RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 LRRC27Q9C0I9 530 aa7.99□□□□□ -1.13
SORT1-209ENST00000538502 RBM28Q9NW13 759 aaKnown RBP7.99□□□□□ -1.13
SORT1-209ENST00000538502 HMG20BQ9P0W2 317 aa7.99□□□□□ -1.13
SORT1-209ENST00000538502 SPDYE4A6NLX3 237 aa7.99□□□□□ -1.13
SORT1-209ENST00000538502 TMEM57Q8N5G2 664 aa7.99□□□□□ -1.13
SORT1-209ENST00000538502 RAB34Q9BZG1 259 aa7.99□□□□□ -1.13
SORT1-209ENST00000538502 PTPRCP08575 1304 aa7.99□□□□□ -1.13
SORT1-209ENST00000538502 CTAGE15A4D2H0 777 aa7.99□□□□□ -1.13
SORT1-209ENST00000538502 CTAGE8P0CG41 777 aa7.99□□□□□ -1.13
SORT1-209ENST00000538502 CTAGE6Q86UF2 777 aa7.99□□□□□ -1.13
SORT1-209ENST00000538502 CTAGE4Q8IX94 777 aa7.99□□□□□ -1.13
SORT1-209ENST00000538502 WDR66Q8TBY9 1149 aa7.99□□□□□ -1.13
SORT1-209ENST00000538502 TSR2Q969E8 191 aaKnown RBP7.99□□□□□ -1.13
SORT1-209ENST00000538502 TTC14Q96N46 770 aa7.99□□□□□ -1.13
SORT1-209ENST00000538502 NFE2L2Q16236 605 aa7.99□□□□□ -1.13
SORT1-209ENST00000538502 RSRC1Q96IZ7 334 aaKnown RBP7.99□□□□□ -1.13
SORT1-209ENST00000538502 FYB1O15117 783 aa7.99□□□□□ -1.13
SORT1-209ENST00000538502 RARSP54136 660 aaKnown RBP7.99□□□□□ -1.13
SORT1-209ENST00000538502 ANAPC15P60006 121 aa7.99□□□□□ -1.13
SORT1-209ENST00000538502 DAAM2Q86T65 1068 aa7.99□□□□□ -1.13
SORT1-209ENST00000538502 CNKSR2Q8WXI2 1034 aa7.99□□□□□ -1.13
SORT1-209ENST00000538502 C8orf76Q96K31 380 aa7.99□□□□□ -1.13
SORT1-209ENST00000538502 SEPT11Q9NVA2 429 aaKnown RBP7.99□□□□□ -1.13
SORT1-209ENST00000538502 RMND1Q9NWS8 449 aa7.99□□□□□ -1.13
SORT1-209ENST00000538502 CNNM3Q8NE01 707 aa7.98□□□□□ -1.13
SORT1-209ENST00000538502 NSD2O96028 1365 aa7.98□□□□□ -1.13
SORT1-209ENST00000538502 ZNF165P49910 485 aa7.98□□□□□ -1.13
SORT1-209ENST00000538502 AMPD3Q01432 767 aa7.98□□□□□ -1.13
SORT1-209ENST00000538502 FAM200AQ8TCP9 573 aa7.98□□□□□ -1.13
SORT1-209ENST00000538502 CCDC113Q9H0I3 377 aa7.98□□□□□ -1.13
SORT1-209ENST00000538502 ZNF287Q9HBT7 754 aa7.98□□□□□ -1.13
SORT1-209ENST00000538502 CABP2Q9NPB3 220 aa7.98□□□□□ -1.13
SORT1-209ENST00000538502 EBAG9O00559 213 aa7.98□□□□□ -1.13
SORT1-209ENST00000538502 XRCC6P12956 609 aaKnown RBP eCLIP7.98□□□□□ -1.13
SORT1-209ENST00000538502 TRHP20396 242 aaPredicted RBP7.98□□□□□ -1.13
SORT1-209ENST00000538502 IPO4Q8TEX9 1081 aaKnown RBP7.98□□□□□ -1.13
SORT1-209ENST00000538502 CNNM1Q9NRU3 951 aa7.98□□□□□ -1.13
SORT1-209ENST00000538502 C9orf84Q5VXU9 1444 aa7.98□□□□□ -1.13
SORT1-209ENST00000538502 CCDC12Q8WUD4 166 aaPredicted RBP7.98□□□□□ -1.13
SORT1-209ENST00000538502 GOPCQ9HD26 462 aa7.98□□□□□ -1.13
SORT1-209ENST00000538502 AKAP2Q9Y2D5 859 aa7.98□□□□□ -1.13
SORT1-209ENST00000538502 CCDC121Q6ZUS5 278 aa7.98□□□□□ -1.13
SORT1-209ENST00000538502 DDX46Q7L014 1031 aaKnown RBP7.98□□□□□ -1.13
SORT1-209ENST00000538502 ARFGAP2Q8N6H7 521 aa7.98□□□□□ -1.13
SORT1-209ENST00000538502 BCCIPQ9P287 314 aaKnown RBP eCLIP7.98□□□□□ -1.13
SORT1-209ENST00000538502 PRPHP41219 470 aa7.98□□□□□ -1.13
SORT1-209ENST00000538502 SSR1P43307 286 aaKnown RBP7.98□□□□□ -1.13
SORT1-209ENST00000538502 TMEM132AQ24JP5 1023 aa7.98□□□□□ -1.13
SORT1-209ENST00000538502 SPECC1Q5M775 1068 aa7.98□□□□□ -1.13
SORT1-209ENST00000538502 MAATS1Q7Z4T9 603 aa7.98□□□□□ -1.13
SORT1-209ENST00000538502 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.98□□□□□ -1.13
SORT1-209ENST00000538502 FSIP1Q8NA03 581 aa7.98□□□□□ -1.13
SORT1-209ENST00000538502 TRMT1Q9NXH9 659 aaKnown RBP7.98□□□□□ -1.13
SORT1-209ENST00000538502 NCOA1Q15788 1441 aa7.97□□□□□ -1.13
SORT1-209ENST00000538502 SRGAP3O43295 1099 aa7.97□□□□□ -1.13
SORT1-209ENST00000538502 CCDC172P0C7W6 258 aa7.97□□□□□ -1.13
SORT1-209ENST00000538502 IKQ13123 557 aaPredicted RBP7.97□□□□□ -1.13
SORT1-209ENST00000538502 CCDC129Q6ZRS4 1044 aa7.97□□□□□ -1.13
SORT1-209ENST00000538502 POTEDQ86YR6 584 aa7.97□□□□□ -1.13
SORT1-209ENST00000538502 RASAL2Q9UJF2 1139 aa7.97□□□□□ -1.13
SORT1-209ENST00000538502 IL16Q14005 1332 aa7.97□□□□□ -1.13
SORT1-209ENST00000538502 CYLC1P35663 651 aaPredicted RBP7.97□□□□□ -1.13
SORT1-209ENST00000538502 HDAC1Q13547 482 aaPredicted RBP7.97□□□□□ -1.13
SORT1-209ENST00000538502 B4GALNT4Q76KP1 1039 aa7.97□□□□□ -1.13
SORT1-209ENST00000538502 GNG11P61952 73 aa7.97□□□□□ -1.13
SORT1-209ENST00000538502 SPAG1Q07617 926 aa7.97□□□□□ -1.13
SORT1-209ENST00000538502 CPSF2Q9P2I0 782 aaKnown RBP7.97□□□□□ -1.13
SORT1-209ENST00000538502 FBXO3Q9UK99 471 aa7.97□□□□□ -1.13
SORT1-209ENST00000538502 FSD2A1L4K1 749 aa7.97□□□□□ -1.13
SORT1-209ENST00000538502 BMP15O95972 392 aa7.97□□□□□ -1.13
SORT1-209ENST00000538502 ZSCAN22P10073 491 aaPredicted RBP7.97□□□□□ -1.13
SORT1-209ENST00000538502 A0A1B0GUA9 196 aa7.97□□□□□ -1.13
SORT1-209ENST00000538502 NUP133Q8WUM0 1156 aa7.97□□□□□ -1.13
SORT1-209ENST00000538502 SELENOOQ9BVL4 669 aa7.97□□□□□ -1.13
SORT1-209ENST00000538502 SREK1Q8WXA9 508 aaKnown RBP7.96□□□□□ -1.13
SORT1-209ENST00000538502 A0A087WZG4 1122 aa7.96□□□□□ -1.13
SORT1-209ENST00000538502 GSTTP1A0A1W2PQM5 241 aa7.96□□□□□ -1.13
SORT1-209ENST00000538502 GJB2P29033 226 aa7.96□□□□□ -1.13
SORT1-209ENST00000538502 KIF5BP33176 963 aa7.96□□□□□ -1.13
SORT1-209ENST00000538502 TMPOP42166 694 aaKnown RBP7.96□□□□□ -1.13
SORT1-209ENST00000538502 SSRP1Q08945 709 aaKnown RBP7.96□□□□□ -1.13
SORT1-209ENST00000538502 HLTFQ14527 1009 aaKnown RBP eCLIP7.96□□□□□ -1.13
SORT1-209ENST00000538502 HDXQ7Z353 690 aa7.96□□□□□ -1.13
SORT1-209ENST00000538502 OTUD6BQ8N6M0 293 aa7.96□□□□□ -1.13
SORT1-209ENST00000538502 EVI5LQ96CN4 794 aa7.96□□□□□ -1.13
SORT1-209ENST00000538502 PLVAPQ9BX97 442 aa7.96□□□□□ -1.13
SORT1-209ENST00000538502 RSPH14Q9UHP6 348 aa7.96□□□□□ -1.13
SORT1-209ENST00000538502 CTAGE9A4FU28 777 aa7.96□□□□□ -1.14
SORT1-209ENST00000538502 TDO2P48775 406 aa7.96□□□□□ -1.14
SORT1-209ENST00000538502 TMEM266Q2M3C6 531 aa7.96□□□□□ -1.14
SORT1-209ENST00000538502 LARP1Q6PKG0 1096 aaKnown RBP7.96□□□□□ -1.14
SORT1-209ENST00000538502 GBP6Q6ZN66 633 aa7.96□□□□□ -1.14
SORT1-209ENST00000538502 MICALL1Q8N3F8 863 aa7.96□□□□□ -1.14
SORT1-209ENST00000538502 CAPN2P17655 700 aa7.96□□□□□ -1.14
SORT1-209ENST00000538502 ZHX3Q9H4I2 956 aa7.96□□□□□ -1.14
SORT1-209ENST00000538502 SYNJ2O15056 1496 aa7.96□□□□□ -1.14
SORT1-209ENST00000538502 PRPF40BQ6NWY9 871 aaKnown RBP7.96□□□□□ -1.14
SORT1-209ENST00000538502 ERO1AQ96HE7 468 aa7.96□□□□□ -1.14
SORT1-209ENST00000538502 TTC12Q9H892 705 aaPredicted RBP7.96□□□□□ -1.14
SORT1-209ENST00000538502 CFTRP13569 1480 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms