RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 DNAJC10Q8IXB1 793 aa12.93□□□□□ -0.34
TNFRSF1A-214ENST00000543048 TTC5Q8N0Z6 440 aa12.93□□□□□ -0.34
TNFRSF1A-214ENST00000543048 VSIG10Q8N0Z9 540 aa12.93□□□□□ -0.34
TNFRSF1A-214ENST00000543048 KLHL34Q8N239 644 aa12.93□□□□□ -0.34
TNFRSF1A-214ENST00000543048 RTF1Q92541 710 aaKnown RBP12.93□□□□□ -0.34
TNFRSF1A-214ENST00000543048 ARHGEF1Q92888 912 aaKnown RBP12.93□□□□□ -0.34
TNFRSF1A-214ENST00000543048 TJP1Q07157 1748 aa12.93□□□□□ -0.34
TNFRSF1A-214ENST00000543048 RFC4P35249 363 aa12.92□□□□□ -0.34
TNFRSF1A-214ENST00000543048 INTS5Q6P9B9 1019 aaKnown RBP12.92□□□□□ -0.34
TNFRSF1A-214ENST00000543048 CHD4Q14839 1912 aa12.92□□□□□ -0.34
TNFRSF1A-214ENST00000543048 UBR2Q8IWV8 1755 aa12.92□□□□□ -0.34
TNFRSF1A-214ENST00000543048 CICQ96RK0 1608 aaPredicted RBP12.91□□□□□ -0.34
TNFRSF1A-214ENST00000543048 MYBBP1AQ9BQG0 1328 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1A-214ENST00000543048 BTBD11A6QL63 1104 aa12.91□□□□□ -0.34
TNFRSF1A-214ENST00000543048 CYP19A1P11511 503 aaPredicted RBP12.91□□□□□ -0.34
TNFRSF1A-214ENST00000543048 ZNF790Q6PG37 636 aa12.91□□□□□ -0.34
TNFRSF1A-214ENST00000543048 NLGN1Q8N2Q7 840 aa12.91□□□□□ -0.34
TNFRSF1A-214ENST00000543048 PIP4P2Q8N4L2 257 aa12.91□□□□□ -0.34
TNFRSF1A-214ENST00000543048 PLEKHF1Q96S99 279 aa12.91□□□□□ -0.34
TNFRSF1A-214ENST00000543048 TEX13AQ9BXU3 409 aaPredicted RBP12.91□□□□□ -0.34
TNFRSF1A-214ENST00000543048 CEMIPQ8WUJ3 1361 aa12.91□□□□□ -0.34
TNFRSF1A-214ENST00000543048 PRR29P0C7W0 189 aa12.9□□□□□ -0.34
TNFRSF1A-214ENST00000543048 MCM10Q7L590 875 aa12.9□□□□□ -0.34
TNFRSF1A-214ENST00000543048 CCDC87Q9NVE4 849 aa12.9□□□□□ -0.34
TNFRSF1A-214ENST00000543048 CD2APQ9Y5K6 639 aa12.9□□□□□ -0.34
TNFRSF1A-214ENST00000543048 KCPQ6ZWJ8 1503 aa12.89□□□□□ -0.35
TNFRSF1A-214ENST00000543048 STARD3NLO95772 234 aa12.89□□□□□ -0.35
TNFRSF1A-214ENST00000543048 ZNF496Q96IT1 587 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF1A-214ENST00000543048 FMNL2Q96PY5 1086 aa12.89□□□□□ -0.35
TNFRSF1A-214ENST00000543048 GYS1P13807 737 aa12.88□□□□□ -0.35
TNFRSF1A-214ENST00000543048 FXR2P51116 673 aaKnown RBP eCLIP12.88□□□□□ -0.35
TNFRSF1A-214ENST00000543048 DCTN1Q14203 1278 aa12.88□□□□□ -0.35
TNFRSF1A-214ENST00000543048 TAF7Q15545 349 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1A-214ENST00000543048 NFE2L2Q16236 605 aa12.88□□□□□ -0.35
TNFRSF1A-214ENST00000543048 GPR162Q16538 588 aa12.88□□□□□ -0.35
TNFRSF1A-214ENST00000543048 PRKRIP1Q9H875 184 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1A-214ENST00000543048 C4AP0C0L4 1744 aa12.88□□□□□ -0.35
TNFRSF1A-214ENST00000543048 MAPK8IP3Q9UPT6 1336 aa12.88□□□□□ -0.35
TNFRSF1A-214ENST00000543048 HEG1Q9ULI3 1381 aa12.87□□□□□ -0.35
TNFRSF1A-214ENST00000543048 KCNQ3O43525 872 aa12.87□□□□□ -0.35
TNFRSF1A-214ENST00000543048 ZPR1O75312 459 aa12.87□□□□□ -0.35
TNFRSF1A-214ENST00000543048 MMP10P09238 476 aa12.87□□□□□ -0.35
TNFRSF1A-214ENST00000543048 NLGN2Q8NFZ4 835 aa12.87□□□□□ -0.35
TNFRSF1A-214ENST00000543048 ZNF316A6NFI3 1004 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-214ENST00000543048 SRP68Q9UHB9 627 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1A-214ENST00000543048 SOS1Q07889 1333 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-214ENST00000543048 CANXP27824 592 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1A-214ENST00000543048 ZBTB1Q9Y2K1 713 aa12.85□□□□□ -0.35
TNFRSF1A-214ENST00000543048 PARP3Q9Y6F1 533 aa12.85□□□□□ -0.35
TNFRSF1A-214ENST00000543048 USP42Q9H9J4 1324 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1A-214ENST00000543048 A0A087WZG4 1122 aa12.84□□□□□ -0.35
TNFRSF1A-214ENST00000543048 YY1P25490 414 aa12.84□□□□□ -0.35
TNFRSF1A-214ENST00000543048 EIF5P55010 431 aaKnown RBP12.84□□□□□ -0.35
TNFRSF1A-214ENST00000543048 WDR43Q15061 677 aaKnown RBP eCLIP12.84□□□□□ -0.35
TNFRSF1A-214ENST00000543048 PELP1Q8IZL8 1130 aaKnown RBP12.84□□□□□ -0.35
TNFRSF1A-214ENST00000543048 PNISRQ8TF01 805 aaKnown RBP12.84□□□□□ -0.35
TNFRSF1A-214ENST00000543048 MIS18AQ9NYP9 233 aa12.84□□□□□ -0.35
TNFRSF1A-214ENST00000543048 NARFQ9UHQ1 456 aa12.84□□□□□ -0.35
TNFRSF1A-214ENST00000543048 KIF13BQ9NQT8 1826 aa12.83□□□□□ -0.35
TNFRSF1A-214ENST00000543048 A1BGP04217 495 aa12.83□□□□□ -0.36
TNFRSF1A-214ENST00000543048 SNRPA1P09661 255 aaKnown RBP12.83□□□□□ -0.36
TNFRSF1A-214ENST00000543048 TM4SF1P30408 202 aa12.83□□□□□ -0.36
TNFRSF1A-214ENST00000543048 RIPK4P57078 832 aa12.83□□□□□ -0.36
TNFRSF1A-214ENST00000543048 USPL1Q5W0Q7 1092 aa12.83□□□□□ -0.36
TNFRSF1A-214ENST00000543048 USP16Q9Y5T5 823 aa12.83□□□□□ -0.36
TNFRSF1A-214ENST00000543048 GRIN3BO60391 1043 aa12.82□□□□□ -0.36
TNFRSF1A-214ENST00000543048 IL6STP40189 918 aaPredicted RBP12.82□□□□□ -0.36
TNFRSF1A-214ENST00000543048 TMPOP42166 694 aaKnown RBP12.82□□□□□ -0.36
TNFRSF1A-214ENST00000543048 RUNDC1Q96C34 613 aa12.82□□□□□ -0.36
TNFRSF1A-214ENST00000543048 ADAMTS8Q9UP79 889 aa12.82□□□□□ -0.36
TNFRSF1A-214ENST00000543048 UTRNP46939 3433 aa12.82□□□□□ -0.36
TNFRSF1A-214ENST00000543048 COL15A1P39059 1388 aa12.81□□□□□ -0.36
TNFRSF1A-214ENST00000543048 N4BP2Q86UW6 1770 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF1A-214ENST00000543048 TGFB2P61812 414 aa12.81□□□□□ -0.36
TNFRSF1A-214ENST00000543048 NPM2Q86SE8 214 aaKnown RBP12.81□□□□□ -0.36
TNFRSF1A-214ENST00000543048 AFDNP55196 1824 aaKnown RBP12.81□□□□□ -0.36
TNFRSF1A-214ENST00000543048 KDM3BQ7LBC6 1761 aa12.8□□□□□ -0.36
TNFRSF1A-214ENST00000543048 PRAMEF22A3QJZ6 481 aa12.8□□□□□ -0.36
TNFRSF1A-214ENST00000543048 PRKAR2AP13861 404 aaKnown RBP12.8□□□□□ -0.36
TNFRSF1A-214ENST00000543048 LMOD3Q0VAK6 560 aa12.8□□□□□ -0.36
TNFRSF1A-214ENST00000543048 CCDC146Q8IYE0 955 aa12.8□□□□□ -0.36
TNFRSF1A-214ENST00000543048 THUMPD2Q9BTF0 503 aaKnown RBP12.8□□□□□ -0.36
TNFRSF1A-214ENST00000543048 GOLGB1Q14789 3259 aaKnown RBP12.8□□□□□ -0.36
TNFRSF1A-214ENST00000543048 YBX3P16989 372 aaKnown RBP eCLIP12.79□□□□□ -0.36
TNFRSF1A-214ENST00000543048 DDR1Q08345 913 aa12.79□□□□□ -0.36
TNFRSF1A-214ENST00000543048 NEUROD2Q15784 382 aa12.79□□□□□ -0.36
TNFRSF1A-214ENST00000543048 BCL2L12Q9HB09 334 aa12.79□□□□□ -0.36
TNFRSF1A-214ENST00000543048 TBC1D2BQ9UPU7 963 aa12.79□□□□□ -0.36
TNFRSF1A-214ENST00000543048 ZNF330Q9Y3S2 320 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF1A-214ENST00000543048 A0A0G2JLW4 131 aa12.78□□□□□ -0.36
TNFRSF1A-214ENST00000543048 POLRMTO00411 1230 aaKnown RBP12.78□□□□□ -0.36
TNFRSF1A-214ENST00000543048 EIF4A1P60842 406 aaKnown RBP12.78□□□□□ -0.36
TNFRSF1A-214ENST00000543048 NFIXQ14938 502 aa12.78□□□□□ -0.36
TNFRSF1A-214ENST00000543048 CHADLQ6NUI6 762 aa12.78□□□□□ -0.36
TNFRSF1A-214ENST00000543048 BABAM1Q9NWV8 329 aa12.78□□□□□ -0.36
TNFRSF1A-214ENST00000543048 RRP7AQ9Y3A4 280 aaKnown RBP12.78□□□□□ -0.36
TNFRSF1A-214ENST00000543048 GIGYF1O75420 1035 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF1A-214ENST00000543048 NBPF26B4DH59 902 aa12.76□□□□□ -0.37
TNFRSF1A-214ENST00000543048 SERPINB2P05120 415 aa12.76□□□□□ -0.37
TNFRSF1A-214ENST00000543048 DPEP1P16444 411 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms