RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 RCAN3Q9UKA8 241 aa13.09□□□□□ -0.31
CLPB-210ENST00000539148 KIF16BQ96L93 1317 aa13.09□□□□□ -0.31
CLPB-210ENST00000539148 C5P01031 1676 aa13.08□□□□□ -0.31
CLPB-210ENST00000539148 COL5A3P25940 1745 aaPredicted RBP13.08□□□□□ -0.32
CLPB-210ENST00000539148 KCNQ3O43525 872 aa13.08□□□□□ -0.32
CLPB-210ENST00000539148 VAMP4O75379 141 aa13.08□□□□□ -0.32
CLPB-210ENST00000539148 MS4A1P11836 297 aa13.08□□□□□ -0.32
CLPB-210ENST00000539148 HYPKQ9NX55 129 aa13.08□□□□□ -0.32
CLPB-210ENST00000539148 TJP1Q07157 1748 aa13.08□□□□□ -0.32
CLPB-210ENST00000539148 EIF2S2P20042 333 aaKnown RBP13.07□□□□□ -0.32
CLPB-210ENST00000539148 RC3H1Q5TC82 1133 aaKnown RBP13.07□□□□□ -0.32
CLPB-210ENST00000539148 SMC4Q9NTJ3 1288 aa13.07□□□□□ -0.32
CLPB-210ENST00000539148 DDX58O95786 925 aaKnown RBP13.06□□□□□ -0.32
CLPB-210ENST00000539148 CANXP27824 592 aaKnown RBP13.06□□□□□ -0.32
CLPB-210ENST00000539148 TXNRD1Q16881 649 aa13.06□□□□□ -0.32
CLPB-210ENST00000539148 DDX21Q9NR30 783 aaKnown RBP eCLIP13.06□□□□□ -0.32
CLPB-210ENST00000539148 CNTNAP4Q9C0A0 1308 aa13.06□□□□□ -0.32
CLPB-210ENST00000539148 A0A087WZG4 1122 aa13.05□□□□□ -0.32
CLPB-210ENST00000539148 DNAJC10Q8IXB1 793 aa13.05□□□□□ -0.32
CLPB-210ENST00000539148 TSPYL6Q8N831 410 aa13.05□□□□□ -0.32
CLPB-210ENST00000539148 FLAD1Q8NFF5 587 aa13.05□□□□□ -0.32
CLPB-210ENST00000539148 CCDC87Q9NVE4 849 aa13.05□□□□□ -0.32
CLPB-210ENST00000539148 SLC4A2P04920 1241 aa13.04□□□□□ -0.32
CLPB-210ENST00000539148 CYP19A1P11511 503 aaPredicted RBP13.04□□□□□ -0.32
CLPB-210ENST00000539148 IL6STP40189 918 aaPredicted RBP13.04□□□□□ -0.32
CLPB-210ENST00000539148 RARSP54136 660 aaKnown RBP13.04□□□□□ -0.32
CLPB-210ENST00000539148 BRPF1P55201 1214 aaPredicted RBP13.04□□□□□ -0.32
CLPB-210ENST00000539148 FKBP8Q14318 412 aa13.04□□□□□ -0.32
CLPB-210ENST00000539148 NBPF14Q5TI25 921 aa13.04□□□□□ -0.32
CLPB-210ENST00000539148 AK7Q96M32 723 aa13.04□□□□□ -0.32
CLPB-210ENST00000539148 USP16Q9Y5T5 823 aa13.04□□□□□ -0.32
CLPB-210ENST00000539148 PTPRCP08575 1304 aa13.04□□□□□ -0.32
CLPB-210ENST00000539148 C4BP0C0L5 1744 aa13.04□□□□□ -0.32
CLPB-210ENST00000539148 CRKLP46109 303 aaKnown RBP13.03□□□□□ -0.32
CLPB-210ENST00000539148 KRT24Q2M2I5 525 aa13.03□□□□□ -0.32
CLPB-210ENST00000539148 API5Q9BZZ5 524 aaKnown RBP13.03□□□□□ -0.32
CLPB-210ENST00000539148 RTCBQ9Y3I0 505 aaKnown RBP13.03□□□□□ -0.32
CLPB-210ENST00000539148 RREB1Q92766 1687 aa13.02□□□□□ -0.32
CLPB-210ENST00000539148 ADRA2BP18089 450 aa13.02□□□□□ -0.33
CLPB-210ENST00000539148 KIF6Q6ZMV9 814 aa13.02□□□□□ -0.33
CLPB-210ENST00000539148 PTF1AQ7RTS3 328 aa13.02□□□□□ -0.33
CLPB-210ENST00000539148 ARHGAP45Q92619 1136 aa13.02□□□□□ -0.33
CLPB-210ENST00000539148 RGL2O15211 777 aa13.01□□□□□ -0.33
CLPB-210ENST00000539148 EN1Q05925 392 aaPredicted RBP13.01□□□□□ -0.33
CLPB-210ENST00000539148 ZKSCAN2Q63HK3 967 aa13.01□□□□□ -0.33
CLPB-210ENST00000539148 SSH1Q8WYL5 1049 aa13.01□□□□□ -0.33
CLPB-210ENST00000539148 NECTIN2Q92692 538 aa13.01□□□□□ -0.33
CLPB-210ENST00000539148 CHMP4BQ9H444 224 aaKnown RBP13.01□□□□□ -0.33
CLPB-210ENST00000539148 STK32BQ9NY57 414 aa13.01□□□□□ -0.33
CLPB-210ENST00000539148 CHPF2Q9P2E5 772 aa13.01□□□□□ -0.33
CLPB-210ENST00000539148 MYH14Q7Z406 1995 aaKnown RBP13.01□□□□□ -0.33
CLPB-210ENST00000539148 QSER1Q2KHR3 1735 aa13□□□□□ -0.33
CLPB-210ENST00000539148 RPS6KA4O75676 772 aa13□□□□□ -0.33
CLPB-210ENST00000539148 MYL6BP14649 208 aa13□□□□□ -0.33
CLPB-210ENST00000539148 FKBP5Q13451 457 aaPredicted RBP13□□□□□ -0.33
CLPB-210ENST00000539148 ITPK1Q13572 414 aa13□□□□□ -0.33
CLPB-210ENST00000539148 SLC4A9Q96Q91 983 aa13□□□□□ -0.33
CLPB-210ENST00000539148 CAMKK2Q96RR4 588 aa13□□□□□ -0.33
CLPB-210ENST00000539148 ZNF652Q9Y2D9 606 aa13□□□□□ -0.33
CLPB-210ENST00000539148 UBR3Q6ZT12 1888 aa12.99□□□□□ -0.33
CLPB-210ENST00000539148 RNF123Q5XPI4 1314 aa12.99□□□□□ -0.33
CLPB-210ENST00000539148 GNPATO15228 680 aa12.99□□□□□ -0.33
CLPB-210ENST00000539148 A1BGP04217 495 aa12.99□□□□□ -0.33
CLPB-210ENST00000539148 SSFA2P28290 1259 aa12.99□□□□□ -0.33
CLPB-210ENST00000539148 NEXNQ0ZGT2 675 aa12.99□□□□□ -0.33
CLPB-210ENST00000539148 FLIIQ13045 1269 aa12.99□□□□□ -0.33
CLPB-210ENST00000539148 HSP90AB3PQ58FF7 597 aa12.99□□□□□ -0.33
CLPB-210ENST00000539148 MRPL50Q8N5N7 158 aaKnown RBP12.99□□□□□ -0.33
CLPB-210ENST00000539148 FRAT1Q92837 279 aaPredicted RBP12.99□□□□□ -0.33
CLPB-210ENST00000539148 ARXQ96QS3 562 aa12.99□□□□□ -0.33
CLPB-210ENST00000539148 ZNF330Q9Y3S2 320 aaPredicted RBP12.99□□□□□ -0.33
CLPB-210ENST00000539148 PRAMEF22A3QJZ6 481 aa12.98□□□□□ -0.33
CLPB-210ENST00000539148 ZPR1O75312 459 aa12.98□□□□□ -0.33
CLPB-210ENST00000539148 EZH2Q15910 746 aaKnown RBP12.98□□□□□ -0.33
CLPB-210ENST00000539148 TRAPPC3LQ5T215 181 aa12.98□□□□□ -0.33
CLPB-210ENST00000539148 RIC3Q7Z5B4 369 aa12.98□□□□□ -0.33
CLPB-210ENST00000539148 FTSJ3Q8IY81 847 aaKnown RBP12.98□□□□□ -0.33
CLPB-210ENST00000539148 LINC00116Q8NCU8 138 aa12.98□□□□□ -0.33
CLPB-210ENST00000539148 PPP4R2Q9NY27 417 aa12.98□□□□□ -0.33
CLPB-210ENST00000539148 TFCP2L1Q9NZI6 479 aa12.98□□□□□ -0.33
CLPB-210ENST00000539148 HDAC5Q9UQL6 1122 aa12.98□□□□□ -0.33
CLPB-210ENST00000539148 NUP188Q5SRE5 1749 aa12.98□□□□□ -0.33
CLPB-210ENST00000539148 COL15A1P39059 1388 aa12.97□□□□□ -0.33
CLPB-210ENST00000539148 ERVV-1B6SEH8 477 aa12.97□□□□□ -0.33
CLPB-210ENST00000539148 RFC4P35249 363 aa12.97□□□□□ -0.33
CLPB-210ENST00000539148 EIF5P55010 431 aaKnown RBP12.97□□□□□ -0.33
CLPB-210ENST00000539148 INTS5Q6P9B9 1019 aaKnown RBP12.97□□□□□ -0.33
CLPB-210ENST00000539148 KSR2Q6VAB6 950 aa12.97□□□□□ -0.33
CLPB-210ENST00000539148 ATF7IPQ6VMQ6 1270 aa12.97□□□□□ -0.33
CLPB-210ENST00000539148 ANKRD13DQ6ZTN6 518 aa12.97□□□□□ -0.33
CLPB-210ENST00000539148 COPS6Q7L5N1 327 aa12.97□□□□□ -0.33
CLPB-210ENST00000539148 PLBD2Q8NHP8 589 aa12.97□□□□□ -0.33
CLPB-210ENST00000539148 BCL2L13Q9BXK5 485 aa12.97□□□□□ -0.33
CLPB-210ENST00000539148 LRRC4BQ9NT99 713 aa12.97□□□□□ -0.33
CLPB-210ENST00000539148 ZBTB1Q9Y2K1 713 aa12.97□□□□□ -0.33
CLPB-210ENST00000539148 AIMP1Q12904 312 aaKnown RBP12.96□□□□□ -0.33
CLPB-210ENST00000539148 PDE3AQ14432 1141 aa12.96□□□□□ -0.33
CLPB-210ENST00000539148 PDIA6Q15084 440 aa12.96□□□□□ -0.33
CLPB-210ENST00000539148 DZIP3Q86Y13 1208 aaKnown RBP12.96□□□□□ -0.33
CLPB-210ENST00000539148 PROM2Q8N271 834 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms