RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 BTBD11A6QL63 1104 aa12.99□□□□□ -0.33
GCN1-208ENST00000551549 POLRMTO00411 1230 aaKnown RBP12.99□□□□□ -0.33
GCN1-208ENST00000551549 STARD3NLO95772 234 aa12.99□□□□□ -0.33
GCN1-208ENST00000551549 BCL2L12Q9HB09 334 aa12.99□□□□□ -0.33
GCN1-208ENST00000551549 NARFQ9UHQ1 456 aa12.99□□□□□ -0.33
GCN1-208ENST00000551549 COL15A1P39059 1388 aa12.98□□□□□ -0.33
GCN1-208ENST00000551549 HEG1Q9ULI3 1381 aa12.98□□□□□ -0.33
GCN1-208ENST00000551549 EIF5P55010 431 aaKnown RBP12.98□□□□□ -0.33
GCN1-208ENST00000551549 DCTN1Q14203 1278 aa12.98□□□□□ -0.33
GCN1-208ENST00000551549 RTF1Q92541 710 aaKnown RBP12.98□□□□□ -0.33
GCN1-208ENST00000551549 FMNL2Q96PY5 1086 aa12.98□□□□□ -0.33
GCN1-208ENST00000551549 C4AP0C0L4 1744 aa12.98□□□□□ -0.33
GCN1-208ENST00000551549 A1BGP04217 495 aa12.97□□□□□ -0.33
GCN1-208ENST00000551549 KCNA3P22001 575 aa12.97□□□□□ -0.33
GCN1-208ENST00000551549 NFIXQ14938 502 aa12.97□□□□□ -0.33
GCN1-208ENST00000551549 BCS1LQ9Y276 419 aa12.97□□□□□ -0.33
GCN1-208ENST00000551549 TEX13AQ9BXU3 409 aaPredicted RBP12.96□□□□□ -0.33
GCN1-208ENST00000551549 ATP10DQ9P241 1426 aa12.96□□□□□ -0.34
GCN1-208ENST00000551549 VIRMAQ69YN4 1812 aaKnown RBP12.95□□□□□ -0.34
GCN1-208ENST00000551549 PRAMEF22A3QJZ6 481 aa12.95□□□□□ -0.34
GCN1-208ENST00000551549 HTATSF1O43719 755 aaKnown RBP12.95□□□□□ -0.34
GCN1-208ENST00000551549 CHRNA5P30532 468 aa12.95□□□□□ -0.34
GCN1-208ENST00000551549 C1QTNF8P60827 252 aa12.95□□□□□ -0.34
GCN1-208ENST00000551549 DDX10Q13206 875 aaKnown RBP12.95□□□□□ -0.34
GCN1-208ENST00000551549 ZNF330Q9Y3S2 320 aaPredicted RBP12.95□□□□□ -0.34
GCN1-208ENST00000551549 UBR2Q8IWV8 1755 aa12.94□□□□□ -0.34
GCN1-208ENST00000551549 A0A087WZG4 1122 aa12.94□□□□□ -0.34
GCN1-208ENST00000551549 GIGYF1O75420 1035 aaPredicted RBP12.94□□□□□ -0.34
GCN1-208ENST00000551549 ARHGAP27Q6ZUM4 889 aa12.94□□□□□ -0.34
GCN1-208ENST00000551549 ZNF526Q8TF50 670 aaPredicted RBP12.94□□□□□ -0.34
GCN1-208ENST00000551549 PLEKHF1Q96S99 279 aa12.94□□□□□ -0.34
GCN1-208ENST00000551549 MIS18AQ9NYP9 233 aa12.94□□□□□ -0.34
GCN1-208ENST00000551549 PIM2Q9P1W9 311 aa12.94□□□□□ -0.34
GCN1-208ENST00000551549 TBC1D2BQ9UPU7 963 aa12.94□□□□□ -0.34
GCN1-208ENST00000551549 USP16Q9Y5T5 823 aa12.94□□□□□ -0.34
GCN1-208ENST00000551549 KIF13BQ9NQT8 1826 aa12.94□□□□□ -0.34
GCN1-208ENST00000551549 ADCY9O60503 1353 aa12.94□□□□□ -0.34
GCN1-208ENST00000551549 KIAA1551Q9HCM1 1747 aa12.93□□□□□ -0.34
GCN1-208ENST00000551549 IL6STP40189 918 aaPredicted RBP12.93□□□□□ -0.34
GCN1-208ENST00000551549 PIP4K2AP48426 406 aaPredicted RBP12.93□□□□□ -0.34
GCN1-208ENST00000551549 BICDL1Q6ZP65 573 aa12.93□□□□□ -0.34
GCN1-208ENST00000551549 SIPA1L3O60292 1781 aaPredicted RBP12.93□□□□□ -0.34
GCN1-208ENST00000551549 N4BP2Q86UW6 1770 aaPredicted RBP12.93□□□□□ -0.34
GCN1-208ENST00000551549 SERPINB2P05120 415 aa12.92□□□□□ -0.34
GCN1-208ENST00000551549 SNRPA1P09661 255 aaKnown RBP12.92□□□□□ -0.34
GCN1-208ENST00000551549 RALBP1Q15311 655 aa12.92□□□□□ -0.34
GCN1-208ENST00000551549 TAF7Q15545 349 aaPredicted RBP12.92□□□□□ -0.34
GCN1-208ENST00000551549 DALRD3Q5D0E6 543 aaKnown RBP12.92□□□□□ -0.34
GCN1-208ENST00000551549 TBC1D9BQ66K14 1250 aa12.92□□□□□ -0.34
GCN1-208ENST00000551549 NFE2L2Q16236 605 aa12.91□□□□□ -0.34
GCN1-208ENST00000551549 THUMPD2Q9BTF0 503 aaKnown RBP12.91□□□□□ -0.34
GCN1-208ENST00000551549 GPBP1L1Q9HC44 474 aaPredicted RBP12.91□□□□□ -0.34
GCN1-208ENST00000551549 CAMTA2O94983 1202 aa12.9□□□□□ -0.34
GCN1-208ENST00000551549 NEFMP07197 916 aa12.9□□□□□ -0.34
GCN1-208ENST00000551549 NPM2Q86SE8 214 aaKnown RBP12.89□□□□□ -0.35
GCN1-208ENST00000551549 C2CD5Q86YS7 1000 aa12.89□□□□□ -0.35
GCN1-208ENST00000551549 CCDC24Q8N4L8 307 aa12.89□□□□□ -0.35
GCN1-208ENST00000551549 CARMIL3Q8ND23 1372 aa12.89□□□□□ -0.35
GCN1-208ENST00000551549 MAPK8IP3Q9UPT6 1336 aa12.88□□□□□ -0.35
GCN1-208ENST00000551549 NBPF26B4DH59 902 aa12.88□□□□□ -0.35
GCN1-208ENST00000551549 NBPF10Q6P3W6 841 aaKnown RBP12.88□□□□□ -0.35
GCN1-208ENST00000551549 DZIP3Q86Y13 1208 aaKnown RBP12.88□□□□□ -0.35
GCN1-208ENST00000551549 NBPF15Q8N660 670 aa12.88□□□□□ -0.35
GCN1-208ENST00000551549 PNNQ9H307 717 aaKnown RBP12.88□□□□□ -0.35
GCN1-208ENST00000551549 SENP3-EIF4A1A0A087X0R7 540 aa12.87□□□□□ -0.35
GCN1-208ENST00000551549 C9orf131Q5VYM1 1079 aa12.87□□□□□ -0.35
GCN1-208ENST00000551549 PRR5LQ6MZQ0 368 aa12.87□□□□□ -0.35
GCN1-208ENST00000551549 PNISRQ8TF01 805 aaKnown RBP12.87□□□□□ -0.35
GCN1-208ENST00000551549 SETDB2Q96T68 719 aa12.87□□□□□ -0.35
GCN1-208ENST00000551549 H0YIN7 160 aa12.86□□□□□ -0.35
GCN1-208ENST00000551549 EIF4A1P60842 406 aaKnown RBP12.86□□□□□ -0.35
GCN1-208ENST00000551549 BRIP1Q9BX63 1249 aa12.86□□□□□ -0.35
GCN1-208ENST00000551549 MYBBP1AQ9BQG0 1328 aaKnown RBP12.86□□□□□ -0.35
GCN1-208ENST00000551549 AFDNP55196 1824 aaKnown RBP12.85□□□□□ -0.35
GCN1-208ENST00000551549 RIPK4P57078 832 aa12.85□□□□□ -0.35
GCN1-208ENST00000551549 TTLL6Q8N841 843 aa12.85□□□□□ -0.35
GCN1-208ENST00000551549 NRXN2Q9P2S2 1712 aa12.85□□□□□ -0.35
GCN1-208ENST00000551549 BRCA1P38398 1863 aaKnown RBP12.85□□□□□ -0.35
GCN1-208ENST00000551549 KIF3CO14782 793 aa12.84□□□□□ -0.35
GCN1-208ENST00000551549 RASSF7Q02833 373 aa12.84□□□□□ -0.35
GCN1-208ENST00000551549 CLEC4GQ6UXB4 293 aa12.84□□□□□ -0.35
GCN1-208ENST00000551549 CCDC146Q8IYE0 955 aa12.84□□□□□ -0.35
GCN1-208ENST00000551549 CNBD1Q8NA66 436 aa12.84□□□□□ -0.35
GCN1-208ENST00000551549 ZNF622Q969S3 477 aaKnown RBP eCLIP12.84□□□□□ -0.35
GCN1-208ENST00000551549 RRP7AQ9Y3A4 280 aaKnown RBP12.84□□□□□ -0.35
GCN1-208ENST00000551549 PDE6BP35913 854 aa12.83□□□□□ -0.36
GCN1-208ENST00000551549 TMPOP42166 694 aaKnown RBP12.83□□□□□ -0.36
GCN1-208ENST00000551549 HLFQ16534 295 aa12.83□□□□□ -0.36
GCN1-208ENST00000551549 NGEFQ8N5V2 710 aa12.83□□□□□ -0.36
GCN1-208ENST00000551549 RNF181Q9P0P0 153 aa12.83□□□□□ -0.36
GCN1-208ENST00000551549 TSPYL4Q9UJ04 414 aa12.83□□□□□ -0.36
GCN1-208ENST00000551549 ZNF652Q9Y2D9 606 aa12.83□□□□□ -0.36
GCN1-208ENST00000551549 PCNTO95613 3336 aa12.83□□□□□ -0.36
GCN1-208ENST00000551549 NPHP1O15259 732 aa12.82□□□□□ -0.36
GCN1-208ENST00000551549 PRELPP51888 382 aa12.82□□□□□ -0.36
GCN1-208ENST00000551549 ST5P78524 1137 aa12.82□□□□□ -0.36
GCN1-208ENST00000551549 NBPF5PQ86XG9 351 aaPredicted RBP12.82□□□□□ -0.36
GCN1-208ENST00000551549 ZNF219Q9P2Y4 722 aaPredicted RBP12.82□□□□□ -0.36
GCN1-208ENST00000551549 NIP7Q9Y221 180 aaKnown RBP eCLIP12.82□□□□□ -0.36
GCN1-208ENST00000551549 SCN7AQ01118 1682 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms