RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 DNAJC10Q8IXB1 793 aa7.58□□□□□ -1.2
ABCF1-207ENST00000542772 TAF1LQ8IZX4 1826 aa7.57□□□□□ -1.2
ABCF1-207ENST00000542772 ERBB4Q15303 1308 aa7.57□□□□□ -1.2
ABCF1-207ENST00000542772 CACNA1FO60840 1977 aa7.57□□□□□ -1.2
ABCF1-207ENST00000542772 RARSP54136 660 aaKnown RBP7.57□□□□□ -1.2
ABCF1-207ENST00000542772 EZH2Q15910 746 aaKnown RBP7.57□□□□□ -1.2
ABCF1-207ENST00000542772 CCDC30Q5VVM6 783 aa7.57□□□□□ -1.2
ABCF1-207ENST00000542772 DDX21Q9NR30 783 aaKnown RBP eCLIP7.57□□□□□ -1.2
ABCF1-207ENST00000542772 CCNL1Q9UK58 526 aaPredicted RBP7.57□□□□□ -1.2
ABCF1-207ENST00000542772 MYH14Q7Z406 1995 aaKnown RBP7.57□□□□□ -1.2
ABCF1-207ENST00000542772 CNTNAP4Q9C0A0 1308 aa7.56□□□□□ -1.2
ABCF1-207ENST00000542772 TJP1Q07157 1748 aa7.56□□□□□ -1.2
ABCF1-207ENST00000542772 NBPF26B4DH59 902 aa7.56□□□□□ -1.2
ABCF1-207ENST00000542772 RPS6KA4O75676 772 aa7.56□□□□□ -1.2
ABCF1-207ENST00000542772 A1BGP04217 495 aa7.56□□□□□ -1.2
ABCF1-207ENST00000542772 IL6STP40189 918 aaPredicted RBP7.56□□□□□ -1.2
ABCF1-207ENST00000542772 EIF5P55010 431 aaKnown RBP7.56□□□□□ -1.2
ABCF1-207ENST00000542772 NBPF14Q5TI25 921 aa7.56□□□□□ -1.2
ABCF1-207ENST00000542772 NBPF10Q6P3W6 841 aaKnown RBP7.56□□□□□ -1.2
ABCF1-207ENST00000542772 DEFB132Q7Z7B7 95 aa7.56□□□□□ -1.2
ABCF1-207ENST00000542772 NBPF15Q8N660 670 aa7.56□□□□□ -1.2
ABCF1-207ENST00000542772 LINC00116Q8NCU8 138 aa7.56□□□□□ -1.2
ABCF1-207ENST00000542772 AKT1S1Q96B36 256 aa7.56□□□□□ -1.2
ABCF1-207ENST00000542772 DBF4Q9UBU7 674 aaPredicted RBP7.56□□□□□ -1.2
ABCF1-207ENST00000542772 COL5A3P25940 1745 aaPredicted RBP7.55□□□□□ -1.2
ABCF1-207ENST00000542772 RREB1Q92766 1687 aa7.55□□□□□ -1.2
ABCF1-207ENST00000542772 SLC4A2P04920 1241 aa7.55□□□□□ -1.2
ABCF1-207ENST00000542772 EIF2S2P20042 333 aaKnown RBP7.55□□□□□ -1.2
ABCF1-207ENST00000542772 CRKLP46109 303 aaKnown RBP7.55□□□□□ -1.2
ABCF1-207ENST00000542772 KCNQ4P56696 695 aa7.55□□□□□ -1.2
ABCF1-207ENST00000542772 HDGFL1Q5TGJ6 251 aa7.55□□□□□ -1.2
ABCF1-207ENST00000542772 MRPL50Q8N5N7 158 aaKnown RBP7.55□□□□□ -1.2
ABCF1-207ENST00000542772 SSH1Q8WYL5 1049 aa7.55□□□□□ -1.2
ABCF1-207ENST00000542772 CCDC87Q9NVE4 849 aa7.55□□□□□ -1.2
ABCF1-207ENST00000542772 HYPKQ9NX55 129 aa7.55□□□□□ -1.2
ABCF1-207ENST00000542772 C5P01031 1676 aa7.54□□□□□ -1.2
ABCF1-207ENST00000542772 RGL2O15211 777 aa7.54□□□□□ -1.2
ABCF1-207ENST00000542772 ARHGAP45Q92619 1136 aa7.54□□□□□ -1.2
ABCF1-207ENST00000542772 LAMB4A4D0S4 1761 aa7.54□□□□□ -1.2
ABCF1-207ENST00000542772 ADRA2BP18089 450 aa7.53□□□□□ -1.2
ABCF1-207ENST00000542772 SLC15A2Q16348 729 aa7.53□□□□□ -1.2
ABCF1-207ENST00000542772 FLAD1Q8NFF5 587 aa7.53□□□□□ -1.2
ABCF1-207ENST00000542772 STK31Q9BXU1 1019 aa7.53□□□□□ -1.2
ABCF1-207ENST00000542772 PHAXQ9H814 394 aaKnown RBP7.53□□□□□ -1.2
ABCF1-207ENST00000542772 CHPF2Q9P2E5 772 aa7.53□□□□□ -1.2
ABCF1-207ENST00000542772 RCAN3Q9UKA8 241 aa7.53□□□□□ -1.2
ABCF1-207ENST00000542772 ZBTB1Q9Y2K1 713 aa7.53□□□□□ -1.2
ABCF1-207ENST00000542772 RNF123Q5XPI4 1314 aa7.52□□□□□ -1.2
ABCF1-207ENST00000542772 C4BP0C0L5 1744 aa7.52□□□□□ -1.2
ABCF1-207ENST00000542772 A0A087WZG4 1122 aa7.52□□□□□ -1.21
ABCF1-207ENST00000542772 ERVV-1B6SEH8 477 aa7.52□□□□□ -1.21
ABCF1-207ENST00000542772 BCAR3O75815 825 aa7.52□□□□□ -1.21
ABCF1-207ENST00000542772 CANXP27824 592 aaKnown RBP7.52□□□□□ -1.21
ABCF1-207ENST00000542772 SSFA2P28290 1259 aa7.52□□□□□ -1.21
ABCF1-207ENST00000542772 PROSER3Q2NL68 480 aa7.52□□□□□ -1.21
ABCF1-207ENST00000542772 TRAPPC3LQ5T215 181 aa7.52□□□□□ -1.21
ABCF1-207ENST00000542772 COPS6Q7L5N1 327 aa7.52□□□□□ -1.21
ABCF1-207ENST00000542772 G2E3Q7L622 706 aa7.52□□□□□ -1.21
ABCF1-207ENST00000542772 AMIGO3Q86WK7 504 aa7.52□□□□□ -1.21
ABCF1-207ENST00000542772 NECTIN2Q92692 538 aa7.52□□□□□ -1.21
ABCF1-207ENST00000542772 ARHGEF1Q92888 912 aaKnown RBP7.52□□□□□ -1.21
ABCF1-207ENST00000542772 RTCBQ9Y3I0 505 aaKnown RBP7.52□□□□□ -1.21
ABCF1-207ENST00000542772 UBR3Q6ZT12 1888 aa7.51□□□□□ -1.21
ABCF1-207ENST00000542772 SOCS7O14512 581 aa7.51□□□□□ -1.21
ABCF1-207ENST00000542772 TCERG1O14776 1098 aaKnown RBP7.51□□□□□ -1.21
ABCF1-207ENST00000542772 ANXA1P04083 346 aa7.51□□□□□ -1.21
ABCF1-207ENST00000542772 MYL6BP14649 208 aa7.51□□□□□ -1.21
ABCF1-207ENST00000542772 PIP4K2AP48426 406 aaPredicted RBP7.51□□□□□ -1.21
ABCF1-207ENST00000542772 FLIIQ13045 1269 aa7.51□□□□□ -1.21
ABCF1-207ENST00000542772 ZNF827Q17R98 1081 aa7.51□□□□□ -1.21
ABCF1-207ENST00000542772 CLEC4GQ6UXB4 293 aa7.51□□□□□ -1.21
ABCF1-207ENST00000542772 KSR2Q6VAB6 950 aa7.51□□□□□ -1.21
ABCF1-207ENST00000542772 TTLL7Q6ZT98 887 aa7.51□□□□□ -1.21
ABCF1-207ENST00000542772 ANKRD13DQ6ZTN6 518 aa7.51□□□□□ -1.21
ABCF1-207ENST00000542772 PLBD2Q8NHP8 589 aa7.51□□□□□ -1.21
ABCF1-207ENST00000542772 NARFQ9UHQ1 456 aa7.51□□□□□ -1.21
ABCF1-207ENST00000542772 NOB1Q9ULX3 412 aaKnown RBP7.51□□□□□ -1.21
ABCF1-207ENST00000542772 PTPRCP08575 1304 aa7.51□□□□□ -1.21
ABCF1-207ENST00000542772 QSER1Q2KHR3 1735 aa7.5□□□□□ -1.21
ABCF1-207ENST00000542772 NUP188Q5SRE5 1749 aa7.5□□□□□ -1.21
ABCF1-207ENST00000542772 GNPATO15228 680 aa7.5□□□□□ -1.21
ABCF1-207ENST00000542772 IPO8O15397 1037 aaKnown RBP7.5□□□□□ -1.21
ABCF1-207ENST00000542772 TRIM28Q13263 835 aaKnown RBP7.5□□□□□ -1.21
ABCF1-207ENST00000542772 GIGYF2Q6Y7W6 1299 aaKnown RBP7.5□□□□□ -1.21
ABCF1-207ENST00000542772 COL23A1Q86Y22 540 aaPredicted RBP7.5□□□□□ -1.21
ABCF1-207ENST00000542772 XAGE3Q8WTP9 111 aa7.5□□□□□ -1.21
ABCF1-207ENST00000542772 AK7Q96M32 723 aa7.5□□□□□ -1.21
ABCF1-207ENST00000542772 ANO8Q9HCE9 1232 aaPredicted RBP7.5□□□□□ -1.21
ABCF1-207ENST00000542772 SMC4Q9NTJ3 1288 aa7.5□□□□□ -1.21
ABCF1-207ENST00000542772 STK32BQ9NY57 414 aa7.5□□□□□ -1.21
ABCF1-207ENST00000542772 MAP3K15Q6ZN16 1313 aa7.5□□□□□ -1.21
ABCF1-207ENST00000542772 IBTKQ9P2D0 1353 aaPredicted RBP7.49□□□□□ -1.21
ABCF1-207ENST00000542772 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.49□□□□□ -1.21
ABCF1-207ENST00000542772 PI4KAP2A4QPH2 592 aa7.49□□□□□ -1.21
ABCF1-207ENST00000542772 CAMTA2O94983 1202 aa7.49□□□□□ -1.21
ABCF1-207ENST00000542772 DDX58O95786 925 aaKnown RBP7.49□□□□□ -1.21
ABCF1-207ENST00000542772 TM4SF1P30408 202 aa7.49□□□□□ -1.21
ABCF1-207ENST00000542772 AIMP1Q12904 312 aaKnown RBP7.49□□□□□ -1.21
ABCF1-207ENST00000542772 PDE3AQ14432 1141 aa7.49□□□□□ -1.21
ABCF1-207ENST00000542772 ATF7IPQ6VMQ6 1270 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms