RNA–Protein interactions for RNA: ENST00000552254.5

CDK4-211, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-211ENST00000552254 ADAMTS8Q9UP79 889 aa12.13□□□□□ -0.47
CDK4-211ENST00000552254 BCS1LQ9Y276 419 aa12.13□□□□□ -0.47
CDK4-211ENST00000552254 ZNF831Q5JPB2 1677 aa12.13□□□□□ -0.47
CDK4-211ENST00000552254 MYH14Q7Z406 1995 aaKnown RBP12.12□□□□□ -0.47
CDK4-211ENST00000552254 MLLT1Q03111 559 aaPredicted RBP12.12□□□□□ -0.47
CDK4-211ENST00000552254 FSTL1Q12841 308 aa12.12□□□□□ -0.47
CDK4-211ENST00000552254 ARHGAP27Q6ZUM4 889 aa12.12□□□□□ -0.47
CDK4-211ENST00000552254 SLC52A2Q9HAB3 445 aa12.12□□□□□ -0.47
CDK4-211ENST00000552254 N4BP2Q86UW6 1770 aaPredicted RBP12.12□□□□□ -0.47
CDK4-211ENST00000552254 MAPK8IP3Q9UPT6 1336 aa12.11□□□□□ -0.47
CDK4-211ENST00000552254 UBR2Q8IWV8 1755 aa12.11□□□□□ -0.47
CDK4-211ENST00000552254 CEMIPQ8WUJ3 1361 aa12.11□□□□□ -0.47
CDK4-211ENST00000552254 HTATSF1O43719 755 aaKnown RBP12.11□□□□□ -0.47
CDK4-211ENST00000552254 SSFA2P28290 1259 aa12.11□□□□□ -0.47
CDK4-211ENST00000552254 NFE2L2Q16236 605 aa12.11□□□□□ -0.47
CDK4-211ENST00000552254 TJP1Q07157 1748 aa12.11□□□□□ -0.47
CDK4-211ENST00000552254 KDM2BQ8NHM5 1336 aa12.11□□□□□ -0.47
CDK4-211ENST00000552254 CCDC146Q8IYE0 955 aa12.1□□□□□ -0.47
CDK4-211ENST00000552254 RUNDC1Q96C34 613 aa12.1□□□□□ -0.47
CDK4-211ENST00000552254 MRS2Q9HD23 443 aa12.1□□□□□ -0.47
CDK4-211ENST00000552254 C4AP0C0L4 1744 aa12.1□□□□□ -0.47
CDK4-211ENST00000552254 TNRC6CQ9HCJ0 1690 aaKnown RBP12.1□□□□□ -0.47
CDK4-211ENST00000552254 TEFQ10587 303 aa12.09□□□□□ -0.47
CDK4-211ENST00000552254 SLC39A6Q13433 755 aa12.09□□□□□ -0.47
CDK4-211ENST00000552254 DCTN1Q14203 1278 aa12.09□□□□□ -0.47
CDK4-211ENST00000552254 MCM10Q7L590 875 aa12.09□□□□□ -0.47
CDK4-211ENST00000552254 PNISRQ8TF01 805 aaKnown RBP12.09□□□□□ -0.47
CDK4-211ENST00000552254 RTF1Q92541 710 aaKnown RBP12.09□□□□□ -0.47
CDK4-211ENST00000552254 RTCBQ9Y3I0 505 aaKnown RBP12.09□□□□□ -0.47
CDK4-211ENST00000552254 TMPOP42166 694 aaKnown RBP12.08□□□□□ -0.48
CDK4-211ENST00000552254 TRAPPC3LQ5T215 181 aa12.08□□□□□ -0.48
CDK4-211ENST00000552254 ARHGEF1Q92888 912 aaKnown RBP12.08□□□□□ -0.48
CDK4-211ENST00000552254 PXDNLA1KZ92 1463 aa12.08□□□□□ -0.48
CDK4-211ENST00000552254 KCPQ6ZWJ8 1503 aa12.07□□□□□ -0.48
CDK4-211ENST00000552254 RIPK4P57078 832 aa12.07□□□□□ -0.48
CDK4-211ENST00000552254 SMC1BQ8NDV3 1235 aa12.07□□□□□ -0.48
CDK4-211ENST00000552254 CNTNAP4Q9C0A0 1308 aa12.07□□□□□ -0.48
CDK4-211ENST00000552254 KDM3BQ7LBC6 1761 aa12.06□□□□□ -0.48
CDK4-211ENST00000552254 RPS6KA4O75676 772 aa12.06□□□□□ -0.48
CDK4-211ENST00000552254 MMP10P09238 476 aa12.06□□□□□ -0.48
CDK4-211ENST00000552254 CRKLP46109 303 aaKnown RBP12.06□□□□□ -0.48
CDK4-211ENST00000552254 RC3H1Q5TC82 1133 aaKnown RBP12.06□□□□□ -0.48
CDK4-211ENST00000552254 C9orf131Q5VYM1 1079 aa12.06□□□□□ -0.48
CDK4-211ENST00000552254 DNAJC10Q8IXB1 793 aa12.06□□□□□ -0.48
CDK4-211ENST00000552254 RRP7AQ9Y3A4 280 aaKnown RBP12.06□□□□□ -0.48
CDK4-211ENST00000552254 KIF13BQ9NQT8 1826 aa12.06□□□□□ -0.48
CDK4-211ENST00000552254 RFC4P35249 363 aa12.05□□□□□ -0.48
CDK4-211ENST00000552254 DIEXFQ68CQ4 756 aaKnown RBP12.05□□□□□ -0.48
CDK4-211ENST00000552254 SRP68Q9UHB9 627 aaKnown RBP12.05□□□□□ -0.48
CDK4-211ENST00000552254 CUL9Q8IWT3 2517 aa12.05□□□□□ -0.48
CDK4-211ENST00000552254 KIAA1551Q9HCM1 1747 aa12.04□□□□□ -0.48
CDK4-211ENST00000552254 A0A0G2JLW4 131 aa12.04□□□□□ -0.48
CDK4-211ENST00000552254 BTBD11A6QL63 1104 aa12.04□□□□□ -0.48
CDK4-211ENST00000552254 APAF1O14727 1248 aa12.04□□□□□ -0.48
CDK4-211ENST00000552254 GYS1P13807 737 aa12.04□□□□□ -0.48
CDK4-211ENST00000552254 TAF7Q15545 349 aaPredicted RBP12.04□□□□□ -0.48
CDK4-211ENST00000552254 NEUROD2Q15784 382 aa12.04□□□□□ -0.48
CDK4-211ENST00000552254 ZNF790Q6PG37 636 aa12.04□□□□□ -0.48
CDK4-211ENST00000552254 THUMPD2Q9BTF0 503 aaKnown RBP12.04□□□□□ -0.48
CDK4-211ENST00000552254 RRAGCQ9HB90 399 aa12.04□□□□□ -0.48
CDK4-211ENST00000552254 RNF181Q9P0P0 153 aa12.04□□□□□ -0.48
CDK4-211ENST00000552254 ARFGEF1Q9Y6D6 1849 aa12.03□□□□□ -0.48
CDK4-211ENST00000552254 KCNQ3O43525 872 aa12.03□□□□□ -0.48
CDK4-211ENST00000552254 TGFB2P61812 414 aa12.03□□□□□ -0.48
CDK4-211ENST00000552254 LMOD3Q0VAK6 560 aa12.03□□□□□ -0.48
CDK4-211ENST00000552254 INTS5Q6P9B9 1019 aaKnown RBP12.03□□□□□ -0.48
CDK4-211ENST00000552254 TTC5Q8N0Z6 440 aa12.03□□□□□ -0.48
CDK4-211ENST00000552254 CCDC87Q9NVE4 849 aa12.03□□□□□ -0.48
CDK4-211ENST00000552254 TRIM35Q9UPQ4 493 aa12.03□□□□□ -0.48
CDK4-211ENST00000552254 ADRA2BP18089 450 aa12.02□□□□□ -0.49
CDK4-211ENST00000552254 RGS19P49795 217 aa12.02□□□□□ -0.49
CDK4-211ENST00000552254 NLGN1Q8N2Q7 840 aa12.02□□□□□ -0.49
CDK4-211ENST00000552254 ZNF496Q96IT1 587 aaPredicted RBP12.02□□□□□ -0.49
CDK4-211ENST00000552254 BRCA1P38398 1863 aaKnown RBP12.02□□□□□ -0.49
CDK4-211ENST00000552254 CCER2I3L3R5 266 aa12.01□□□□□ -0.49
CDK4-211ENST00000552254 CYP19A1P11511 503 aaPredicted RBP12.01□□□□□ -0.49
CDK4-211ENST00000552254 FKBP8Q14318 412 aa12.01□□□□□ -0.49
CDK4-211ENST00000552254 FAM9BQ8IZU0 186 aa12.01□□□□□ -0.49
CDK4-211ENST00000552254 VSIG10Q8N0Z9 540 aa12.01□□□□□ -0.49
CDK4-211ENST00000552254 MIS18AQ9NYP9 233 aa12.01□□□□□ -0.49
CDK4-211ENST00000552254 ZBTB1Q9Y2K1 713 aa12.01□□□□□ -0.49
CDK4-211ENST00000552254 HEG1Q9ULI3 1381 aa12.01□□□□□ -0.49
CDK4-211ENST00000552254 C10orf71Q711Q0 1435 aa12.01□□□□□ -0.49
CDK4-211ENST00000552254 DPEP1P16444 411 aa12□□□□□ -0.49
CDK4-211ENST00000552254 FMNL2Q96PY5 1086 aa12□□□□□ -0.49
CDK4-211ENST00000552254 PARP3Q9Y6F1 533 aa12□□□□□ -0.49
CDK4-211ENST00000552254 USP42Q9H9J4 1324 aaKnown RBP12□□□□□ -0.49
CDK4-211ENST00000552254 LAMB4A4D0S4 1761 aa12□□□□□ -0.49
CDK4-211ENST00000552254 CANXP27824 592 aaKnown RBP11.99□□□□□ -0.49
CDK4-211ENST00000552254 DDR1Q08345 913 aa11.99□□□□□ -0.49
CDK4-211ENST00000552254 USPL1Q5W0Q7 1092 aa11.99□□□□□ -0.49
CDK4-211ENST00000552254 MIER1Q8N108 512 aa11.99□□□□□ -0.49
CDK4-211ENST00000552254 SOS1Q07889 1333 aaPredicted RBP11.99□□□□□ -0.49
CDK4-211ENST00000552254 TEX13AQ9BXU3 409 aaPredicted RBP11.98□□□□□ -0.49
CDK4-211ENST00000552254 PRDM10Q9NQV6 1147 aa11.98□□□□□ -0.49
CDK4-211ENST00000552254 BABAM1Q9NWV8 329 aa11.98□□□□□ -0.49
CDK4-211ENST00000552254 AFDNP55196 1824 aaKnown RBP11.97□□□□□ -0.49
CDK4-211ENST00000552254 DALRD3Q5D0E6 543 aaKnown RBP11.97□□□□□ -0.49
CDK4-211ENST00000552254 AIDAQ96BJ3 306 aa11.97□□□□□ -0.49
CDK4-211ENST00000552254 PIM2Q9P1W9 311 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms