RNA–Protein interactions for RNA: ENST00000546489.5

CDK4-203, Transcript of cyclin dependent kinase 4, humanhuman

TSL 5

Gene CDK4, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-203ENST00000546489 MBIPQ9NS73 344 aa17.09■□□□□ 0.33
CDK4-203ENST00000546489 PNPLA7Q6ZV29 1317 aa17.09■□□□□ 0.33
CDK4-203ENST00000546489 ZNF521Q96K83 1311 aa17.09■□□□□ 0.33
CDK4-203ENST00000546489 PRAMEF22A3QJZ6 481 aa17.08■□□□□ 0.32
CDK4-203ENST00000546489 GNPATO15228 680 aa17.08■□□□□ 0.32
CDK4-203ENST00000546489 SSFA2P28290 1259 aa17.08■□□□□ 0.32
CDK4-203ENST00000546489 INTS5Q6P9B9 1019 aaKnown RBP17.08■□□□□ 0.32
CDK4-203ENST00000546489 RPS6KA4O75676 772 aa17.07■□□□□ 0.32
CDK4-203ENST00000546489 AMIGO3Q86WK7 504 aa17.07■□□□□ 0.32
CDK4-203ENST00000546489 FLAD1Q8NFF5 587 aa17.07■□□□□ 0.32
CDK4-203ENST00000546489 CCDC87Q9NVE4 849 aa17.07■□□□□ 0.32
CDK4-203ENST00000546489 RTCBQ9Y3I0 505 aaKnown RBP17.07■□□□□ 0.32
CDK4-203ENST00000546489 USP16Q9Y5T5 823 aa17.07■□□□□ 0.32
CDK4-203ENST00000546489 PDGFDQ9GZP0 370 aaPredicted RBP17.06■□□□□ 0.32
CDK4-203ENST00000546489 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.05■□□□□ 0.32
CDK4-203ENST00000546489 ADRA2BP18089 450 aa17.05■□□□□ 0.32
CDK4-203ENST00000546489 COL23A1Q86Y22 540 aaPredicted RBP17.05■□□□□ 0.32
CDK4-203ENST00000546489 ZBTB1Q9Y2K1 713 aa17.05■□□□□ 0.32
CDK4-203ENST00000546489 SOS1Q07889 1333 aaPredicted RBP17.04■□□□□ 0.32
CDK4-203ENST00000546489 BCORQ6W2J9 1755 aa17.03■□□□□ 0.32
CDK4-203ENST00000546489 A1BGP04217 495 aa17.03■□□□□ 0.32
CDK4-203ENST00000546489 HOXB7P09629 217 aa17.03■□□□□ 0.32
CDK4-203ENST00000546489 KRT24Q2M2I5 525 aa17.03■□□□□ 0.32
CDK4-203ENST00000546489 TRAPPC3LQ5T215 181 aa17.03■□□□□ 0.32
CDK4-203ENST00000546489 SLC16A10Q8TF71 515 aa17.03■□□□□ 0.32
CDK4-203ENST00000546489 LRP5O75197 1615 aa17.03■□□□□ 0.32
CDK4-203ENST00000546489 CACNA1FO60840 1977 aa17.02■□□□□ 0.32
CDK4-203ENST00000546489 SCN7AQ01118 1682 aa17.02■□□□□ 0.32
CDK4-203ENST00000546489 PHF14O94880 888 aa17.02■□□□□ 0.32
CDK4-203ENST00000546489 IL6STP40189 918 aaPredicted RBP17.02■□□□□ 0.32
CDK4-203ENST00000546489 SMIM5Q71RC9 77 aa17.02■□□□□ 0.32
CDK4-203ENST00000546489 TSR2Q969E8 191 aaKnown RBP17.02■□□□□ 0.32
CDK4-203ENST00000546489 SPINK5Q9NQ38 1064 aaPredicted RBP17.02■□□□□ 0.32
CDK4-203ENST00000546489 COL15A1P39059 1388 aa17.02■□□□□ 0.31
CDK4-203ENST00000546489 FANCIQ9NVI1 1328 aa17.01■□□□□ 0.31
CDK4-203ENST00000546489 CANXP27824 592 aaKnown RBP17.01■□□□□ 0.31
CDK4-203ENST00000546489 EIF5P55010 431 aaKnown RBP17.01■□□□□ 0.31
CDK4-203ENST00000546489 GOLGA2Q08379 1002 aa17.01■□□□□ 0.31
CDK4-203ENST00000546489 ARHGEF1Q92888 912 aaKnown RBP17.01■□□□□ 0.31
CDK4-203ENST00000546489 ERBB4Q15303 1308 aa17■□□□□ 0.31
CDK4-203ENST00000546489 NBPF26B4DH59 902 aa17■□□□□ 0.31
CDK4-203ENST00000546489 DUSP27Q5VZP5 1158 aa17■□□□□ 0.31
CDK4-203ENST00000546489 NBPF10Q6P3W6 841 aaKnown RBP17■□□□□ 0.31
CDK4-203ENST00000546489 NBPF15Q8N660 670 aa17■□□□□ 0.31
CDK4-203ENST00000546489 MTFR1LQ9H019 292 aa17■□□□□ 0.31
CDK4-203ENST00000546489 MYH16Q9H6N6 1097 aa17■□□□□ 0.31
CDK4-203ENST00000546489 MSH5O43196 834 aa16.99■□□□□ 0.31
CDK4-203ENST00000546489 HNRNPUQ00839 825 aaKnown RBP eCLIP16.99■□□□□ 0.31
CDK4-203ENST00000546489 C8orf58Q8NAV2 365 aa16.99■□□□□ 0.31
CDK4-203ENST00000546489 A0A087WZG4 1122 aa16.98■□□□□ 0.31
CDK4-203ENST00000546489 E9PSI1 815 aa16.98■□□□□ 0.31
CDK4-203ENST00000546489 ZBTB7AO95365 584 aa16.98■□□□□ 0.31
CDK4-203ENST00000546489 EIF2S2P20042 333 aaKnown RBP16.98■□□□□ 0.31
CDK4-203ENST00000546489 RFC4P35249 363 aa16.98■□□□□ 0.31
CDK4-203ENST00000546489 NUP98P52948 1817 aa16.98■□□□□ 0.31
CDK4-203ENST00000546489 USP42Q9H9J4 1324 aaKnown RBP16.97■□□□□ 0.31
CDK4-203ENST00000546489 PIP4K2AP48426 406 aaPredicted RBP16.97■□□□□ 0.31
CDK4-203ENST00000546489 SLFN5Q08AF3 891 aa16.97■□□□□ 0.31
CDK4-203ENST00000546489 NARFQ9UHQ1 456 aa16.97■□□□□ 0.31
CDK4-203ENST00000546489 ELL2O00472 640 aaPredicted RBP16.96■□□□□ 0.31
CDK4-203ENST00000546489 PDIA6Q15084 440 aa16.96■□□□□ 0.31
CDK4-203ENST00000546489 HDGFL1Q5TGJ6 251 aa16.96■□□□□ 0.31
CDK4-203ENST00000546489 TSPYL6Q8N831 410 aa16.96■□□□□ 0.31
CDK4-203ENST00000546489 SPON1Q9HCB6 807 aa16.96■□□□□ 0.31
CDK4-203ENST00000546489 EXOSC9Q06265 439 aaKnown RBP16.95■□□□□ 0.3
CDK4-203ENST00000546489 TWISTNBQ3B726 338 aaPredicted RBP16.95■□□□□ 0.3
CDK4-203ENST00000546489 LRP10Q7Z4F1 713 aa16.95■□□□□ 0.3
CDK4-203ENST00000546489 NPM2Q86SE8 214 aaKnown RBP16.95■□□□□ 0.3
CDK4-203ENST00000546489 TRMT2AQ8IZ69 625 aaKnown RBP16.95■□□□□ 0.3
CDK4-203ENST00000546489 CDCA7LQ96GN5 454 aa16.95■□□□□ 0.3
CDK4-203ENST00000546489 CHMP4AQ9BY43 222 aa16.95■□□□□ 0.3
CDK4-203ENST00000546489 ZNF330Q9Y3S2 320 aaPredicted RBP16.95■□□□□ 0.3
CDK4-203ENST00000546489 ZBED9Q6R2W3 1325 aa16.95■□□□□ 0.3
CDK4-203ENST00000546489 ZPR1O75312 459 aa16.94■□□□□ 0.3
CDK4-203ENST00000546489 GYS1P13807 737 aa16.94■□□□□ 0.3
CDK4-203ENST00000546489 PTGER2P43116 358 aa16.94■□□□□ 0.3
CDK4-203ENST00000546489 NECTIN2Q92692 538 aa16.94■□□□□ 0.3
CDK4-203ENST00000546489 SGIP1Q9BQI5 828 aa16.94■□□□□ 0.3
CDK4-203ENST00000546489 DDX21Q9NR30 783 aaKnown RBP eCLIP16.94■□□□□ 0.3
CDK4-203ENST00000546489 SRP68Q9UHB9 627 aaKnown RBP16.94■□□□□ 0.3
CDK4-203ENST00000546489 ATF5Q9Y2D1 282 aaPredicted RBP16.94■□□□□ 0.3
CDK4-203ENST00000546489 ANKRD36CQ5JPF3 1778 aa16.94■□□□□ 0.3
CDK4-203ENST00000546489 MYL6BP14649 208 aa16.93■□□□□ 0.3
CDK4-203ENST00000546489 PROSER3Q2NL68 480 aa16.93■□□□□ 0.3
CDK4-203ENST00000546489 NLGN1Q8N2Q7 840 aa16.93■□□□□ 0.3
CDK4-203ENST00000546489 CHPF2Q9P2E5 772 aa16.93■□□□□ 0.3
CDK4-203ENST00000546489 DBF4Q9UBU7 674 aaPredicted RBP16.93■□□□□ 0.3
CDK4-203ENST00000546489 AFDNP55196 1824 aaKnown RBP16.93■□□□□ 0.3
CDK4-203ENST00000546489 VAMP4O75379 141 aa16.92■□□□□ 0.3
CDK4-203ENST00000546489 CCDC30Q5VVM6 783 aa16.92■□□□□ 0.3
CDK4-203ENST00000546489 USPL1Q5W0Q7 1092 aa16.92■□□□□ 0.3
CDK4-203ENST00000546489 MSL1Q68DK7 614 aa16.92■□□□□ 0.3
CDK4-203ENST00000546489 DZIP3Q86Y13 1208 aaKnown RBP16.92■□□□□ 0.3
CDK4-203ENST00000546489 BCL2L12Q9HB09 334 aa16.92■□□□□ 0.3
CDK4-203ENST00000546489 TBC1D2BQ9UPU7 963 aa16.92■□□□□ 0.3
CDK4-203ENST00000546489 RGL2O15211 777 aa16.91■□□□□ 0.3
CDK4-203ENST00000546489 CAMTA2O94983 1202 aa16.91■□□□□ 0.3
CDK4-203ENST00000546489 ANXA1P04083 346 aa16.91■□□□□ 0.3
CDK4-203ENST00000546489 ARFGEF2Q9Y6D5 1785 aa16.91■□□□□ 0.3
CDK4-203ENST00000546489 NRXN2Q9P2S2 1712 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms