN34Q9BSV6 310 aaKnown RBP8.34□□□□□ -1.07
SMARCC2-213ENST00000552627 STRCQ7RTU9 1775 aa8.34□□□□□ -1.07
SMARCC2-213ENST00000552627 BMP2P12643 396 aa8.33□□□□□ -1.08
SMARCC2-213ENST00000552627 ZNF784Q8NCA9 323 aaPredicted RBP8.33□□□□□ -1.08
SMARCC2-213ENST00000552627 NUP155O75694 1391 aa8.33□□□□□ -1.08
SMARCC2-213ENST00000552627 PIK3C2BO00750 1634 aa8.32□□□□□ -1.08
SMARCC2-213ENST00000552627 UGGT1Q9NYU2 1555 aa8.32□□□□□ -1.08
SMARCC2-213ENST00000552627 ARHGAP31Q2M1Z3 1444 aa8.32□□□□□ -1.08
SMARCC2-213ENST00000552627 WWC1Q8IX03 1113 aa8.32□□□□□ -1.08
SMARCC2-213ENST00000552627 POM121Q96HA1 1249 aa8.32□□□□□ -1.08
SMARCC2-213ENST00000552627 CEP126Q9P2H0 1117 aa8.32□□□□□ -1.08
SMARCC2-213ENST00000552627 A2ML1A8K2U0 1454 aa8.32□□□□□ -1.08
SMARCC2-213ENST00000552627 UBR1Q8IWV7 1749 aa8.32□□□□□ -1.08
SMARCC2-213ENST00000552627 ZNF775Q96BV0 537 aaPredicted RBP8.31□□□□□ -1.08
SMARCC2-213ENST00000552627 POLR1AO95602 1720 aaPredicted RBP8.3□□□□□ -1.08
SMARCC2-213ENST00000552627 SPHKAPQ2M3C7 1700 aa8.3□□□□□ -1.08
SMARCC2-213ENST00000552627 LILRA1O75019 489 aa8.3□□□□□ -1.08
SMARCC2-213ENST00000552627 CYLDQ9NQC7 956 aa8.3□□□□□ -1.08
SMARCC2-213ENST00000552627 MYO5BQ9ULV0 1848 aa8.3□□□□□ -1.08
SMARCC2-213ENST00000552627 NLRP1Q9C000 1473 aa8.3□□□□□ -1.08
SMARCC2-213ENST00000552627 NOS1P29475 1434 aa8.29□□□□□ -1.08
SMARCC2-213ENST00000552627 ADD1P35611 737 aaKnown RBP8.29□□□□□ -1.08
SMARCC2-213ENST00000552627 AGBL1Q96MI9 1066 aa8.29□□□□□ -1.08
SMARCC2-213ENST00000552627 PCDHB11Q9Y5F2 797 aa8.29□□□□□ -1.08
SMARCC2-213ENST00000552627 SETD5Q9C0A6 1442 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms