RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 DDX11Q96FC9 970 aa9.71□□□□□ -0.85
PRKAB1-207ENST00000542698 FOXO3O43524 673 aa9.71□□□□□ -0.86
PRKAB1-207ENST00000542698 OFD1O75665 1012 aa9.71□□□□□ -0.86
PRKAB1-207ENST00000542698 ZSCAN22P10073 491 aaPredicted RBP9.71□□□□□ -0.86
PRKAB1-207ENST00000542698 CHMLP26374 656 aa9.71□□□□□ -0.86
PRKAB1-207ENST00000542698 RASSF8Q8NHQ8 419 aa9.71□□□□□ -0.86
PRKAB1-207ENST00000542698 MPRIPQ6WCQ1 1025 aa9.71□□□□□ -0.86
PRKAB1-207ENST00000542698 FILIP1Q7Z7B0 1213 aa9.71□□□□□ -0.86
PRKAB1-207ENST00000542698 EVI5LQ96CN4 794 aa9.71□□□□□ -0.86
PRKAB1-207ENST00000542698 TFIP11Q9UBB9 837 aaKnown RBP9.71□□□□□ -0.86
PRKAB1-207ENST00000542698 FSD2A1L4K1 749 aa9.7□□□□□ -0.86
PRKAB1-207ENST00000542698 KCNH5Q8NCM2 988 aa9.7□□□□□ -0.86
PRKAB1-207ENST00000542698 PIK3R4Q99570 1358 aa9.7□□□□□ -0.86
PRKAB1-207ENST00000542698 ABCC1P33527 1531 aa9.7□□□□□ -0.86
PRKAB1-207ENST00000542698 SMC2O95347 1197 aa9.7□□□□□ -0.86
PRKAB1-207ENST00000542698 ANXA1P04083 346 aa9.7□□□□□ -0.86
PRKAB1-207ENST00000542698 TATP17735 454 aaPredicted RBP9.7□□□□□ -0.86
PRKAB1-207ENST00000542698 ZNF445P59923 1031 aa9.7□□□□□ -0.86
PRKAB1-207ENST00000542698 SAFBQ15424 915 aaKnown RBP eCLIP9.7□□□□□ -0.86
PRKAB1-207ENST00000542698 LARP1Q6PKG0 1096 aaKnown RBP9.7□□□□□ -0.86
PRKAB1-207ENST00000542698 G2E3Q7L622 706 aa9.7□□□□□ -0.86
PRKAB1-207ENST00000542698 RBSNQ9H1K0 784 aa9.7□□□□□ -0.86
PRKAB1-207ENST00000542698 GIMAP6Q6P9H5 292 aa9.7□□□□□ -0.86
PRKAB1-207ENST00000542698 CKAP2LQ8IYA6 745 aa9.7□□□□□ -0.86
PRKAB1-207ENST00000542698 MNS1Q8NEH6 495 aa9.7□□□□□ -0.86
PRKAB1-207ENST00000542698 DYNC1I1O14576 645 aa9.69□□□□□ -0.86
PRKAB1-207ENST00000542698 TPM1P09493 284 aa9.69□□□□□ -0.86
PRKAB1-207ENST00000542698 EVA1CP58658 441 aa9.69□□□□□ -0.86
PRKAB1-207ENST00000542698 ABCC4O15439 1325 aa9.69□□□□□ -0.86
PRKAB1-207ENST00000542698 GSPT1P15170 499 aaKnown RBP9.69□□□□□ -0.86
PRKAB1-207ENST00000542698 AMOTQ4VCS5 1084 aa9.69□□□□□ -0.86
PRKAB1-207ENST00000542698 GAS2L3Q86XJ1 694 aa9.69□□□□□ -0.86
PRKAB1-207ENST00000542698 CNPY2Q9Y2B0 182 aa9.69□□□□□ -0.86
PRKAB1-207ENST00000542698 LMBRD1Q9NUN5 540 aa9.69□□□□□ -0.86
PRKAB1-207ENST00000542698 TRPM1Q7Z4N2 1603 aa9.69□□□□□ -0.86
PRKAB1-207ENST00000542698 PES1O00541 588 aaKnown RBP9.68□□□□□ -0.86
PRKAB1-207ENST00000542698 OLFM4Q6UX06 510 aa9.68□□□□□ -0.86
PRKAB1-207ENST00000542698 ZNF830Q96NB3 372 aaPredicted RBP9.68□□□□□ -0.86
PRKAB1-207ENST00000542698 ARGLU1Q9NWB6 273 aaPredicted RBP9.68□□□□□ -0.86
PRKAB1-207ENST00000542698 TRPM2O94759 1503 aa9.68□□□□□ -0.86
PRKAB1-207ENST00000542698 CCDC158Q5M9N0 1113 aa9.68□□□□□ -0.86
PRKAB1-207ENST00000542698 CEP57L1Q8IYX8 460 aa9.68□□□□□ -0.86
PRKAB1-207ENST00000542698 PDCL2Q8N4E4 241 aa9.68□□□□□ -0.86
PRKAB1-207ENST00000542698 TTC21AQ8NDW8 1320 aa9.68□□□□□ -0.86
PRKAB1-207ENST00000542698 BRPF1P55201 1214 aaPredicted RBP9.68□□□□□ -0.86
PRKAB1-207ENST00000542698 TSR1Q2NL82 804 aaKnown RBP9.68□□□□□ -0.86
PRKAB1-207ENST00000542698 EYA1Q99502 592 aa9.68□□□□□ -0.86
PRKAB1-207ENST00000542698 HYPKQ9NX55 129 aa9.68□□□□□ -0.86
PRKAB1-207ENST00000542698 NOL7Q9UMY1 257 aaKnown RBP9.68□□□□□ -0.86
PRKAB1-207ENST00000542698 MAP3K2Q9Y2U5 619 aa9.68□□□□□ -0.86
PRKAB1-207ENST00000542698 RIMS2Q9UQ26 1411 aa9.68□□□□□ -0.86
PRKAB1-207ENST00000542698 MSH6P52701 1360 aa9.68□□□□□ -0.86
PRKAB1-207ENST00000542698 UNC13BO14795 1591 aa9.68□□□□□ -0.86
PRKAB1-207ENST00000542698 ATF3P18847 181 aa9.67□□□□□ -0.86
PRKAB1-207ENST00000542698 TNNT3P45378 269 aaPredicted RBP9.67□□□□□ -0.86
PRKAB1-207ENST00000542698 NECAB1Q8N987 351 aa9.67□□□□□ -0.86
PRKAB1-207ENST00000542698 DDX19AQ9NUU7 478 aaKnown RBP9.67□□□□□ -0.86
PRKAB1-207ENST00000542698 PHF8Q9UPP1 1060 aa9.67□□□□□ -0.86
PRKAB1-207ENST00000542698 ERICH2A1L162 156 aa9.67□□□□□ -0.86
PRKAB1-207ENST00000542698 GTF2E1P29083 439 aaPredicted RBP9.67□□□□□ -0.86
PRKAB1-207ENST00000542698 FKBP4Q02790 459 aaKnown RBP eCLIP9.67□□□□□ -0.86
PRKAB1-207ENST00000542698 NOLC1Q14978 699 aaKnown RBP eCLIP9.67□□□□□ -0.86
PRKAB1-207ENST00000542698 GOLGA6L1Q8N7Z2 621 aa9.67□□□□□ -0.86
PRKAB1-207ENST00000542698 CEP126Q9P2H0 1117 aa9.67□□□□□ -0.86
PRKAB1-207ENST00000542698 ZNF165P49910 485 aa9.67□□□□□ -0.86
PRKAB1-207ENST00000542698 TEX35Q5T0J7 233 aa9.67□□□□□ -0.86
PRKAB1-207ENST00000542698 JMYQ8N9B5 988 aa9.67□□□□□ -0.86
PRKAB1-207ENST00000542698 PRIMPOLQ96LW4 560 aa9.67□□□□□ -0.86
PRKAB1-207ENST00000542698 TTC12Q9H892 705 aaPredicted RBP9.67□□□□□ -0.86
PRKAB1-207ENST00000542698 CHPF2Q9P2E5 772 aa9.67□□□□□ -0.86
PRKAB1-207ENST00000542698 HECW2Q9P2P5 1572 aa9.67□□□□□ -0.86
PRKAB1-207ENST00000542698 MYO5CQ9NQX4 1742 aa9.67□□□□□ -0.86
PRKAB1-207ENST00000542698 PLXNC1O60486 1568 aa9.66□□□□□ -0.86
PRKAB1-207ENST00000542698 CABP4P57796 275 aa9.66□□□□□ -0.86
PRKAB1-207ENST00000542698 ZC3H6P61129 1189 aaKnown RBP9.66□□□□□ -0.86
PRKAB1-207ENST00000542698 GPS2Q13227 327 aa9.66□□□□□ -0.86
PRKAB1-207ENST00000542698 MYOM2P54296 1465 aa9.66□□□□□ -0.86
PRKAB1-207ENST00000542698 SOS1Q07889 1333 aaPredicted RBP9.66□□□□□ -0.86
PRKAB1-207ENST00000542698 MAP3K19Q56UN5 1328 aa9.66□□□□□ -0.86
PRKAB1-207ENST00000542698 CD2BP2O95400 341 aaKnown RBP9.66□□□□□ -0.86
PRKAB1-207ENST00000542698 F13A1P00488 732 aa9.66□□□□□ -0.86
PRKAB1-207ENST00000542698 CEBPAP49715 358 aaPredicted RBP9.66□□□□□ -0.86
PRKAB1-207ENST00000542698 AK2P54819 239 aa9.66□□□□□ -0.86
PRKAB1-207ENST00000542698 DNM1Q05193 864 aaKnown RBP9.66□□□□□ -0.86
PRKAB1-207ENST00000542698 CTNNA3Q9UI47 895 aa9.66□□□□□ -0.86
PRKAB1-207ENST00000542698 EDC4Q6P2E9 1401 aaKnown RBP9.66□□□□□ -0.86
PRKAB1-207ENST00000542698 KDM4AO75164 1064 aa9.66□□□□□ -0.86
PRKAB1-207ENST00000542698 PROSER2Q86WR7 435 aaPredicted RBP9.66□□□□□ -0.86
PRKAB1-207ENST00000542698 ANKLE2Q86XL3 938 aa9.66□□□□□ -0.86
PRKAB1-207ENST00000542698 PDILTQ8N807 584 aa9.66□□□□□ -0.86
PRKAB1-207ENST00000542698 U3KPZ7 1027 aaPredicted RBP9.66□□□□□ -0.86
PRKAB1-207ENST00000542698 TULP1O00294 542 aaPredicted RBP9.66□□□□□ -0.86
PRKAB1-207ENST00000542698 SYT1P21579 422 aa9.66□□□□□ -0.86
PRKAB1-207ENST00000542698 TCEANC2Q96MN5 208 aa9.66□□□□□ -0.86
PRKAB1-207ENST00000542698 UGGT1Q9NYU2 1555 aa9.65□□□□□ -0.86
PRKAB1-207ENST00000542698 ATP2B1P20020 1258 aa9.65□□□□□ -0.86
PRKAB1-207ENST00000542698 DHX8Q14562 1220 aaKnown RBP9.65□□□□□ -0.86
PRKAB1-207ENST00000542698 ANKRD20A12PQ8NF67 263 aa9.65□□□□□ -0.86
PRKAB1-207ENST00000542698 MYD88Q99836 296 aa9.65□□□□□ -0.86
PRKAB1-207ENST00000542698 ZMYND15Q9H091 742 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms