RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 ATRNO75882 1429 aa28.48■■■□□ 2.15
FOXA1-202ENST00000545425 SLIT2O94813 1529 aa28.47■■■□□ 2.15
FOXA1-202ENST00000545425 FKBP5Q13451 457 aaPredicted RBP28.47■■■□□ 2.15
FOXA1-202ENST00000545425 IL17RAQ96F46 866 aa28.47■■■□□ 2.15
FOXA1-202ENST00000545425 RBM42Q9BTD8 480 aaKnown RBP28.47■■■□□ 2.15
FOXA1-202ENST00000545425 MIS18AQ9NYP9 233 aa28.47■■■□□ 2.15
FOXA1-202ENST00000545425 MCCP23508 829 aa28.46■■■□□ 2.15
FOXA1-202ENST00000545425 ANAPC15P60006 121 aa28.46■■■□□ 2.15
FOXA1-202ENST00000545425 OTUD7AQ8TE49 926 aaPredicted RBP28.46■■■□□ 2.15
FOXA1-202ENST00000545425 GRPEL1Q9HAV7 217 aa28.46■■■□□ 2.15
FOXA1-202ENST00000545425 CEMIPQ8WUJ3 1361 aa28.46■■■□□ 2.15
FOXA1-202ENST00000545425 SMARCA5O60264 1052 aaPredicted RBP28.46■■■□□ 2.15
FOXA1-202ENST00000545425 ABTB2Q8N961 1025 aa28.46■■■□□ 2.15
FOXA1-202ENST00000545425 RAB11FIP3O75154 756 aa28.44■■■□□ 2.14
FOXA1-202ENST00000545425 F6X3S4 739 aa28.43■■■□□ 2.14
FOXA1-202ENST00000545425 CYP2E1P05181 493 aaPredicted RBP28.43■■■□□ 2.14
FOXA1-202ENST00000545425 KLHL40Q2TBA0 621 aa28.43■■■□□ 2.14
FOXA1-202ENST00000545425 IP6K1Q92551 441 aa28.43■■■□□ 2.14
FOXA1-202ENST00000545425 GZF1Q9H116 711 aaPredicted RBP28.43■■■□□ 2.14
FOXA1-202ENST00000545425 IL17REQ8NFR9 667 aa28.43■■■□□ 2.14
FOXA1-202ENST00000545425 OVOS2A0A0G2JMS6 1433 aa28.42■■■□□ 2.14
FOXA1-202ENST00000545425 MX1P20591 662 aa28.42■■■□□ 2.14
FOXA1-202ENST00000545425 KCNH5Q8NCM2 988 aa28.42■■■□□ 2.14
FOXA1-202ENST00000545425 GJD4Q96KN9 370 aaPredicted RBP28.42■■■□□ 2.14
FOXA1-202ENST00000545425 LTN1O94822 1766 aa28.42■■■□□ 2.14
FOXA1-202ENST00000545425 NFAT5O94916 1531 aa28.42■■■□□ 2.14
FOXA1-202ENST00000545425 BAG4O95429 457 aaKnown RBP28.41■■■□□ 2.14
FOXA1-202ENST00000545425 NUTM2GQ5VZR2 741 aa28.41■■■□□ 2.14
FOXA1-202ENST00000545425 ABCA3Q99758 1704 aa28.41■■■□□ 2.14
FOXA1-202ENST00000545425 NCAPD2Q15021 1401 aa28.4■■■□□ 2.14
FOXA1-202ENST00000545425 SSFA2P28290 1259 aa28.39■■■□□ 2.14
FOXA1-202ENST00000545425 UBTFL1P0CB47 393 aaPredicted RBP28.39■■■□□ 2.13
FOXA1-202ENST00000545425 KDM3BQ7LBC6 1761 aa28.38■■■□□ 2.13
FOXA1-202ENST00000545425 LMO7Q8WWI1 1683 aa28.38■■■□□ 2.13
FOXA1-202ENST00000545425 SSH3Q8TE77 659 aa28.38■■■□□ 2.13
FOXA1-202ENST00000545425 ESYT1Q9BSJ8 1104 aa28.38■■■□□ 2.13
FOXA1-202ENST00000545425 VPS72Q15906 364 aa28.37■■■□□ 2.13
FOXA1-202ENST00000545425 PRDM11Q9NQV5 511 aa28.37■■■□□ 2.13
FOXA1-202ENST00000545425 HDGFL1Q5TGJ6 251 aa28.36■■■□□ 2.13
FOXA1-202ENST00000545425 HDAC5Q9UQL6 1122 aa28.36■■■□□ 2.13
FOXA1-202ENST00000545425 APBB1O00213 710 aa28.36■■■□□ 2.13
FOXA1-202ENST00000545425 HSP90AB4PQ58FF6 505 aa28.36■■■□□ 2.13
FOXA1-202ENST00000545425 BTG4Q9NY30 223 aa28.36■■■□□ 2.13
FOXA1-202ENST00000545425 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.35■■■□□ 2.13
FOXA1-202ENST00000545425 EXOC6BQ9Y2D4 811 aa28.34■■■□□ 2.13
FOXA1-202ENST00000545425 USP44Q9H0E7 712 aa28.34■■■□□ 2.13
FOXA1-202ENST00000545425 POLA2Q14181 598 aa28.33■■■□□ 2.13
FOXA1-202ENST00000545425 NWD2Q9ULI1 1742 aa28.32■■■□□ 2.12
FOXA1-202ENST00000545425 ZC3H6P61129 1189 aaKnown RBP28.32■■■□□ 2.12
FOXA1-202ENST00000545425 AMOTQ4VCS5 1084 aa28.32■■■□□ 2.12
FOXA1-202ENST00000545425 INTS4Q96HW7 963 aaKnown RBP28.32■■■□□ 2.12
FOXA1-202ENST00000545425 FOXD4L1Q9NU39 408 aa28.32■■■□□ 2.12
FOXA1-202ENST00000545425 LRRFIP2Q9Y608 721 aaKnown RBP28.32■■■□□ 2.12
FOXA1-202ENST00000545425 CHMLP26374 656 aa28.32■■■□□ 2.12
FOXA1-202ENST00000545425 CCDC9Q9Y3X0 531 aaKnown RBP28.32■■■□□ 2.12
FOXA1-202ENST00000545425 CRYBG1Q9Y4K1 1723 aa28.31■■■□□ 2.12
FOXA1-202ENST00000545425 PNMA6EA0A0J9YXQ4 647 aa28.31■■■□□ 2.12
FOXA1-202ENST00000545425 GCP02774 474 aa28.31■■■□□ 2.12
FOXA1-202ENST00000545425 DDX49Q9Y6V7 483 aaKnown RBP28.31■■■□□ 2.12
FOXA1-202ENST00000545425 COL14A1Q05707 1796 aaKnown RBP28.3■■■□□ 2.12
FOXA1-202ENST00000545425 AKAP4Q5JQC9 854 aa28.3■■■□□ 2.12
FOXA1-202ENST00000545425 ZNF445P59923 1031 aa28.29■■■□□ 2.12
FOXA1-202ENST00000545425 EIF4A1P60842 406 aaKnown RBP28.29■■■□□ 2.12
FOXA1-202ENST00000545425 PLCH1Q4KWH8 1693 aa28.29■■■□□ 2.12
FOXA1-202ENST00000545425 CUL4AQ13619 759 aa28.29■■■□□ 2.12
FOXA1-202ENST00000545425 PLEKHO1Q53GL0 409 aaPredicted RBP28.29■■■□□ 2.12
FOXA1-202ENST00000545425 CPDO75976 1380 aa28.28■■■□□ 2.12
FOXA1-202ENST00000545425 KIF1BPQ96EK5 621 aa28.27■■■□□ 2.12
FOXA1-202ENST00000545425 SLIT3O75094 1523 aa28.27■■■□□ 2.12
FOXA1-202ENST00000545425 CLCN1P35523 988 aa28.27■■■□□ 2.12
FOXA1-202ENST00000545425 UPF1Q92900 1129 aaKnown RBP eCLIP28.27■■■□□ 2.12
FOXA1-202ENST00000545425 CHRNA2Q15822 529 aa28.26■■■□□ 2.11
FOXA1-202ENST00000545425 PANK2Q9BZ23 570 aa28.26■■■□□ 2.11
FOXA1-202ENST00000545425 CAMTA1Q9Y6Y1 1673 aa28.25■■■□□ 2.11
FOXA1-202ENST00000545425 ANP32BQ92688 251 aaKnown RBP28.25■■■□□ 2.11
FOXA1-202ENST00000545425 USP42Q9H9J4 1324 aaKnown RBP28.25■■■□□ 2.11
FOXA1-202ENST00000545425 ONECUT3O60422 494 aaPredicted RBP28.25■■■□□ 2.11
FOXA1-202ENST00000545425 CCDC173Q0VFZ6 552 aa28.25■■■□□ 2.11
FOXA1-202ENST00000545425 DNAAF4Q8WXU2 420 aa28.25■■■□□ 2.11
FOXA1-202ENST00000545425 TRIM6-TRIM34B2RNG4 842 aa28.24■■■□□ 2.11
FOXA1-202ENST00000545425 NEK4P51957 841 aa28.24■■■□□ 2.11
FOXA1-202ENST00000545425 LTV1Q96GA3 475 aaPredicted RBP28.24■■■□□ 2.11
FOXA1-202ENST00000545425 LMBRD1Q9NUN5 540 aa28.24■■■□□ 2.11
FOXA1-202ENST00000545425 GLI3P10071 1580 aa28.23■■■□□ 2.11
FOXA1-202ENST00000545425 MTX1Q13505 466 aa28.23■■■□□ 2.11
FOXA1-202ENST00000545425 ALDH1L1O75891 902 aa28.22■■■□□ 2.11
FOXA1-202ENST00000545425 TEFQ10587 303 aa28.22■■■□□ 2.11
FOXA1-202ENST00000545425 MCTP1Q6DN14 999 aa28.22■■■□□ 2.11
FOXA1-202ENST00000545425 TMX3Q96JJ7 454 aa28.22■■■□□ 2.11
FOXA1-202ENST00000545425 RRAGDQ9NQL2 400 aaPredicted RBP28.22■■■□□ 2.11
FOXA1-202ENST00000545425 TTC41PQ6P2S7 1318 aa28.22■■■□□ 2.11
FOXA1-202ENST00000545425 BEND3Q5T5X7 828 aa28.21■■■□□ 2.11
FOXA1-202ENST00000545425 PPP1R42Q7Z4L9 355 aa28.21■■■□□ 2.11
FOXA1-202ENST00000545425 MBD3O95983 291 aa28.2■■■□□ 2.11
FOXA1-202ENST00000545425 NBPF6Q5VWK0 638 aa28.2■■■□□ 2.11
FOXA1-202ENST00000545425 RHPN1Q8TCX5 695 aa28.2■■■□□ 2.11
FOXA1-202ENST00000545425 RILPL2Q969X0 211 aa28.2■■■□□ 2.11
FOXA1-202ENST00000545425 TRIM44Q96DX7 344 aaPredicted RBP28.2■■■□□ 2.11
FOXA1-202ENST00000545425 NBPF4Q96M43 638 aa28.2■■■□□ 2.11
FOXA1-202ENST00000545425 ANO2Q9NQ90 1003 aa28.2■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms