RNA–Protein interactions for RNA: ENST00000552213.1

CHPT1-207, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-207ENST00000552213 GIGYF1O75420 1035 aaPredicted RBP17.07■□□□□ 0.32
CHPT1-207ENST00000552213 ZNF853P0CG23 659 aa17.07■□□□□ 0.32
CHPT1-207ENST00000552213 CANXP27824 592 aaKnown RBP17.07■□□□□ 0.32
CHPT1-207ENST00000552213 TRAPPC3LQ5T215 181 aa17.07■□□□□ 0.32
CHPT1-207ENST00000552213 COL23A1Q86Y22 540 aaPredicted RBP17.07■□□□□ 0.32
CHPT1-207ENST00000552213 WDR63Q8IWG1 891 aa17.07■□□□□ 0.32
CHPT1-207ENST00000552213 IL16Q14005 1332 aa17.06■□□□□ 0.32
CHPT1-207ENST00000552213 ZBTB7AO95365 584 aa17.06■□□□□ 0.32
CHPT1-207ENST00000552213 NPM2Q86SE8 214 aaKnown RBP17.06■□□□□ 0.32
CHPT1-207ENST00000552213 AMIGO3Q86WK7 504 aa17.06■□□□□ 0.32
CHPT1-207ENST00000552213 ZBTB1Q9Y2K1 713 aa17.06■□□□□ 0.32
CHPT1-207ENST00000552213 ZNF330Q9Y3S2 320 aaPredicted RBP17.06■□□□□ 0.32
CHPT1-207ENST00000552213 UBR2Q8IWV8 1755 aa17.06■□□□□ 0.32
CHPT1-207ENST00000552213 A1BGP04217 495 aa17.05■□□□□ 0.32
CHPT1-207ENST00000552213 TAF1LQ8IZX4 1826 aa17.05■□□□□ 0.32
CHPT1-207ENST00000552213 TJP1Q07157 1748 aa17.04■□□□□ 0.32
CHPT1-207ENST00000552213 RFC4P35249 363 aa17.04■□□□□ 0.32
CHPT1-207ENST00000552213 SLC16A10Q8TF71 515 aa17.04■□□□□ 0.32
CHPT1-207ENST00000552213 TSR2Q969E8 191 aaKnown RBP17.04■□□□□ 0.32
CHPT1-207ENST00000552213 ATF5Q9Y2D1 282 aaPredicted RBP17.04■□□□□ 0.32
CHPT1-207ENST00000552213 KDM3BQ7LBC6 1761 aa17.03■□□□□ 0.32
CHPT1-207ENST00000552213 EIF2S2P20042 333 aaKnown RBP17.03■□□□□ 0.32
CHPT1-207ENST00000552213 KRT24Q2M2I5 525 aa17.03■□□□□ 0.32
CHPT1-207ENST00000552213 ARHGEF1Q92888 912 aaKnown RBP17.03■□□□□ 0.32
CHPT1-207ENST00000552213 ARXQ96QS3 562 aa17.03■□□□□ 0.32
CHPT1-207ENST00000552213 MTFR1LQ9H019 292 aa17.03■□□□□ 0.32
CHPT1-207ENST00000552213 SPON1Q9HCB6 807 aa17.03■□□□□ 0.32
CHPT1-207ENST00000552213 SOS1Q07889 1333 aaPredicted RBP17.02■□□□□ 0.32
CHPT1-207ENST00000552213 PIP4K2AP48426 406 aaPredicted RBP17.02■□□□□ 0.32
CHPT1-207ENST00000552213 MYH16Q9H6N6 1097 aa17.02■□□□□ 0.32
CHPT1-207ENST00000552213 CICQ96RK0 1608 aaPredicted RBP17.02■□□□□ 0.31
CHPT1-207ENST00000552213 COL5A3P25940 1745 aaPredicted RBP17.01■□□□□ 0.31
CHPT1-207ENST00000552213 ELL2O00472 640 aaPredicted RBP17.01■□□□□ 0.31
CHPT1-207ENST00000552213 IL6STP40189 918 aaPredicted RBP17.01■□□□□ 0.31
CHPT1-207ENST00000552213 HNRNPUQ00839 825 aaKnown RBP eCLIP17.01■□□□□ 0.31
CHPT1-207ENST00000552213 DUSP27Q5VZP5 1158 aa17.01■□□□□ 0.31
CHPT1-207ENST00000552213 NECTIN2Q92692 538 aa17.01■□□□□ 0.31
CHPT1-207ENST00000552213 A0A087WZG4 1122 aa17■□□□□ 0.31
CHPT1-207ENST00000552213 ZPR1O75312 459 aa17■□□□□ 0.31
CHPT1-207ENST00000552213 EIF5P55010 431 aaKnown RBP17■□□□□ 0.31
CHPT1-207ENST00000552213 GOLGA2Q08379 1002 aa17■□□□□ 0.31
CHPT1-207ENST00000552213 MSL1Q68DK7 614 aa17■□□□□ 0.31
CHPT1-207ENST00000552213 COL15A1P39059 1388 aa17■□□□□ 0.31
CHPT1-207ENST00000552213 ZNF521Q96K83 1311 aa16.99■□□□□ 0.31
CHPT1-207ENST00000552213 FANCIQ9NVI1 1328 aa16.99■□□□□ 0.31
CHPT1-207ENST00000552213 HOXB7P09629 217 aa16.99■□□□□ 0.31
CHPT1-207ENST00000552213 HDGFL1Q5TGJ6 251 aa16.99■□□□□ 0.31
CHPT1-207ENST00000552213 NBPF26B4DH59 902 aa16.98■□□□□ 0.31
CHPT1-207ENST00000552213 MYL6BP14649 208 aa16.98■□□□□ 0.31
CHPT1-207ENST00000552213 POLD1P28340 1107 aa16.98■□□□□ 0.31
CHPT1-207ENST00000552213 NBPF10Q6P3W6 841 aaKnown RBP16.98■□□□□ 0.31
CHPT1-207ENST00000552213 NBPF15Q8N660 670 aa16.98■□□□□ 0.31
CHPT1-207ENST00000552213 C8orf58Q8NAV2 365 aa16.98■□□□□ 0.31
CHPT1-207ENST00000552213 SPINK5Q9NQ38 1064 aaPredicted RBP16.98■□□□□ 0.31
CHPT1-207ENST00000552213 SRP68Q9UHB9 627 aaKnown RBP16.98■□□□□ 0.31
CHPT1-207ENST00000552213 ERBB4Q15303 1308 aa16.97■□□□□ 0.31
CHPT1-207ENST00000552213 UBR3Q6ZT12 1888 aa16.97■□□□□ 0.31
CHPT1-207ENST00000552213 MYH14Q7Z406 1995 aaKnown RBP16.97■□□□□ 0.31
CHPT1-207ENST00000552213 CHMP4AQ9BY43 222 aa16.97■□□□□ 0.31
CHPT1-207ENST00000552213 PPP1R1BQ9UD71 204 aaPredicted RBP16.97■□□□□ 0.31
CHPT1-207ENST00000552213 TBC1D2BQ9UPU7 963 aa16.97■□□□□ 0.31
CHPT1-207ENST00000552213 CASZ1Q86V15 1759 aa16.97■□□□□ 0.31
CHPT1-207ENST00000552213 USP42Q9H9J4 1324 aaKnown RBP16.96■□□□□ 0.31
CHPT1-207ENST00000552213 QSER1Q2KHR3 1735 aa16.96■□□□□ 0.31
CHPT1-207ENST00000552213 TUBGCP6Q96RT7 1819 aa16.96■□□□□ 0.31
CHPT1-207ENST00000552213 E9PSI1 815 aa16.96■□□□□ 0.31
CHPT1-207ENST00000552213 USPL1Q5W0Q7 1092 aa16.96■□□□□ 0.31
CHPT1-207ENST00000552213 DZIP3Q86Y13 1208 aaKnown RBP16.96■□□□□ 0.31
CHPT1-207ENST00000552213 NLGN1Q8N2Q7 840 aa16.96■□□□□ 0.31
CHPT1-207ENST00000552213 NARFQ9UHQ1 456 aa16.96■□□□□ 0.31
CHPT1-207ENST00000552213 GYS1P13807 737 aa16.95■□□□□ 0.3
CHPT1-207ENST00000552213 EXOSC9Q06265 439 aaKnown RBP16.95■□□□□ 0.3
CHPT1-207ENST00000552213 TWISTNBQ3B726 338 aaPredicted RBP16.95■□□□□ 0.3
CHPT1-207ENST00000552213 TSPYL6Q8N831 410 aa16.95■□□□□ 0.3
CHPT1-207ENST00000552213 PTGER2P43116 358 aa16.94■□□□□ 0.3
CHPT1-207ENST00000552213 CHPF2Q9P2E5 772 aa16.94■□□□□ 0.3
CHPT1-207ENST00000552213 DBF4Q9UBU7 674 aaPredicted RBP16.94■□□□□ 0.3
CHPT1-207ENST00000552213 ANXA1P04083 346 aa16.93■□□□□ 0.3
CHPT1-207ENST00000552213 SLFN5Q08AF3 891 aa16.93■□□□□ 0.3
CHPT1-207ENST00000552213 FKBP8Q14318 412 aa16.93■□□□□ 0.3
CHPT1-207ENST00000552213 PROSER3Q2NL68 480 aa16.93■□□□□ 0.3
CHPT1-207ENST00000552213 CCDC30Q5VVM6 783 aa16.93■□□□□ 0.3
CHPT1-207ENST00000552213 KIF6Q6ZMV9 814 aa16.93■□□□□ 0.3
CHPT1-207ENST00000552213 CDCA7LQ96GN5 454 aa16.93■□□□□ 0.3
CHPT1-207ENST00000552213 DDX21Q9NR30 783 aaKnown RBP eCLIP16.93■□□□□ 0.3
CHPT1-207ENST00000552213 MMP10P09238 476 aa16.92■□□□□ 0.3
CHPT1-207ENST00000552213 PDIA6Q15084 440 aa16.92■□□□□ 0.3
CHPT1-207ENST00000552213 LAMB4A4D0S4 1761 aa16.92■□□□□ 0.3
CHPT1-207ENST00000552213 CAMTA2O94983 1202 aa16.91■□□□□ 0.3
CHPT1-207ENST00000552213 AIMP1Q12904 312 aaKnown RBP16.91■□□□□ 0.3
CHPT1-207ENST00000552213 SGIP1Q9BQI5 828 aa16.91■□□□□ 0.3
CHPT1-207ENST00000552213 STK31Q9BXU1 1019 aa16.91■□□□□ 0.3
CHPT1-207ENST00000552213 ZNF652Q9Y2D9 606 aa16.91■□□□□ 0.3
CHPT1-207ENST00000552213 TCERG1O14776 1098 aaKnown RBP16.9■□□□□ 0.3
CHPT1-207ENST00000552213 BICDL1Q6ZP65 573 aa16.9■□□□□ 0.3
CHPT1-207ENST00000552213 TTLL7Q6ZT98 887 aa16.9■□□□□ 0.3
CHPT1-207ENST00000552213 XAGE3Q8WTP9 111 aa16.9■□□□□ 0.3
CHPT1-207ENST00000552213 HYPKQ9NX55 129 aa16.9■□□□□ 0.3
CHPT1-207ENST00000552213 COPS6Q7L5N1 327 aa16.89■□□□□ 0.29
CHPT1-207ENST00000552213 KLHL34Q8N239 644 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms