RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 DIP2AQ14689 1571 aa28.59■■■□□ 2.17
NPAS3-211ENST00000551634 NWD1Q149M9 1564 aa28.59■■■□□ 2.17
NPAS3-211ENST00000551634 TSPY26PQ9H489 355 aa28.59■■■□□ 2.17
NPAS3-211ENST00000551634 EID1Q9Y6B2 187 aa28.59■■■□□ 2.17
NPAS3-211ENST00000551634 HOXC9P31274 260 aa28.58■■■□□ 2.17
NPAS3-211ENST00000551634 NECTIN2Q92692 538 aa28.58■■■□□ 2.17
NPAS3-211ENST00000551634 SLC26A8Q96RN1 970 aa28.58■■■□□ 2.17
NPAS3-211ENST00000551634 UPF3BQ9BZI7 483 aaKnown RBP28.58■■■□□ 2.17
NPAS3-211ENST00000551634 TBX22Q9Y458 520 aa28.58■■■□□ 2.17
NPAS3-211ENST00000551634 CSPP1Q1MSJ5 1256 aa28.57■■■□□ 2.16
NPAS3-211ENST00000551634 NLRP6P59044 892 aa28.56■■■□□ 2.16
NPAS3-211ENST00000551634 NOL8Q76FK4 1167 aaKnown RBP28.56■■■□□ 2.16
NPAS3-211ENST00000551634 IL1RAPL2Q9NP60 686 aa28.56■■■□□ 2.16
NPAS3-211ENST00000551634 RAD50Q92878 1312 aa28.56■■■□□ 2.16
NPAS3-211ENST00000551634 HDGFL1Q5TGJ6 251 aa28.56■■■□□ 2.16
NPAS3-211ENST00000551634 TMEM87AQ8NBN3 555 aa28.55■■■□□ 2.16
NPAS3-211ENST00000551634 KIF1BPQ96EK5 621 aa28.55■■■□□ 2.16
NPAS3-211ENST00000551634 CHMP4AQ9BY43 222 aa28.55■■■□□ 2.16
NPAS3-211ENST00000551634 USP54Q70EL1 1684 aa28.55■■■□□ 2.16
NPAS3-211ENST00000551634 RGPD8O14715 1765 aaPredicted RBP28.55■■■□□ 2.16
NPAS3-211ENST00000551634 SGSM2O43147 1006 aa28.55■■■□□ 2.16
NPAS3-211ENST00000551634 PPP1R42Q7Z4L9 355 aa28.55■■■□□ 2.16
NPAS3-211ENST00000551634 PI4K2BQ8TCG2 481 aa28.55■■■□□ 2.16
NPAS3-211ENST00000551634 RHPN1Q8TCX5 695 aa28.55■■■□□ 2.16
NPAS3-211ENST00000551634 SURF6O75683 361 aaKnown RBP28.54■■■□□ 2.16
NPAS3-211ENST00000551634 IL25Q9H293 177 aa28.54■■■□□ 2.16
NPAS3-211ENST00000551634 ANKARQ7Z5J8 1434 aa28.53■■■□□ 2.16
NPAS3-211ENST00000551634 NUTM1Q86Y26 1132 aa28.53■■■□□ 2.16
NPAS3-211ENST00000551634 FAM184AQ8NB25 1140 aa28.52■■■□□ 2.16
NPAS3-211ENST00000551634 PDCL3Q9H2J4 239 aa28.52■■■□□ 2.16
NPAS3-211ENST00000551634 SLIT1O75093 1534 aa28.52■■■□□ 2.16
NPAS3-211ENST00000551634 HSP90AB4PQ58FF6 505 aa28.51■■■□□ 2.16
NPAS3-211ENST00000551634 USP48Q86UV5 1035 aa28.51■■■□□ 2.16
NPAS3-211ENST00000551634 CNTROBQ8N137 903 aa28.51■■■□□ 2.16
NPAS3-211ENST00000551634 HOXB7P09629 217 aa28.51■■■□□ 2.15
NPAS3-211ENST00000551634 ARHGAP23Q9P227 1491 aa28.51■■■□□ 2.15
NPAS3-211ENST00000551634 UVSSAQ2YD98 709 aa28.5■■■□□ 2.15
NPAS3-211ENST00000551634 TTC14Q96N46 770 aa28.5■■■□□ 2.15
NPAS3-211ENST00000551634 PHAXQ9H814 394 aaKnown RBP28.5■■■□□ 2.15
NPAS3-211ENST00000551634 KLHL34Q8N239 644 aa28.5■■■□□ 2.15
NPAS3-211ENST00000551634 RNF214Q8ND24 703 aa28.5■■■□□ 2.15
NPAS3-211ENST00000551634 SNX14Q9Y5W7 946 aa28.5■■■□□ 2.15
NPAS3-211ENST00000551634 MARF1Q9Y4F3 1742 aaKnown RBP28.49■■■□□ 2.15
NPAS3-211ENST00000551634 LSG1Q9H089 658 aaKnown RBP28.49■■■□□ 2.15
NPAS3-211ENST00000551634 CEMIPQ8WUJ3 1361 aa28.49■■■□□ 2.15
NPAS3-211ENST00000551634 USP42Q9H9J4 1324 aaKnown RBP28.49■■■□□ 2.15
NPAS3-211ENST00000551634 RPAP1Q9BWH6 1393 aaPredicted RBP28.48■■■□□ 2.15
NPAS3-211ENST00000551634 XPCQ01831 940 aaPredicted RBP28.48■■■□□ 2.15
NPAS3-211ENST00000551634 R3HCC1Q9Y3T6 440 aaKnown RBP28.48■■■□□ 2.15
NPAS3-211ENST00000551634 SRGAP3O43295 1099 aa28.48■■■□□ 2.15
NPAS3-211ENST00000551634 GADD45BO75293 160 aaPredicted RBP28.48■■■□□ 2.15
NPAS3-211ENST00000551634 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.48■■■□□ 2.15
NPAS3-211ENST00000551634 LETM1O95202 739 aaPredicted RBP28.47■■■□□ 2.15
NPAS3-211ENST00000551634 LIMCH1Q9UPQ0 1083 aa28.47■■■□□ 2.15
NPAS3-211ENST00000551634 CRYBG1Q9Y4K1 1723 aa28.47■■■□□ 2.15
NPAS3-211ENST00000551634 TTC41PQ6P2S7 1318 aa28.46■■■□□ 2.15
NPAS3-211ENST00000551634 ZSCAN22P10073 491 aaPredicted RBP28.45■■■□□ 2.15
NPAS3-211ENST00000551634 CCDC183Q5T5S1 534 aa28.45■■■□□ 2.14
NPAS3-211ENST00000551634 GDPD2Q9HCC8 539 aa28.45■■■□□ 2.14
NPAS3-211ENST00000551634 BEND3Q5T5X7 828 aa28.44■■■□□ 2.14
NPAS3-211ENST00000551634 DNAAF4Q8WXU2 420 aa28.44■■■□□ 2.14
NPAS3-211ENST00000551634 MED1Q15648 1581 aaPredicted RBP28.44■■■□□ 2.14
NPAS3-211ENST00000551634 ATP6V1DQ9Y5K8 247 aa28.44■■■□□ 2.14
NPAS3-211ENST00000551634 EIF4A1P60842 406 aaKnown RBP28.43■■■□□ 2.14
NPAS3-211ENST00000551634 GLRX3O76003 335 aaKnown RBP28.43■■■□□ 2.14
NPAS3-211ENST00000551634 MAP4K4O95819 1239 aaPredicted RBP28.43■■■□□ 2.14
NPAS3-211ENST00000551634 AK2P54819 239 aa28.43■■■□□ 2.14
NPAS3-211ENST00000551634 TCHHQ07283 1943 aa28.43■■■□□ 2.14
NPAS3-211ENST00000551634 KDM4FA0A1W2PPD8 638 aa28.42■■■□□ 2.14
NPAS3-211ENST00000551634 NBPF7P0C2Y1 421 aaPredicted RBP28.42■■■□□ 2.14
NPAS3-211ENST00000551634 STX6O43752 255 aa28.42■■■□□ 2.14
NPAS3-211ENST00000551634 PTMAP06454 111 aaKnown RBP28.42■■■□□ 2.14
NPAS3-211ENST00000551634 UBE2HP62256 183 aa28.42■■■□□ 2.14
NPAS3-211ENST00000551634 RUFY2Q8WXA3 655 aa28.42■■■□□ 2.14
NPAS3-211ENST00000551634 RASEFQ8IZ41 740 aa28.41■■■□□ 2.14
NPAS3-211ENST00000551634 MTX1Q13505 466 aa28.41■■■□□ 2.14
NPAS3-211ENST00000551634 FOXD4L6Q3SYB3 417 aaPredicted RBP28.41■■■□□ 2.14
NPAS3-211ENST00000551634 FOXD4L3Q6VB84 417 aaPredicted RBP28.41■■■□□ 2.14
NPAS3-211ENST00000551634 RUFY3Q7L099 469 aa28.41■■■□□ 2.14
NPAS3-211ENST00000551634 ABTB2Q8N961 1025 aa28.41■■■□□ 2.14
NPAS3-211ENST00000551634 MAP7D2Q96T17 732 aa28.41■■■□□ 2.14
NPAS3-211ENST00000551634 LTV1Q96GA3 475 aaPredicted RBP28.4■■■□□ 2.14
NPAS3-211ENST00000551634 SYT1P21579 422 aa28.4■■■□□ 2.14
NPAS3-211ENST00000551634 SMC3Q9UQE7 1217 aa28.4■■■□□ 2.14
NPAS3-211ENST00000551634 EIF2S2P20042 333 aaKnown RBP28.39■■■□□ 2.14
NPAS3-211ENST00000551634 KDM3BQ7LBC6 1761 aa28.39■■■□□ 2.14
NPAS3-211ENST00000551634 PI4KAP2A4QPH2 592 aa28.38■■■□□ 2.13
NPAS3-211ENST00000551634 PI4KAP1Q8N8J0 262 aa28.38■■■□□ 2.13
NPAS3-211ENST00000551634 CNPY2Q9Y2B0 182 aa28.38■■■□□ 2.13
NPAS3-211ENST00000551634 F13A1P00488 732 aa28.38■■■□□ 2.13
NPAS3-211ENST00000551634 NUTM2GQ5VZR2 741 aa28.38■■■□□ 2.13
NPAS3-211ENST00000551634 CWC27Q6UX04 472 aaKnown RBP28.38■■■□□ 2.13
NPAS3-211ENST00000551634 TM6SF1Q9BZW5 370 aa28.38■■■□□ 2.13
NPAS3-211ENST00000551634 CHPF2Q9P2E5 772 aa28.38■■■□□ 2.13
NPAS3-211ENST00000551634 KIAA2012Q0VF49 1180 aa28.37■■■□□ 2.13
NPAS3-211ENST00000551634 ZSCAN31Q96LW9 406 aaPredicted RBP28.37■■■□□ 2.13
NPAS3-211ENST00000551634 SASS6Q6UVJ0 657 aa28.36■■■□□ 2.13
NPAS3-211ENST00000551634 KCNB2Q92953 911 aa28.36■■■□□ 2.13
NPAS3-211ENST00000551634 DIAPH3Q9NSV4 1193 aa28.36■■■□□ 2.13
NPAS3-211ENST00000551634 VPS53Q5VIR6 699 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms