RNA–Protein interactions for RNA: ENST00000539469.6

PDZRN4-203, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best) BASIC

Gene PDZRN4, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-203ENST00000539469 SLIT2O94813 1529 aa7.78□□□□□ -1.16
PDZRN4-203ENST00000539469 CSB-PGBD3P0DP91 1061 aa7.78□□□□□ -1.16
PDZRN4-203ENST00000539469 STRN4Q9NRL3 753 aa7.78□□□□□ -1.16
PDZRN4-203ENST00000539469 TMED8Q6PL24 325 aaPredicted RBP7.78□□□□□ -1.16
PDZRN4-203ENST00000539469 MCM10Q7L590 875 aa7.78□□□□□ -1.16
PDZRN4-203ENST00000539469 NGEFQ8N5V2 710 aa7.78□□□□□ -1.16
PDZRN4-203ENST00000539469 FAM212AQ96EL1 285 aa7.78□□□□□ -1.16
PDZRN4-203ENST00000539469 PCMTD1Q96MG8 357 aaPredicted RBP7.78□□□□□ -1.16
PDZRN4-203ENST00000539469 CRB1P82279 1406 aa7.77□□□□□ -1.17
PDZRN4-203ENST00000539469 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.77□□□□□ -1.17
PDZRN4-203ENST00000539469 WDR63Q8IWG1 891 aa7.77□□□□□ -1.17
PDZRN4-203ENST00000539469 TSR2Q969E8 191 aaKnown RBP7.77□□□□□ -1.17
PDZRN4-203ENST00000539469 OVOS2A0A0G2JMS6 1433 aa7.77□□□□□ -1.17
PDZRN4-203ENST00000539469 MAP3K5Q99683 1374 aa7.77□□□□□ -1.17
PDZRN4-203ENST00000539469 COG6Q9Y2V7 657 aa7.76□□□□□ -1.17
PDZRN4-203ENST00000539469 MS4A1P11836 297 aa7.76□□□□□ -1.17
PDZRN4-203ENST00000539469 TAF7LQ5H9L4 462 aa7.76□□□□□ -1.17
PDZRN4-203ENST00000539469 TOM1L2Q6ZVM7 507 aa7.76□□□□□ -1.17
PDZRN4-203ENST00000539469 EXOC6Q8TAG9 804 aa7.76□□□□□ -1.17
PDZRN4-203ENST00000539469 DISP2A7MBM2 1401 aa7.76□□□□□ -1.17
PDZRN4-203ENST00000539469 PDE4AP27815 886 aa7.76□□□□□ -1.17
PDZRN4-203ENST00000539469 RASEFQ8IZ41 740 aa7.75□□□□□ -1.17
PDZRN4-203ENST00000539469 GAS2L2Q8NHY3 880 aa7.75□□□□□ -1.17
PDZRN4-203ENST00000539469 KIAA1522Q9P206 1035 aaPredicted RBP7.75□□□□□ -1.17
PDZRN4-203ENST00000539469 SSUH2Q9Y2M2 353 aa7.75□□□□□ -1.17
PDZRN4-203ENST00000539469 KDM6AO15550 1401 aaPredicted RBP7.75□□□□□ -1.17
PDZRN4-203ENST00000539469 BCL9LQ86UU0 1499 aa7.75□□□□□ -1.17
PDZRN4-203ENST00000539469 FRAT1Q92837 279 aaPredicted RBP7.75□□□□□ -1.17
PDZRN4-203ENST00000539469 IL16Q14005 1332 aa7.75□□□□□ -1.17
PDZRN4-203ENST00000539469 GNAT3A8MTJ3 354 aa7.74□□□□□ -1.17
PDZRN4-203ENST00000539469 ZNF853P0CG23 659 aa7.74□□□□□ -1.17
PDZRN4-203ENST00000539469 ZNF530Q6P9A1 599 aaPredicted RBP7.74□□□□□ -1.17
PDZRN4-203ENST00000539469 IL17REQ8NFR9 667 aa7.74□□□□□ -1.17
PDZRN4-203ENST00000539469 CARD10Q9BWT7 1032 aa7.74□□□□□ -1.17
PDZRN4-203ENST00000539469 CEMIPQ8WUJ3 1361 aa7.74□□□□□ -1.17
PDZRN4-203ENST00000539469 ITGB4P16144 1822 aa7.74□□□□□ -1.17
PDZRN4-203ENST00000539469 EVA1CP58658 441 aa7.74□□□□□ -1.17
PDZRN4-203ENST00000539469 SPATA31A6Q5VVP1 1343 aa7.74□□□□□ -1.17
PDZRN4-203ENST00000539469 SGIP1Q9BQI5 828 aa7.74□□□□□ -1.17
PDZRN4-203ENST00000539469 LGR6Q9HBX8 967 aa7.74□□□□□ -1.17
PDZRN4-203ENST00000539469 MBIPQ9NS73 344 aa7.74□□□□□ -1.17
PDZRN4-203ENST00000539469 DOT1LQ8TEK3 1739 aa7.74□□□□□ -1.17
PDZRN4-203ENST00000539469 C5P01031 1676 aa7.74□□□□□ -1.17
PDZRN4-203ENST00000539469 PAPPAQ13219 1627 aa7.74□□□□□ -1.17
PDZRN4-203ENST00000539469 TATP17735 454 aaPredicted RBP7.73□□□□□ -1.17
PDZRN4-203ENST00000539469 FECHP22830 423 aa7.73□□□□□ -1.17
PDZRN4-203ENST00000539469 LMOD3Q0VAK6 560 aa7.73□□□□□ -1.17
PDZRN4-203ENST00000539469 RAPGEF4Q8WZA2 1011 aa7.73□□□□□ -1.17
PDZRN4-203ENST00000539469 CALR3Q96L12 384 aaKnown RBP7.73□□□□□ -1.17
PDZRN4-203ENST00000539469 C8orf37Q96NL8 207 aa7.73□□□□□ -1.17
PDZRN4-203ENST00000539469 GLI3P10071 1580 aa7.73□□□□□ -1.17
PDZRN4-203ENST00000539469 MRC1P22897 1456 aa7.73□□□□□ -1.17
PDZRN4-203ENST00000539469 PLEKHO1Q53GL0 409 aaPredicted RBP7.73□□□□□ -1.17
PDZRN4-203ENST00000539469 PROCA1Q8NCQ7 364 aaPredicted RBP7.73□□□□□ -1.17
PDZRN4-203ENST00000539469 RCAN3Q9UKA8 241 aa7.73□□□□□ -1.17
PDZRN4-203ENST00000539469 RNF123Q5XPI4 1314 aa7.73□□□□□ -1.17
PDZRN4-203ENST00000539469 POM121CA8CG34 1229 aa7.73□□□□□ -1.17
PDZRN4-203ENST00000539469 GPR37O15354 613 aa7.73□□□□□ -1.17
PDZRN4-203ENST00000539469 CYP27B1O15528 508 aa7.73□□□□□ -1.17
PDZRN4-203ENST00000539469 PLIN1O60240 522 aa7.73□□□□□ -1.17
PDZRN4-203ENST00000539469 EXOSC9Q06265 439 aaKnown RBP7.73□□□□□ -1.17
PDZRN4-203ENST00000539469 AKAP4Q5JQC9 854 aa7.73□□□□□ -1.17
PDZRN4-203ENST00000539469 MPRIPQ6WCQ1 1025 aa7.73□□□□□ -1.17
PDZRN4-203ENST00000539469 MRRFQ96E11 262 aaKnown RBP7.73□□□□□ -1.17
PDZRN4-203ENST00000539469 IFT57Q9NWB7 429 aa7.73□□□□□ -1.17
PDZRN4-203ENST00000539469 MIS18AQ9NYP9 233 aa7.73□□□□□ -1.17
PDZRN4-203ENST00000539469 PLEKHG2Q9H7P9 1386 aa7.72□□□□□ -1.17
PDZRN4-203ENST00000539469 THSD7AQ9UPZ6 1657 aa7.72□□□□□ -1.17
PDZRN4-203ENST00000539469 SKIV2LQ15477 1246 aaKnown RBP7.72□□□□□ -1.17
PDZRN4-203ENST00000539469 AMOTQ4VCS5 1084 aa7.72□□□□□ -1.17
PDZRN4-203ENST00000539469 MYH16Q9H6N6 1097 aa7.72□□□□□ -1.17
PDZRN4-203ENST00000539469 UBR2Q8IWV8 1755 aa7.72□□□□□ -1.17
PDZRN4-203ENST00000539469 SPATA31A1Q5TZJ5 1347 aa7.72□□□□□ -1.17
PDZRN4-203ENST00000539469 IL2RBP14784 551 aa7.72□□□□□ -1.17
PDZRN4-203ENST00000539469 PHKG2P15735 406 aa7.72□□□□□ -1.17
PDZRN4-203ENST00000539469 NFKBIBQ15653 356 aa7.72□□□□□ -1.17
PDZRN4-203ENST00000539469 KRT24Q2M2I5 525 aa7.72□□□□□ -1.17
PDZRN4-203ENST00000539469 SNRKQ9NRH2 765 aa7.72□□□□□ -1.17
PDZRN4-203ENST00000539469 HTATSF1O43719 755 aaKnown RBP7.71□□□□□ -1.17
PDZRN4-203ENST00000539469 SND1Q7KZF4 910 aaKnown RBP eCLIP7.71□□□□□ -1.17
PDZRN4-203ENST00000539469 TSPYL6Q8N831 410 aa7.71□□□□□ -1.17
PDZRN4-203ENST00000539469 RTF1Q92541 710 aaKnown RBP7.71□□□□□ -1.17
PDZRN4-203ENST00000539469 REPIN1Q9BWE0 567 aaKnown RBP7.71□□□□□ -1.17
PDZRN4-203ENST00000539469 IGSF5Q9NSI5 407 aa7.71□□□□□ -1.17
PDZRN4-203ENST00000539469 SPATA31A5Q5VU36 1347 aa7.71□□□□□ -1.18
PDZRN4-203ENST00000539469 SPATA31A7Q8IWB4 1347 aa7.71□□□□□ -1.18
PDZRN4-203ENST00000539469 SPDYE2BA6NHP3 402 aa7.71□□□□□ -1.18
PDZRN4-203ENST00000539469 CHL1O00533 1208 aa7.71□□□□□ -1.18
PDZRN4-203ENST00000539469 RNMTO43148 476 aaKnown RBP7.71□□□□□ -1.18
PDZRN4-203ENST00000539469 BCAR3O75815 825 aa7.71□□□□□ -1.18
PDZRN4-203ENST00000539469 BRD1O95696 1058 aa7.71□□□□□ -1.18
PDZRN4-203ENST00000539469 SPDYE6P0CI01 402 aa7.71□□□□□ -1.18
PDZRN4-203ENST00000539469 GNAI1P63096 354 aa7.71□□□□□ -1.18
PDZRN4-203ENST00000539469 SPDYE2Q495Y8 402 aa7.71□□□□□ -1.18
PDZRN4-203ENST00000539469 C1orf141Q5JVX7 400 aa7.7□□□□□ -1.18
PDZRN4-203ENST00000539469 GDPD2Q9HCC8 539 aa7.7□□□□□ -1.18
PDZRN4-203ENST00000539469 POLR3EQ9NVU0 708 aa7.7□□□□□ -1.18
PDZRN4-203ENST00000539469 TNS2Q63HR2 1409 aa7.7□□□□□ -1.18
PDZRN4-203ENST00000539469 RRP1P56182 461 aaKnown RBP7.7□□□□□ -1.18
PDZRN4-203ENST00000539469 UNC5CLQ8IV45 518 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms