RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 TULP2O00295 520 aa21.27■■□□□ 1
TRA2A-211ENST00000538367 AP5Z1O43299 807 aa21.27■■□□□ 1
TRA2A-211ENST00000538367 CNPY2Q9Y2B0 182 aa21.27■■□□□ 1
TRA2A-211ENST00000538367 EID1Q9Y6B2 187 aa21.27■■□□□ 1
TRA2A-211ENST00000538367 YTHDC2Q9H6S0 1430 aaKnown RBP21.27■■□□□ 1
TRA2A-211ENST00000538367 AOX1Q06278 1338 aa21.26■□□□□ 0.99
TRA2A-211ENST00000538367 RNF20Q5VTR2 975 aa21.26■□□□□ 0.99
TRA2A-211ENST00000538367 F13A1P00488 732 aa21.26■□□□□ 0.99
TRA2A-211ENST00000538367 MSH6P52701 1360 aa21.25■□□□□ 0.99
TRA2A-211ENST00000538367 PLEKHG1Q9ULL1 1385 aa21.25■□□□□ 0.99
TRA2A-211ENST00000538367 TNNT1P13805 278 aa21.25■□□□□ 0.99
TRA2A-211ENST00000538367 TXNDC2Q86VQ3 553 aa21.25■□□□□ 0.99
TRA2A-211ENST00000538367 CABP2Q9NPB3 220 aa21.25■□□□□ 0.99
TRA2A-211ENST00000538367 CCDC171Q6TFL3 1326 aa21.25■□□□□ 0.99
TRA2A-211ENST00000538367 STX6O43752 255 aa21.25■□□□□ 0.99
TRA2A-211ENST00000538367 LTKP29376 864 aa21.25■□□□□ 0.99
TRA2A-211ENST00000538367 PALD1Q9ULE6 856 aa21.25■□□□□ 0.99
TRA2A-211ENST00000538367 KCNJ4P48050 445 aa21.24■□□□□ 0.99
TRA2A-211ENST00000538367 IGSF3O75054 1194 aa21.23■□□□□ 0.99
TRA2A-211ENST00000538367 PTGS1P23219 599 aa21.23■□□□□ 0.99
TRA2A-211ENST00000538367 CHMLP26374 656 aa21.23■□□□□ 0.99
TRA2A-211ENST00000538367 C8orf58Q8NAV2 365 aa21.23■□□□□ 0.99
TRA2A-211ENST00000538367 NEMFO60524 1076 aa21.23■□□□□ 0.99
TRA2A-211ENST00000538367 CDC25BP30305 580 aa21.23■□□□□ 0.99
TRA2A-211ENST00000538367 STK26Q9P289 416 aa21.23■□□□□ 0.99
TRA2A-211ENST00000538367 HSPA4P34932 840 aa21.22■□□□□ 0.99
TRA2A-211ENST00000538367 GIMAP6Q6P9H5 292 aa21.22■□□□□ 0.99
TRA2A-211ENST00000538367 AEBP1Q8IUX7 1158 aa21.22■□□□□ 0.99
TRA2A-211ENST00000538367 HDGFL2Q7Z4V5 671 aaPredicted RBP21.22■□□□□ 0.99
TRA2A-211ENST00000538367 SPC24Q8NBT2 197 aa21.22■□□□□ 0.99
TRA2A-211ENST00000538367 PLCB2Q00722 1185 aa21.21■□□□□ 0.99
TRA2A-211ENST00000538367 ANO2Q9NQ90 1003 aa21.21■□□□□ 0.99
TRA2A-211ENST00000538367 STAP2Q9UGK3 403 aa21.21■□□□□ 0.99
TRA2A-211ENST00000538367 CAVIN2O95810 425 aa21.2■□□□□ 0.98
TRA2A-211ENST00000538367 PLA2G4DQ86XP0 818 aa21.2■□□□□ 0.98
TRA2A-211ENST00000538367 ADAMTS13Q76LX8 1427 aa21.2■□□□□ 0.98
TRA2A-211ENST00000538367 DLC1Q96QB1 1528 aa21.2■□□□□ 0.98
TRA2A-211ENST00000538367 ZSCAN25Q6NSZ9 544 aa21.2■□□□□ 0.98
TRA2A-211ENST00000538367 ERO1AQ96HE7 468 aa21.2■□□□□ 0.98
TRA2A-211ENST00000538367 C16orf45Q96MC5 204 aaPredicted RBP21.2■□□□□ 0.98
TRA2A-211ENST00000538367 ELP1O95163 1332 aa21.19■□□□□ 0.98
TRA2A-211ENST00000538367 SYT1P21579 422 aa21.19■□□□□ 0.98
TRA2A-211ENST00000538367 BCL11BQ9C0K0 894 aaPredicted RBP21.19■□□□□ 0.98
TRA2A-211ENST00000538367 METP08581 1390 aa21.19■□□□□ 0.98
TRA2A-211ENST00000538367 MAP3K11Q16584 847 aa21.19■□□□□ 0.98
TRA2A-211ENST00000538367 KCND1Q9NSA2 647 aa21.19■□□□□ 0.98
TRA2A-211ENST00000538367 ATP7BP35670 1465 aa21.18■□□□□ 0.98
TRA2A-211ENST00000538367 CEP135Q66GS9 1140 aa21.18■□□□□ 0.98
TRA2A-211ENST00000538367 CCDC186Q7Z3E2 898 aa21.18■□□□□ 0.98
TRA2A-211ENST00000538367 TDRD7Q8NHU6 1098 aaKnown RBP21.18■□□□□ 0.98
TRA2A-211ENST00000538367 PHACTR3Q96KR7 559 aa21.18■□□□□ 0.98
TRA2A-211ENST00000538367 TTC14Q96N46 770 aa21.18■□□□□ 0.98
TRA2A-211ENST00000538367 KIF2AO00139 706 aaPredicted RBP21.17■□□□□ 0.98
TRA2A-211ENST00000538367 KIF1BPQ96EK5 621 aa21.17■□□□□ 0.98
TRA2A-211ENST00000538367 MAP2P11137 1827 aaKnown RBP21.17■□□□□ 0.98
TRA2A-211ENST00000538367 FIBPO43427 364 aa21.17■□□□□ 0.98
TRA2A-211ENST00000538367 ZNF75DP51815 510 aa21.17■□□□□ 0.98
TRA2A-211ENST00000538367 THUMPD2Q9BTF0 503 aaKnown RBP21.17■□□□□ 0.98
TRA2A-211ENST00000538367 LIMCH1Q9UPQ0 1083 aa21.17■□□□□ 0.98
TRA2A-211ENST00000538367 SMC3Q9UQE7 1217 aa21.17■□□□□ 0.98
TRA2A-211ENST00000538367 DIP2AQ14689 1571 aa21.16■□□□□ 0.98
TRA2A-211ENST00000538367 ELL2O00472 640 aaPredicted RBP21.16■□□□□ 0.98
TRA2A-211ENST00000538367 SRPK2P78362 688 aaKnown RBP21.16■□□□□ 0.98
TRA2A-211ENST00000538367 RBM43Q6ZSC3 357 aaKnown RBP21.16■□□□□ 0.98
TRA2A-211ENST00000538367 MRVI1Q9Y6F6 885 aa21.16■□□□□ 0.98
TRA2A-211ENST00000538367 ARHGEF10O15013 1369 aa21.16■□□□□ 0.98
TRA2A-211ENST00000538367 RBM6P78332 1123 aaKnown RBP21.16■□□□□ 0.98
TRA2A-211ENST00000538367 TYRO3Q06418 890 aa21.16■□□□□ 0.98
TRA2A-211ENST00000538367 FOXD4L6Q3SYB3 417 aaPredicted RBP21.16■□□□□ 0.98
TRA2A-211ENST00000538367 KMT5BQ4FZB7 885 aa21.16■□□□□ 0.98
TRA2A-211ENST00000538367 TAF7LQ5H9L4 462 aa21.16■□□□□ 0.98
TRA2A-211ENST00000538367 FOXD4L3Q6VB84 417 aaPredicted RBP21.16■□□□□ 0.98
TRA2A-211ENST00000538367 NUP62CLQ9H1M0 184 aa21.16■□□□□ 0.98
TRA2A-211ENST00000538367 POLKQ9UBT6 870 aa21.16■□□□□ 0.98
TRA2A-211ENST00000538367 CHD2O14647 1828 aaKnown RBP21.15■□□□□ 0.98
TRA2A-211ENST00000538367 ADGRL3Q9HAR2 1447 aa21.15■□□□□ 0.98
TRA2A-211ENST00000538367 TPD52L1Q16890 204 aaPredicted RBP21.15■□□□□ 0.98
TRA2A-211ENST00000538367 RTF1Q92541 710 aaKnown RBP21.15■□□□□ 0.98
TRA2A-211ENST00000538367 MEIS3Q99687 375 aa21.15■□□□□ 0.98
TRA2A-211ENST00000538367 UPF3BQ9BZI7 483 aaKnown RBP21.15■□□□□ 0.98
TRA2A-211ENST00000538367 RAD50Q92878 1312 aa21.15■□□□□ 0.98
TRA2A-211ENST00000538367 N4BP2Q86UW6 1770 aaPredicted RBP21.14■□□□□ 0.98
TRA2A-211ENST00000538367 CCT4P50991 539 aaKnown RBP21.14■□□□□ 0.98
TRA2A-211ENST00000538367 NOL8Q76FK4 1167 aaKnown RBP21.14■□□□□ 0.98
TRA2A-211ENST00000538367 PRAM1Q96QH2 718 aa21.14■□□□□ 0.98
TRA2A-211ENST00000538367 LRRCC1Q9C099 1032 aa21.14■□□□□ 0.98
TRA2A-211ENST00000538367 CYP2C19P33261 490 aa21.14■□□□□ 0.97
TRA2A-211ENST00000538367 AATKQ6ZMQ8 1374 aa21.14■□□□□ 0.97
TRA2A-211ENST00000538367 ITSN1Q15811 1721 aa21.14■□□□□ 0.97
TRA2A-211ENST00000538367 NYAP1Q6ZVC0 841 aa21.13■□□□□ 0.97
TRA2A-211ENST00000538367 DDX19AQ9NUU7 478 aaKnown RBP21.13■□□□□ 0.97
TRA2A-211ENST00000538367 IL13P35225 146 aa21.13■□□□□ 0.97
TRA2A-211ENST00000538367 BMS1Q14692 1282 aaKnown RBP21.13■□□□□ 0.97
TRA2A-211ENST00000538367 ZSCAN31Q96LW9 406 aaPredicted RBP21.13■□□□□ 0.97
TRA2A-211ENST00000538367 SH2B1Q9NRF2 756 aaPredicted RBP21.13■□□□□ 0.97
TRA2A-211ENST00000538367 TECPR2O15040 1411 aa21.12■□□□□ 0.97
TRA2A-211ENST00000538367 CPS1P31327 1500 aa21.12■□□□□ 0.97
TRA2A-211ENST00000538367 SAFB2Q14151 953 aaKnown RBP eCLIP21.12■□□□□ 0.971e-8■■□□□ 12.9
TRA2A-211ENST00000538367 SARM1Q6SZW1 724 aa21.12■□□□□ 0.97
TRA2A-211ENST00000538367 ANKLE2Q86XL3 938 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms