RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 CCDC82Q8N4S0 544 aa8.72□□□□□ -1.01
PFDN5-209ENST00000550069 TPCN2Q8NHX9 752 aa8.72□□□□□ -1.01
PFDN5-209ENST00000550069 SIRT1Q96EB6 747 aa8.72□□□□□ -1.01
PFDN5-209ENST00000550069 TNIKQ9UKE5 1360 aa8.72□□□□□ -1.01
PFDN5-209ENST00000550069 EFCAB5A4FU69 1503 aa8.71□□□□□ -1.01
PFDN5-209ENST00000550069 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.71□□□□□ -1.02
PFDN5-209ENST00000550069 SFI1A8K8P3 1242 aa8.71□□□□□ -1.02
PFDN5-209ENST00000550069 TERTO14746 1132 aaKnown RBP8.71□□□□□ -1.02
PFDN5-209ENST00000550069 LGR5O75473 907 aa8.71□□□□□ -1.02
PFDN5-209ENST00000550069 TLR1Q15399 786 aa8.71□□□□□ -1.02
PFDN5-209ENST00000550069 SLC27A3Q5K4L6 730 aa8.71□□□□□ -1.02
PFDN5-209ENST00000550069 DNAAF2Q9NVR5 837 aaKnown RBP8.71□□□□□ -1.02
PFDN5-209ENST00000550069 CUEDC1Q9NWM3 386 aaPredicted RBP8.71□□□□□ -1.02
PFDN5-209ENST00000550069 ERBB4Q15303 1308 aa8.71□□□□□ -1.02
PFDN5-209ENST00000550069 UHRF1BP1LA0JNW5 1464 aa8.7□□□□□ -1.02
PFDN5-209ENST00000550069 SLC35F4A4IF30 521 aa8.7□□□□□ -1.02
PFDN5-209ENST00000550069 LZTS3O60299 673 aaPredicted RBP8.7□□□□□ -1.02
PFDN5-209ENST00000550069 PPFIA3O75145 1194 aa8.7□□□□□ -1.02
PFDN5-209ENST00000550069 RASA1P20936 1047 aa8.7□□□□□ -1.02
PFDN5-209ENST00000550069 GPC1P35052 558 aa8.7□□□□□ -1.02
PFDN5-209ENST00000550069 PHKA2P46019 1235 aa8.7□□□□□ -1.02
PFDN5-209ENST00000550069 ZNF295-AS1Q8N0V1 137 aa8.7□□□□□ -1.02
PFDN5-209ENST00000550069 NXF1Q9UBU9 619 aaKnown RBP8.7□□□□□ -1.02
PFDN5-209ENST00000550069 KIAA0556O60303 1618 aa8.69□□□□□ -1.02
PFDN5-209ENST00000550069 H3BM21 787 aa8.69□□□□□ -1.02
PFDN5-209ENST00000550069 WASLO00401 505 aaPredicted RBP8.69□□□□□ -1.02
PFDN5-209ENST00000550069 SRPK2P78362 688 aaKnown RBP8.69□□□□□ -1.02
PFDN5-209ENST00000550069 TBCELQ5QJ74 424 aa8.69□□□□□ -1.02
PFDN5-209ENST00000550069 CCDC102BQ68D86 513 aa8.69□□□□□ -1.02
PFDN5-209ENST00000550069 NBPF10Q6P3W6 841 aaKnown RBP8.69□□□□□ -1.02
PFDN5-209ENST00000550069 NBPF15Q8N660 670 aa8.69□□□□□ -1.02
PFDN5-209ENST00000550069 CCDC155Q8N6L0 562 aa8.69□□□□□ -1.02
PFDN5-209ENST00000550069 GAS2L2Q8NHY3 880 aa8.69□□□□□ -1.02
PFDN5-209ENST00000550069 SMTNP53814 917 aa8.68□□□□□ -1.02
PFDN5-209ENST00000550069 EPHA4P54764 986 aa8.68□□□□□ -1.02
PFDN5-209ENST00000550069 PTK7Q13308 1070 aa8.68□□□□□ -1.02
PFDN5-209ENST00000550069 C4orf17Q53FE4 359 aa8.68□□□□□ -1.02
PFDN5-209ENST00000550069 ESCO1Q5FWF5 840 aa8.68□□□□□ -1.02
PFDN5-209ENST00000550069 TRIM50Q86XT4 487 aa8.68□□□□□ -1.02
PFDN5-209ENST00000550069 TNS4Q8IZW8 715 aa8.68□□□□□ -1.02
PFDN5-209ENST00000550069 ZSCAN10Q96SZ4 725 aaPredicted RBP8.68□□□□□ -1.02
PFDN5-209ENST00000550069 IQSEC3Q9UPP2 1182 aaPredicted RBP8.68□□□□□ -1.02
PFDN5-209ENST00000550069 PTPRGP23470 1445 aa8.68□□□□□ -1.02
PFDN5-209ENST00000550069 USP17L15C9J2P7 530 aa8.67□□□□□ -1.02
PFDN5-209ENST00000550069 USP17L10C9JJH3 530 aa8.67□□□□□ -1.02
PFDN5-209ENST00000550069 USP17L13C9JLJ4 530 aa8.67□□□□□ -1.02
PFDN5-209ENST00000550069 USP17L12C9JPN9 530 aa8.67□□□□□ -1.02
PFDN5-209ENST00000550069 USP17L11C9JVI0 530 aa8.67□□□□□ -1.02
PFDN5-209ENST00000550069 USP17L21D6R901 530 aa8.67□□□□□ -1.02
PFDN5-209ENST00000550069 USP17L18D6R9N7 530 aa8.67□□□□□ -1.02
PFDN5-209ENST00000550069 USP17L22D6RA61 530 aa8.67□□□□□ -1.02
PFDN5-209ENST00000550069 USP17L17D6RBQ6 530 aa8.67□□□□□ -1.02
PFDN5-209ENST00000550069 USP17L19D6RCP7 530 aa8.67□□□□□ -1.02
PFDN5-209ENST00000550069 USP17L20D6RJB6 530 aa8.67□□□□□ -1.02
PFDN5-209ENST00000550069 USP17L24Q0WX57 530 aa8.67□□□□□ -1.02
PFDN5-209ENST00000550069 SAMD9Q5K651 1589 aa8.67□□□□□ -1.02
PFDN5-209ENST00000550069 CYB5RLQ6IPT4 315 aa8.67□□□□□ -1.02
PFDN5-209ENST00000550069 SIX5Q8N196 739 aa8.67□□□□□ -1.02
PFDN5-209ENST00000550069 TSEN2Q8NCE0 465 aaKnown RBP8.67□□□□□ -1.02
PFDN5-209ENST00000550069 TRIM52Q96A61 297 aa8.67□□□□□ -1.02
PFDN5-209ENST00000550069 DISP1Q96F81 1524 aa8.67□□□□□ -1.02
PFDN5-209ENST00000550069 SLC4A9Q96Q91 983 aa8.67□□□□□ -1.02
PFDN5-209ENST00000550069 MAPKBP1O60336 1514 aa8.66□□□□□ -1.02
PFDN5-209ENST00000550069 SPATA31C2B4DYI2 1134 aa8.66□□□□□ -1.02
PFDN5-209ENST00000550069 THBS1P07996 1170 aa8.66□□□□□ -1.02
PFDN5-209ENST00000550069 ARXQ96QS3 562 aa8.66□□□□□ -1.02
PFDN5-209ENST00000550069 VRTNQ9H8Y1 702 aa8.66□□□□□ -1.02
PFDN5-209ENST00000550069 A6NJY4 79 aa8.65□□□□□ -1.02
PFDN5-209ENST00000550069 ATP1A2P50993 1020 aa8.65□□□□□ -1.02
PFDN5-209ENST00000550069 DPYDQ12882 1025 aa8.65□□□□□ -1.02
PFDN5-209ENST00000550069 MTFR1Q15390 333 aa8.65□□□□□ -1.02
PFDN5-209ENST00000550069 SH3PXD2AQ5TCZ1 1133 aa8.65□□□□□ -1.02
PFDN5-209ENST00000550069 TREML4Q6UXN2 200 aa8.65□□□□□ -1.02
PFDN5-209ENST00000550069 PPARGC1BQ86YN6 1023 aaKnown RBP8.65□□□□□ -1.02
PFDN5-209ENST00000550069 LARGE2Q8N3Y3 721 aa8.65□□□□□ -1.02
PFDN5-209ENST00000550069 GPR161Q8N6U8 529 aaKnown RBP8.65□□□□□ -1.02
PFDN5-209ENST00000550069 ZDHHC1Q8WTX9 485 aa8.65□□□□□ -1.02
PFDN5-209ENST00000550069 ZMIZ1Q9ULJ6 1067 aa8.65□□□□□ -1.02
PFDN5-209ENST00000550069 PARP3Q9Y6F1 533 aa8.65□□□□□ -1.02
PFDN5-209ENST00000550069 UACAQ9BZF9 1416 aa8.64□□□□□ -1.03
PFDN5-209ENST00000550069 WFS1O76024 890 aa8.64□□□□□ -1.03
PFDN5-209ENST00000550069 FOXK2Q01167 660 aa8.64□□□□□ -1.03
PFDN5-209ENST00000550069 TMEM214Q6NUQ4 689 aaKnown RBP8.64□□□□□ -1.03
PFDN5-209ENST00000550069 TAS1R3Q7RTX0 852 aa8.64□□□□□ -1.03
PFDN5-209ENST00000550069 KLRG1Q96E93 195 aa8.64□□□□□ -1.03
PFDN5-209ENST00000550069 CCDC97Q96F63 343 aaPredicted RBP8.64□□□□□ -1.03
PFDN5-209ENST00000550069 SCHIP1Q9P0W5 487 aaPredicted RBP8.64□□□□□ -1.03
PFDN5-209ENST00000550069 ABCC2Q92887 1545 aa8.64□□□□□ -1.03
PFDN5-209ENST00000550069 ITGA6P23229 1130 aa8.63□□□□□ -1.03
PFDN5-209ENST00000550069 PLA2G4AP47712 749 aa8.63□□□□□ -1.03
PFDN5-209ENST00000550069 STK32AQ8WU08 396 aa8.63□□□□□ -1.03
PFDN5-209ENST00000550069 TSPAN10Q9H1Z9 355 aaPredicted RBP8.63□□□□□ -1.03
PFDN5-209ENST00000550069 ERCC6L2Q5T890 1561 aa8.62□□□□□ -1.03
PFDN5-209ENST00000550069 FAM196BA6NMK8 535 aa8.62□□□□□ -1.03
PFDN5-209ENST00000550069 LARP1Q6PKG0 1096 aaKnown RBP8.62□□□□□ -1.03
PFDN5-209ENST00000550069 ANKMY2Q8IV38 441 aa8.62□□□□□ -1.03
PFDN5-209ENST00000550069 RHBDD1Q8TEB9 315 aa8.62□□□□□ -1.03
PFDN5-209ENST00000550069 GAS2L1Q99501 681 aaPredicted RBP8.62□□□□□ -1.03
PFDN5-209ENST00000550069 GPAMQ9HCL2 828 aa8.62□□□□□ -1.03
PFDN5-209ENST00000550069 TIMMDC1Q9NPL8 285 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms