RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 TUBGCP6Q96RT7 1819 aa7.82□□□□□ -1.16
HOXB3-213ENST00000552000 CCDC7Q96M83 1385 aa7.82□□□□□ -1.16
HOXB3-213ENST00000552000 PCNTO95613 3336 aa7.81□□□□□ -1.16
HOXB3-213ENST00000552000 LCE2BO14633 110 aa7.81□□□□□ -1.16
HOXB3-213ENST00000552000 HSPA6P17066 643 aa7.81□□□□□ -1.16
HOXB3-213ENST00000552000 FBXW7Q969H0 707 aa7.81□□□□□ -1.16
HOXB3-213ENST00000552000 WBP1LQ9NX94 342 aa7.81□□□□□ -1.16
HOXB3-213ENST00000552000 PIK3C2AO00443 1686 aa7.81□□□□□ -1.16
HOXB3-213ENST00000552000 COL24A1Q17RW2 1714 aa7.81□□□□□ -1.16
HOXB3-213ENST00000552000 QSER1Q2KHR3 1735 aa7.81□□□□□ -1.16
HOXB3-213ENST00000552000 PNPLA7Q6ZV29 1317 aa7.8□□□□□ -1.16
HOXB3-213ENST00000552000 CENPJQ9HC77 1338 aaPredicted RBP7.8□□□□□ -1.16
HOXB3-213ENST00000552000 NBPF1Q3BBV0 1214 aa7.8□□□□□ -1.16
HOXB3-213ENST00000552000 ZNF526Q8TF50 670 aaPredicted RBP7.8□□□□□ -1.16
HOXB3-213ENST00000552000 DDX27Q96GQ7 796 aaKnown RBP7.8□□□□□ -1.16
HOXB3-213ENST00000552000 GPBP1L1Q9HC44 474 aaPredicted RBP7.8□□□□□ -1.16
HOXB3-213ENST00000552000 NLRP2Q9NX02 1062 aa7.8□□□□□ -1.16
HOXB3-213ENST00000552000 TFCP2L1Q9NZI6 479 aa7.8□□□□□ -1.16
HOXB3-213ENST00000552000 ABCC6O95255 1503 aa7.79□□□□□ -1.16
HOXB3-213ENST00000552000 TRPM1Q7Z4N2 1603 aa7.79□□□□□ -1.16
HOXB3-213ENST00000552000 GFRA3O60609 400 aa7.79□□□□□ -1.16
HOXB3-213ENST00000552000 COL9A1P20849 921 aa7.79□□□□□ -1.16
HOXB3-213ENST00000552000 KCNQ4P56696 695 aa7.79□□□□□ -1.16
HOXB3-213ENST00000552000 TYW1BQ6NUM6 668 aa7.79□□□□□ -1.16
HOXB3-213ENST00000552000 TRAF7Q6Q0C0 670 aa7.79□□□□□ -1.16
HOXB3-213ENST00000552000 KCNH5Q8NCM2 988 aa7.79□□□□□ -1.16
HOXB3-213ENST00000552000 LARP6Q9BRS8 491 aaKnown RBP7.79□□□□□ -1.16
HOXB3-213ENST00000552000 KIAA1468Q9P260 1216 aa7.79□□□□□ -1.16
HOXB3-213ENST00000552000 PCDHGA10Q9Y5H3 936 aa7.79□□□□□ -1.16
HOXB3-213ENST00000552000 RAB3GAP2Q9H2M9 1393 aa7.79□□□□□ -1.16
HOXB3-213ENST00000552000 QRICH2Q9H0J4 1663 aa7.79□□□□□ -1.16
HOXB3-213ENST00000552000 TTC21BQ7Z4L5 1316 aa7.78□□□□□ -1.16
HOXB3-213ENST00000552000 IL2RBP14784 551 aa7.78□□□□□ -1.16
HOXB3-213ENST00000552000 SLC27A3Q5K4L6 730 aa7.78□□□□□ -1.16
HOXB3-213ENST00000552000 KIAA1210Q9ULL0 1709 aa7.78□□□□□ -1.16
HOXB3-213ENST00000552000 NFAT5O94916 1531 aa7.78□□□□□ -1.16
HOXB3-213ENST00000552000 MSL1Q68DK7 614 aa7.77□□□□□ -1.17
HOXB3-213ENST00000552000 SEPT9Q9UHD8 586 aaPredicted RBP7.77□□□□□ -1.17
HOXB3-213ENST00000552000 NKX1-1Q15270 411 aaPredicted RBP7.76□□□□□ -1.17
HOXB3-213ENST00000552000 DDX54Q8TDD1 881 aaKnown RBP7.76□□□□□ -1.17
HOXB3-213ENST00000552000 SYTL4Q96C24 671 aaPredicted RBP7.76□□□□□ -1.17
HOXB3-213ENST00000552000 LRCH3Q96II8 777 aa7.76□□□□□ -1.17
HOXB3-213ENST00000552000 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.76□□□□□ -1.17
HOXB3-213ENST00000552000 TSR3Q9UJK0 312 aaKnown RBP7.76□□□□□ -1.17
HOXB3-213ENST00000552000 HPS5Q9UPZ3 1129 aa7.76□□□□□ -1.17
HOXB3-213ENST00000552000 TTC21AQ8NDW8 1320 aa7.76□□□□□ -1.17
HOXB3-213ENST00000552000 ADCY9O60503 1353 aa7.75□□□□□ -1.17
HOXB3-213ENST00000552000 PHF14O94880 888 aa7.75□□□□□ -1.17
HOXB3-213ENST00000552000 COL23A1Q86Y22 540 aaPredicted RBP7.75□□□□□ -1.17
HOXB3-213ENST00000552000 WWC3Q9ULE0 1092 aa7.75□□□□□ -1.17
HOXB3-213ENST00000552000 LTN1O94822 1766 aa7.74□□□□□ -1.17
HOXB3-213ENST00000552000 PRIM1P49642 420 aaKnown RBP7.74□□□□□ -1.17
HOXB3-213ENST00000552000 ANKRD24Q8TF21 1146 aa7.74□□□□□ -1.17
HOXB3-213ENST00000552000 CCNL1Q9UK58 526 aaPredicted RBP7.74□□□□□ -1.17
HOXB3-213ENST00000552000 EVC2Q86UK5 1308 aa7.74□□□□□ -1.17
HOXB3-213ENST00000552000 KTN1Q86UP2 1357 aaKnown RBP7.73□□□□□ -1.17
HOXB3-213ENST00000552000 LY75O60449 1722 aa7.73□□□□□ -1.17
HOXB3-213ENST00000552000 APLP1P51693 650 aa7.73□□□□□ -1.17
HOXB3-213ENST00000552000 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.73□□□□□ -1.17
HOXB3-213ENST00000552000 CD2APQ9Y5K6 639 aa7.73□□□□□ -1.17
HOXB3-213ENST00000552000 DOT1LQ8TEK3 1739 aa7.72□□□□□ -1.17
HOXB3-213ENST00000552000 NRG2O14511 850 aaPredicted RBP7.72□□□□□ -1.17
HOXB3-213ENST00000552000 NME9Q86XW9 330 aa7.72□□□□□ -1.17
HOXB3-213ENST00000552000 LTV1Q96GA3 475 aaPredicted RBP7.72□□□□□ -1.17
HOXB3-213ENST00000552000 TRIM6-TRIM34B2RNG4 842 aa7.71□□□□□ -1.18
HOXB3-213ENST00000552000 DNAJC5GQ8N7S2 189 aa7.71□□□□□ -1.18
HOXB3-213ENST00000552000 EPAS1Q99814 870 aa7.71□□□□□ -1.18
HOXB3-213ENST00000552000 PRKD2Q9BZL6 878 aa7.71□□□□□ -1.18
HOXB3-213ENST00000552000 EMILIN3Q9NT22 766 aa7.71□□□□□ -1.18
HOXB3-213ENST00000552000 IGSF1Q8N6C5 1336 aa7.71□□□□□ -1.18
HOXB3-213ENST00000552000 NSD2O96028 1365 aa7.71□□□□□ -1.18
HOXB3-213ENST00000552000 USP31Q70CQ4 1352 aa7.71□□□□□ -1.18
HOXB3-213ENST00000552000 ANKRD36BQ8N2N9 1353 aa7.71□□□□□ -1.18
HOXB3-213ENST00000552000 MON2Q7Z3U7 1717 aa7.7□□□□□ -1.18
HOXB3-213ENST00000552000 MFSD10Q14728 455 aa7.7□□□□□ -1.18
HOXB3-213ENST00000552000 C6orf132Q5T0Z8 1188 aa7.7□□□□□ -1.18
HOXB3-213ENST00000552000 COL13A1Q5TAT6 717 aaPredicted RBP7.7□□□□□ -1.18
HOXB3-213ENST00000552000 RGPD2P0DJD1 1756 aa7.69□□□□□ -1.18
HOXB3-213ENST00000552000 TAF1LQ8IZX4 1826 aa7.69□□□□□ -1.18
HOXB3-213ENST00000552000 PPP4CP60510 307 aa7.69□□□□□ -1.18
HOXB3-213ENST00000552000 FLAD1Q8NFF5 587 aa7.69□□□□□ -1.18
HOXB3-213ENST00000552000 ZCRB1Q8TBF4 217 aaKnown RBP7.69□□□□□ -1.18
HOXB3-213ENST00000552000 USP54Q70EL1 1684 aa7.69□□□□□ -1.18
HOXB3-213ENST00000552000 USP47Q96K76 1375 aa7.69□□□□□ -1.18
HOXB3-213ENST00000552000 C5P01031 1676 aa7.68□□□□□ -1.18
HOXB3-213ENST00000552000 TOMM70O94826 608 aa7.68□□□□□ -1.18
HOXB3-213ENST00000552000 HTRA3P83110 453 aa7.68□□□□□ -1.18
HOXB3-213ENST00000552000 IP6K1Q92551 441 aa7.68□□□□□ -1.18
HOXB3-213ENST00000552000 SBNO2Q9Y2G9 1366 aa7.68□□□□□ -1.18
HOXB3-213ENST00000552000 SMIM5Q71RC9 77 aa7.67□□□□□ -1.18
HOXB3-213ENST00000552000 AMIGO3Q86WK7 504 aa7.67□□□□□ -1.18
HOXB3-213ENST00000552000 TMC1Q8TDI8 760 aa7.67□□□□□ -1.18
HOXB3-213ENST00000552000 NMRK2Q9NPI5 230 aa7.67□□□□□ -1.18
HOXB3-213ENST00000552000 MEGF6O75095 1541 aa7.67□□□□□ -1.18
HOXB3-213ENST00000552000 FAM208AQ9UK61 1670 aaKnown RBP7.67□□□□□ -1.18
HOXB3-213ENST00000552000 WDR90Q96KV7 1748 aa7.66□□□□□ -1.18
HOXB3-213ENST00000552000 UBR3Q6ZT12 1888 aa7.66□□□□□ -1.18
HOXB3-213ENST00000552000 ZNF787Q6DD87 383 aa7.66□□□□□ -1.18
HOXB3-213ENST00000552000 PACS2Q86VP3 889 aa7.66□□□□□ -1.18
HOXB3-213ENST00000552000 TNS4Q8IZW8 715 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms