RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 TPM2P07951 284 aa17.21■□□□□ 0.35
GCFC2-211ENST00000541687 TRIM29Q14134 588 aa17.21■□□□□ 0.35
GCFC2-211ENST00000541687 CWF19L2Q2TBE0 894 aaKnown RBP17.21■□□□□ 0.35
GCFC2-211ENST00000541687 KINO60870 393 aaKnown RBP17.21■□□□□ 0.35
GCFC2-211ENST00000541687 CKAP2LQ8IYA6 745 aa17.21■□□□□ 0.35
GCFC2-211ENST00000541687 STX6O43752 255 aa17.2■□□□□ 0.34
GCFC2-211ENST00000541687 GJB2P29033 226 aa17.2■□□□□ 0.34
GCFC2-211ENST00000541687 IQGAP3Q86VI3 1631 aa17.2■□□□□ 0.34
GCFC2-211ENST00000541687 ME1P48163 572 aa17.2■□□□□ 0.34
GCFC2-211ENST00000541687 NOC3LQ8WTT2 800 aaKnown RBP17.2■□□□□ 0.34
GCFC2-211ENST00000541687 ZSCAN31Q96LW9 406 aaPredicted RBP17.2■□□□□ 0.34
GCFC2-211ENST00000541687 NUP62CLQ9H1M0 184 aa17.2■□□□□ 0.34
GCFC2-211ENST00000541687 CLTCL1P53675 1640 aa17.2■□□□□ 0.34
GCFC2-211ENST00000541687 FLT4P35916 1363 aa17.2■□□□□ 0.34
GCFC2-211ENST00000541687 CHMLP26374 656 aa17.2■□□□□ 0.34
GCFC2-211ENST00000541687 ANKRD1Q15327 319 aa17.2■□□□□ 0.34
GCFC2-211ENST00000541687 HCLS1P14317 486 aaPredicted RBP17.19■□□□□ 0.34
GCFC2-211ENST00000541687 KCNA6P17658 529 aa17.19■□□□□ 0.34
GCFC2-211ENST00000541687 GUCY1B3Q02153 619 aa17.19■□□□□ 0.34
GCFC2-211ENST00000541687 PKP1Q13835 747 aa17.19■□□□□ 0.34
GCFC2-211ENST00000541687 LARP1Q6PKG0 1096 aaKnown RBP17.19■□□□□ 0.34
GCFC2-211ENST00000541687 CNPY2Q9Y2B0 182 aa17.19■□□□□ 0.34
GCFC2-211ENST00000541687 EDC4Q6P2E9 1401 aaKnown RBP17.19■□□□□ 0.34
GCFC2-211ENST00000541687 MYOM2P54296 1465 aa17.19■□□□□ 0.34
GCFC2-211ENST00000541687 UBE3BQ7Z3V4 1068 aa17.19■□□□□ 0.34
GCFC2-211ENST00000541687 ZNF830Q96NB3 372 aaPredicted RBP17.19■□□□□ 0.34
GCFC2-211ENST00000541687 ZFYVE16Q7Z3T8 1539 aa17.19■□□□□ 0.34
GCFC2-211ENST00000541687 PES1O00541 588 aaKnown RBP17.18■□□□□ 0.34
GCFC2-211ENST00000541687 PRDM11Q9NQV5 511 aa17.18■□□□□ 0.34
GCFC2-211ENST00000541687 ABCC4O15439 1325 aa17.18■□□□□ 0.34
GCFC2-211ENST00000541687 ZCCHC11Q5TAX3 1644 aaKnown RBP17.18■□□□□ 0.34
GCFC2-211ENST00000541687 CHRNA2Q15822 529 aa17.18■□□□□ 0.34
GCFC2-211ENST00000541687 HOMER1Q86YM7 354 aa17.18■□□□□ 0.34
GCFC2-211ENST00000541687 TTC21AQ8NDW8 1320 aa17.18■□□□□ 0.34
GCFC2-211ENST00000541687 A0A087WZG4 1122 aa17.18■□□□□ 0.34
GCFC2-211ENST00000541687 CLCN1P35523 988 aa17.18■□□□□ 0.34
GCFC2-211ENST00000541687 AKAP17AQ02040 695 aaKnown RBP17.18■□□□□ 0.34
GCFC2-211ENST00000541687 AMOTQ4VCS5 1084 aa17.18■□□□□ 0.34
GCFC2-211ENST00000541687 GIMAP6Q6P9H5 292 aa17.18■□□□□ 0.34
GCFC2-211ENST00000541687 SIRT2Q8IXJ6 389 aa17.18■□□□□ 0.34
GCFC2-211ENST00000541687 ANTXR1Q9H6X2 564 aa17.18■□□□□ 0.34
GCFC2-211ENST00000541687 ANKRD24Q8TF21 1146 aa17.17■□□□□ 0.34
GCFC2-211ENST00000541687 RRP12Q5JTH9 1297 aaKnown RBP17.17■□□□□ 0.34
GCFC2-211ENST00000541687 USP48Q86UV5 1035 aa17.17■□□□□ 0.34
GCFC2-211ENST00000541687 TTC39AQ5SRH9 613 aa17.17■□□□□ 0.34
GCFC2-211ENST00000541687 STK38Q15208 465 aa17.17■□□□□ 0.34
GCFC2-211ENST00000541687 TPD52L1Q16890 204 aaPredicted RBP17.17■□□□□ 0.34
GCFC2-211ENST00000541687 CCDC183Q5T5S1 534 aa17.17■□□□□ 0.34
GCFC2-211ENST00000541687 HOXC9P31274 260 aa17.16■□□□□ 0.34
GCFC2-211ENST00000541687 CHMP4CQ96CF2 233 aa17.16■□□□□ 0.34
GCFC2-211ENST00000541687 LRRC2Q9BYS8 371 aa17.16■□□□□ 0.34
GCFC2-211ENST00000541687 SHROOM2Q13796 1616 aa17.16■□□□□ 0.34
GCFC2-211ENST00000541687 ZNF771Q7L3S4 317 aaPredicted RBP17.16■□□□□ 0.34
GCFC2-211ENST00000541687 GOLGA6L1Q8N7Z2 621 aa17.16■□□□□ 0.34
GCFC2-211ENST00000541687 LGR6Q9HBX8 967 aa17.16■□□□□ 0.34
GCFC2-211ENST00000541687 CCDC57Q2TAC2 916 aa17.15■□□□□ 0.34
GCFC2-211ENST00000541687 CCDC158Q5M9N0 1113 aa17.15■□□□□ 0.34
GCFC2-211ENST00000541687 FILIP1Q7Z7B0 1213 aa17.15■□□□□ 0.34
GCFC2-211ENST00000541687 CEP126Q9P2H0 1117 aa17.15■□□□□ 0.34
GCFC2-211ENST00000541687 ZBTB3Q9H5J0 574 aa17.15■□□□□ 0.34
GCFC2-211ENST00000541687 CNNM1Q9NRU3 951 aa17.15■□□□□ 0.34
GCFC2-211ENST00000541687 CCT2P78371 535 aaKnown RBP17.15■□□□□ 0.34
GCFC2-211ENST00000541687 LRSAM1Q6UWE0 723 aa17.15■□□□□ 0.34
GCFC2-211ENST00000541687 EVI5LQ96CN4 794 aa17.15■□□□□ 0.34
GCFC2-211ENST00000541687 HYPKQ9NX55 129 aa17.15■□□□□ 0.34
GCFC2-211ENST00000541687 NBPF7P0C2Y1 421 aaPredicted RBP17.15■□□□□ 0.34
GCFC2-211ENST00000541687 MAP3K11Q16584 847 aa17.15■□□□□ 0.34
GCFC2-211ENST00000541687 CCDC34Q96HJ3 373 aa17.15■□□□□ 0.34
GCFC2-211ENST00000541687 METP08581 1390 aa17.15■□□□□ 0.34
GCFC2-211ENST00000541687 SMC2O95347 1197 aa17.14■□□□□ 0.33
GCFC2-211ENST00000541687 SNRKQ9NRH2 765 aa17.14■□□□□ 0.33
GCFC2-211ENST00000541687 UNC13BO14795 1591 aa17.14■□□□□ 0.33
GCFC2-211ENST00000541687 PLXNC1O60486 1568 aa17.14■□□□□ 0.33
GCFC2-211ENST00000541687 AK2P54819 239 aa17.14■□□□□ 0.33
GCFC2-211ENST00000541687 DDX46Q7L014 1031 aaKnown RBP17.14■□□□□ 0.33
GCFC2-211ENST00000541687 COPS6Q7L5N1 327 aa17.14■□□□□ 0.33
GCFC2-211ENST00000541687 SOS1Q07889 1333 aaPredicted RBP17.13■□□□□ 0.33
GCFC2-211ENST00000541687 LTKP29376 864 aa17.13■□□□□ 0.33
GCFC2-211ENST00000541687 GAS2L3Q86XJ1 694 aa17.13■□□□□ 0.33
GCFC2-211ENST00000541687 PHF23Q9BUL5 403 aaPredicted RBP17.13■□□□□ 0.33
GCFC2-211ENST00000541687 KRT28Q7Z3Y7 464 aa17.13■□□□□ 0.33
GCFC2-211ENST00000541687 VPS37DQ86XT2 251 aa17.13■□□□□ 0.33
GCFC2-211ENST00000541687 XAGE3Q8WTP9 111 aa17.13■□□□□ 0.33
GCFC2-211ENST00000541687 RBSNQ9H1K0 784 aa17.13■□□□□ 0.33
GCFC2-211ENST00000541687 RBM8AQ9Y5S9 174 aaKnown RBP17.13■□□□□ 0.33
GCFC2-211ENST00000541687 ZSCAN22P10073 491 aaPredicted RBP17.12■□□□□ 0.33
GCFC2-211ENST00000541687 DNM1Q05193 864 aaKnown RBP17.12■□□□□ 0.33
GCFC2-211ENST00000541687 SH2B1Q9NRF2 756 aaPredicted RBP17.12■□□□□ 0.33
GCFC2-211ENST00000541687 ADCY5O95622 1261 aa17.12■□□□□ 0.33
GCFC2-211ENST00000541687 RAB11FIP4Q86YS3 637 aa17.12■□□□□ 0.33
GCFC2-211ENST00000541687 KLHDC4Q8TBB5 520 aa17.12■□□□□ 0.33
GCFC2-211ENST00000541687 GOLIM4O00461 696 aa17.12■□□□□ 0.33
GCFC2-211ENST00000541687 TPM3P06753 285 aa17.12■□□□□ 0.33
GCFC2-211ENST00000541687 MTMR7Q9Y216 660 aa17.12■□□□□ 0.33
GCFC2-211ENST00000541687 RTL1A6NKG5 1358 aa17.11■□□□□ 0.33
GCFC2-211ENST00000541687 KRT32Q14532 448 aa17.11■□□□□ 0.33
GCFC2-211ENST00000541687 GRM8O00222 908 aa17.11■□□□□ 0.33
GCFC2-211ENST00000541687 ANAPC15P60006 121 aa17.11■□□□□ 0.33
GCFC2-211ENST00000541687 PALD1Q9ULE6 856 aa17.11■□□□□ 0.33
GCFC2-211ENST00000541687 MAP3K5Q99683 1374 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms