RNA–Protein interactions for RNA: ENST00000540875.1

AC090023.2-201, humanhuman

TSL 3 BASIC

Gene AC090023.2, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090023.2-201ENST00000540875 HSP90AB1P08238 724 aaKnown RBP6.35□□□□□ -1.39
AC090023.2-201ENST00000540875 CALRP27797 417 aaKnown RBP6.35□□□□□ -1.39
AC090023.2-201ENST00000540875 MCM4P33991 863 aa6.35□□□□□ -1.39
AC090023.2-201ENST00000540875 SATB1Q01826 763 aa6.35□□□□□ -1.39
AC090023.2-201ENST00000540875 EGFL6Q8IUX8 553 aa6.35□□□□□ -1.39
AC090023.2-201ENST00000540875 MYRIPQ8NFW9 859 aa6.35□□□□□ -1.39
AC090023.2-201ENST00000540875 FAM174AQ8TBP5 190 aa6.35□□□□□ -1.39
AC090023.2-201ENST00000540875 ANTXR1Q9H6X2 564 aa6.35□□□□□ -1.39
AC090023.2-201ENST00000540875 CGNQ9P2M7 1197 aaKnown RBP6.35□□□□□ -1.39
AC090023.2-201ENST00000540875 ZNF330Q9Y3S2 320 aaPredicted RBP6.35□□□□□ -1.39
AC090023.2-201ENST00000540875 DIP2BQ9P265 1576 aa6.35□□□□□ -1.39
AC090023.2-201ENST00000540875 MAGI1Q96QZ7 1491 aaPredicted RBP6.34□□□□□ -1.39
AC090023.2-201ENST00000540875 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.34□□□□□ -1.39
AC090023.2-201ENST00000540875 TTC36A6NLP5 189 aa6.34□□□□□ -1.39
AC090023.2-201ENST00000540875 POM121CA8CG34 1229 aa6.34□□□□□ -1.39
AC090023.2-201ENST00000540875 PATL2C9JE40 543 aaKnown RBP6.34□□□□□ -1.39
AC090023.2-201ENST00000540875 TNFRSF10AO00220 468 aa6.34□□□□□ -1.39
AC090023.2-201ENST00000540875 SYCP1Q15431 976 aa6.34□□□□□ -1.39
AC090023.2-201ENST00000540875 TRMT44Q8IYL2 757 aaKnown RBP6.34□□□□□ -1.39
AC090023.2-201ENST00000540875 MPNDQ8N594 471 aa6.34□□□□□ -1.39
AC090023.2-201ENST00000540875 MNS1Q8NEH6 495 aa6.34□□□□□ -1.39
AC090023.2-201ENST00000540875 PSMD1Q99460 953 aa6.34□□□□□ -1.39
AC090023.2-201ENST00000540875 PANK2Q9BZ23 570 aa6.34□□□□□ -1.39
AC090023.2-201ENST00000540875 PRKRIP1Q9H875 184 aaPredicted RBP6.34□□□□□ -1.39
AC090023.2-201ENST00000540875 SLC52A1Q9NWF4 448 aa6.34□□□□□ -1.39
AC090023.2-201ENST00000540875 POLA1P09884 1462 aaPredicted RBP6.34□□□□□ -1.4
AC090023.2-201ENST00000540875 RAD54L2Q9Y4B4 1467 aa6.34□□□□□ -1.4
AC090023.2-201ENST00000540875 NCOA1Q15788 1441 aa6.33□□□□□ -1.4
AC090023.2-201ENST00000540875 SPATA31D1Q6ZQQ2 1576 aa6.33□□□□□ -1.4
AC090023.2-201ENST00000540875 PRR20EP86478 221 aa6.33□□□□□ -1.4
AC090023.2-201ENST00000540875 PRR20CP86479 221 aa6.33□□□□□ -1.4
AC090023.2-201ENST00000540875 PRR20DP86480 221 aa6.33□□□□□ -1.4
AC090023.2-201ENST00000540875 PRR20BP86481 221 aa6.33□□□□□ -1.4
AC090023.2-201ENST00000540875 PRR20AP86496 221 aa6.33□□□□□ -1.4
AC090023.2-201ENST00000540875 NBPF9Q3BBW0 867 aa6.33□□□□□ -1.4
AC090023.2-201ENST00000540875 SNIP1Q8TAD8 396 aaKnown RBP6.33□□□□□ -1.4
AC090023.2-201ENST00000540875 CDK15Q96Q40 435 aa6.33□□□□□ -1.4
AC090023.2-201ENST00000540875 NCAPGQ9BPX3 1015 aa6.33□□□□□ -1.4
AC090023.2-201ENST00000540875 PRDM10Q9NQV6 1147 aa6.33□□□□□ -1.4
AC090023.2-201ENST00000540875 TOR4AQ9NXH8 423 aa6.33□□□□□ -1.4
AC090023.2-201ENST00000540875 ZNF777Q9ULD5 760 aaPredicted RBP6.33□□□□□ -1.4
AC090023.2-201ENST00000540875 R3HCC1Q9Y3T6 440 aaKnown RBP6.33□□□□□ -1.4
AC090023.2-201ENST00000540875 CEP83Q9Y592 693 aa6.33□□□□□ -1.4
AC090023.2-201ENST00000540875 TSPOAP1O95153 1857 aa6.32□□□□□ -1.4
AC090023.2-201ENST00000540875 TONSLQ96HA7 1378 aa6.32□□□□□ -1.4
AC090023.2-201ENST00000540875 KDM2BQ8NHM5 1336 aa6.32□□□□□ -1.4
AC090023.2-201ENST00000540875 GRM5P41594 1212 aa6.32□□□□□ -1.4
AC090023.2-201ENST00000540875 SSR1P43307 286 aaKnown RBP6.32□□□□□ -1.4
AC090023.2-201ENST00000540875 LMOD3Q0VAK6 560 aa6.32□□□□□ -1.4
AC090023.2-201ENST00000540875 C8orf34Q49A92 452 aa6.32□□□□□ -1.4
AC090023.2-201ENST00000540875 RPAINQ86UA6 219 aa6.32□□□□□ -1.4
AC090023.2-201ENST00000540875 DZIP3Q86Y13 1208 aaKnown RBP6.32□□□□□ -1.4
AC090023.2-201ENST00000540875 ALG2Q9H553 416 aa6.32□□□□□ -1.4
AC090023.2-201ENST00000540875 MRS2Q9HD23 443 aa6.32□□□□□ -1.4
AC090023.2-201ENST00000540875 OGFRQ9NZT2 677 aa6.32□□□□□ -1.4
AC090023.2-201ENST00000540875 CHMP5Q9NZZ3 219 aa6.32□□□□□ -1.4
AC090023.2-201ENST00000540875 PCDHB9Q9Y5E1 797 aa6.32□□□□□ -1.4
AC090023.2-201ENST00000540875 EIF3AQ14152 1382 aaKnown RBP6.31□□□□□ -1.4
AC090023.2-201ENST00000540875 KIF16BQ96L93 1317 aa6.31□□□□□ -1.4
AC090023.2-201ENST00000540875 GRIN2BQ13224 1484 aa6.31□□□□□ -1.4
AC090023.2-201ENST00000540875 MCCD1P59942 119 aaPredicted RBP6.31□□□□□ -1.4
AC090023.2-201ENST00000540875 EIF4G2P78344 907 aaKnown RBP eCLIP6.31□□□□□ -1.4
AC090023.2-201ENST00000540875 ARID5BQ14865 1188 aa6.31□□□□□ -1.4
AC090023.2-201ENST00000540875 CC2D2BQ6DHV5 1058 aa6.31□□□□□ -1.4
AC090023.2-201ENST00000540875 ZNF771Q7L3S4 317 aaPredicted RBP6.31□□□□□ -1.4
AC090023.2-201ENST00000540875 CYP4X1Q8N118 509 aa6.31□□□□□ -1.4
AC090023.2-201ENST00000540875 ADAMTS19Q8TE59 1207 aa6.31□□□□□ -1.4
AC090023.2-201ENST00000540875 PDLIM2Q96JY6 352 aa6.31□□□□□ -1.4
AC090023.2-201ENST00000540875 SMC4Q9NTJ3 1288 aa6.31□□□□□ -1.4
AC090023.2-201ENST00000540875 PDZRN3Q9UPQ7 1066 aa6.31□□□□□ -1.4
AC090023.2-201ENST00000540875 ZKSCAN5Q9Y2L8 839 aa6.31□□□□□ -1.4
AC090023.2-201ENST00000540875 SOGA1O94964 1423 aa6.31□□□□□ -1.4
AC090023.2-201ENST00000540875 CEP170Q5SW79 1584 aa6.31□□□□□ -1.4
AC090023.2-201ENST00000540875 NLRP1Q9C000 1473 aa6.3□□□□□ -1.4
AC090023.2-201ENST00000540875 TTC24A2A3L6 582 aaPredicted RBP6.3□□□□□ -1.4
AC090023.2-201ENST00000540875 J3QL48 77 aa6.3□□□□□ -1.4
AC090023.2-201ENST00000540875 MAFGO15525 162 aa6.3□□□□□ -1.4
AC090023.2-201ENST00000540875 ALDH1A1P00352 501 aa6.3□□□□□ -1.4
AC090023.2-201ENST00000540875 CCDC172P0C7W6 258 aa6.3□□□□□ -1.4
AC090023.2-201ENST00000540875 KCNJ4P48050 445 aa6.3□□□□□ -1.4
AC090023.2-201ENST00000540875 NASPP49321 788 aaPredicted RBP6.3□□□□□ -1.4
AC090023.2-201ENST00000540875 HDGFL1Q5TGJ6 251 aa6.3□□□□□ -1.4
AC090023.2-201ENST00000540875 TMC1Q8TDI8 760 aa6.3□□□□□ -1.4
AC090023.2-201ENST00000540875 SIN3AQ96ST3 1273 aa6.3□□□□□ -1.4
AC090023.2-201ENST00000540875 CEP126Q9P2H0 1117 aa6.3□□□□□ -1.4
AC090023.2-201ENST00000540875 CCDC39Q9UFE4 941 aa6.3□□□□□ -1.4
AC090023.2-201ENST00000540875 TLL2Q9Y6L7 1015 aa6.3□□□□□ -1.4
AC090023.2-201ENST00000540875 NCOA3Q9Y6Q9 1424 aa6.3□□□□□ -1.4
AC090023.2-201ENST00000540875 LRPPRCP42704 1394 aaKnown RBP6.3□□□□□ -1.4
AC090023.2-201ENST00000540875 KDM5BQ9UGL1 1544 aa6.3□□□□□ -1.4
AC090023.2-201ENST00000540875 MAPK8IP3Q9UPT6 1336 aa6.29□□□□□ -1.4
AC090023.2-201ENST00000540875 GFRA3O60609 400 aa6.29□□□□□ -1.4
AC090023.2-201ENST00000540875 SMPD1P17405 629 aa6.29□□□□□ -1.4
AC090023.2-201ENST00000540875 SOX11P35716 441 aa6.29□□□□□ -1.4
AC090023.2-201ENST00000540875 MAP2K1Q02750 393 aaPredicted RBP6.29□□□□□ -1.4
AC090023.2-201ENST00000540875 TRDNQ13061 729 aa6.29□□□□□ -1.4
AC090023.2-201ENST00000540875 SEMA3FQ13275 785 aa6.29□□□□□ -1.4
AC090023.2-201ENST00000540875 ZKSCAN8Q15776 578 aaPredicted RBP6.29□□□□□ -1.4
AC090023.2-201ENST00000540875 NBPF10Q6P3W6 841 aaKnown RBP6.29□□□□□ -1.4
AC090023.2-201ENST00000540875 CASC1Q6TDU7 716 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms