RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-215ENST00000537296 ZNF496Q96IT1 587 aaPredicted RBP14.38□□□□□ -0.11
LDHA-215ENST00000537296 UTRNP46939 3433 aa14.37□□□□□ -0.11
LDHA-215ENST00000537296 NFE2L2Q16236 605 aa14.37□□□□□ -0.11
LDHA-215ENST00000537296 RC3H1Q5TC82 1133 aaKnown RBP14.37□□□□□ -0.11
LDHA-215ENST00000537296 ADAMTS8Q9UP79 889 aa14.37□□□□□ -0.11
LDHA-215ENST00000537296 RTCBQ9Y3I0 505 aaKnown RBP14.37□□□□□ -0.11
LDHA-215ENST00000537296 BTBD11A6QL63 1104 aa14.36□□□□□ -0.11
LDHA-215ENST00000537296 RPS6KA4O75676 772 aa14.36□□□□□ -0.11
LDHA-215ENST00000537296 CYP19A1P11511 503 aaPredicted RBP14.36□□□□□ -0.11
LDHA-215ENST00000537296 TTC5Q8N0Z6 440 aa14.36□□□□□ -0.11
LDHA-215ENST00000537296 ARHGEF1Q92888 912 aaKnown RBP14.36□□□□□ -0.11
LDHA-215ENST00000537296 MIS18AQ9NYP9 233 aa14.36□□□□□ -0.11
LDHA-215ENST00000537296 MAPK8IP3Q9UPT6 1336 aa14.36□□□□□ -0.11
LDHA-215ENST00000537296 KDM3BQ7LBC6 1761 aa14.36□□□□□ -0.11
LDHA-215ENST00000537296 HTATSF1O43719 755 aaKnown RBP14.36□□□□□ -0.11
LDHA-215ENST00000537296 NEFMP07197 916 aa14.36□□□□□ -0.11
LDHA-215ENST00000537296 HMGB2P26583 209 aaKnown RBP14.36□□□□□ -0.11
LDHA-215ENST00000537296 SYT17Q9BSW7 474 aa14.36□□□□□ -0.11
LDHA-215ENST00000537296 RRP7AQ9Y3A4 280 aaKnown RBP14.36□□□□□ -0.11
LDHA-215ENST00000537296 HEG1Q9ULI3 1381 aa14.35□□□□□ -0.11
LDHA-215ENST00000537296 PRAMEF22A3QJZ6 481 aa14.35□□□□□ -0.11
LDHA-215ENST00000537296 POLD1P28340 1107 aa14.35□□□□□ -0.11
LDHA-215ENST00000537296 WDR43Q15061 677 aaKnown RBP eCLIP14.35□□□□□ -0.115e-7■□□□□ 10.4
LDHA-215ENST00000537296 TRAPPC3LQ5T215 181 aa14.35□□□□□ -0.11
LDHA-215ENST00000537296 KLHL34Q8N239 644 aa14.35□□□□□ -0.11
LDHA-215ENST00000537296 ZBTB1Q9Y2K1 713 aa14.35□□□□□ -0.11
LDHA-215ENST00000537296 VSIG10Q8N0Z9 540 aa14.34□□□□□ -0.11
LDHA-215ENST00000537296 CCDC87Q9NVE4 849 aa14.34□□□□□ -0.11
LDHA-215ENST00000537296 SRP68Q9UHB9 627 aaKnown RBP14.34□□□□□ -0.11
LDHA-215ENST00000537296 TMPOP42166 694 aaKnown RBP14.33□□□□□ -0.12
LDHA-215ENST00000537296 PNNQ9H307 717 aaKnown RBP14.33□□□□□ -0.12
LDHA-215ENST00000537296 SPDYE4A6NLX3 237 aa14.32□□□□□ -0.12
LDHA-215ENST00000537296 RIPK4P57078 832 aa14.32□□□□□ -0.12
LDHA-215ENST00000537296 NEUROD2Q15784 382 aa14.32□□□□□ -0.12
LDHA-215ENST00000537296 NLGN2Q8NFZ4 835 aa14.32□□□□□ -0.12
LDHA-215ENST00000537296 FMNL2Q96PY5 1086 aa14.32□□□□□ -0.12
LDHA-215ENST00000537296 SOS1Q07889 1333 aaPredicted RBP14.32□□□□□ -0.12
LDHA-215ENST00000537296 GYS1P13807 737 aa14.31□□□□□ -0.12
LDHA-215ENST00000537296 CANXP27824 592 aaKnown RBP14.31□□□□□ -0.12
LDHA-215ENST00000537296 RFC4P35249 363 aa14.31□□□□□ -0.12
LDHA-215ENST00000537296 TAF7Q15545 349 aaPredicted RBP14.31□□□□□ -0.12
LDHA-215ENST00000537296 PIP4K2AP48426 406 aaPredicted RBP14.31□□□□□ -0.12
LDHA-215ENST00000537296 RUNDC1Q96C34 613 aa14.31□□□□□ -0.12
LDHA-215ENST00000537296 USP16Q9Y5T5 823 aa14.31□□□□□ -0.12
LDHA-215ENST00000537296 A1BGP04217 495 aa14.3□□□□□ -0.12
LDHA-215ENST00000537296 MMP10P09238 476 aa14.3□□□□□ -0.12
LDHA-215ENST00000537296 USP42Q9H9J4 1324 aaKnown RBP14.3□□□□□ -0.12
LDHA-215ENST00000537296 COL15A1P39059 1388 aa14.3□□□□□ -0.12
LDHA-215ENST00000537296 LAMB4A4D0S4 1761 aa14.29□□□□□ -0.12
LDHA-215ENST00000537296 SENP3-EIF4A1A0A087X0R7 540 aa14.29□□□□□ -0.12
LDHA-215ENST00000537296 ANP32CO43423 234 aa14.29□□□□□ -0.12
LDHA-215ENST00000537296 TRIM35Q9UPQ4 493 aa14.29□□□□□ -0.12
LDHA-215ENST00000537296 STARD3NLO95772 234 aa14.28□□□□□ -0.12
LDHA-215ENST00000537296 USPL1Q5W0Q7 1092 aa14.28□□□□□ -0.12
LDHA-215ENST00000537296 EIF5P55010 431 aaKnown RBP14.27□□□□□ -0.12
LDHA-215ENST00000537296 KIF13BQ9NQT8 1826 aa14.27□□□□□ -0.13
LDHA-215ENST00000537296 KIAA1551Q9HCM1 1747 aa14.27□□□□□ -0.13
LDHA-215ENST00000537296 SNRPA1P09661 255 aaKnown RBP14.26□□□□□ -0.13
LDHA-215ENST00000537296 NLGN1Q8N2Q7 840 aa14.26□□□□□ -0.13
LDHA-215ENST00000537296 TEX13AQ9BXU3 409 aaPredicted RBP14.26□□□□□ -0.13
LDHA-215ENST00000537296 BCL2L12Q9HB09 334 aa14.26□□□□□ -0.13
LDHA-215ENST00000537296 ZNF330Q9Y3S2 320 aaPredicted RBP14.26□□□□□ -0.13
LDHA-215ENST00000537296 SCN7AQ01118 1682 aa14.26□□□□□ -0.13
LDHA-215ENST00000537296 N4BP2Q86UW6 1770 aaPredicted RBP14.26□□□□□ -0.13
LDHA-215ENST00000537296 APAF1O14727 1248 aa14.25□□□□□ -0.13
LDHA-215ENST00000537296 EIF4A1P60842 406 aaKnown RBP14.25□□□□□ -0.13
LDHA-215ENST00000537296 DDR1Q08345 913 aa14.25□□□□□ -0.13
LDHA-215ENST00000537296 MRS2Q9HD23 443 aa14.25□□□□□ -0.13
LDHA-215ENST00000537296 AFDNP55196 1824 aaKnown RBP14.25□□□□□ -0.13
LDHA-215ENST00000537296 NBPF26B4DH59 902 aa14.25□□□□□ -0.13
LDHA-215ENST00000537296 NBPF10Q6P3W6 841 aaKnown RBP14.25□□□□□ -0.13
LDHA-215ENST00000537296 NBPF15Q8N660 670 aa14.25□□□□□ -0.13
LDHA-215ENST00000537296 PNISRQ8TF01 805 aaKnown RBP14.25□□□□□ -0.13
LDHA-215ENST00000537296 NARFQ9UHQ1 456 aa14.25□□□□□ -0.13
LDHA-215ENST00000537296 TBC1D2BQ9UPU7 963 aa14.25□□□□□ -0.13
LDHA-215ENST00000537296 BCORQ6W2J9 1755 aa14.25□□□□□ -0.13
LDHA-215ENST00000537296 ZPR1O75312 459 aa14.24□□□□□ -0.13
LDHA-215ENST00000537296 GIGYF1O75420 1035 aaPredicted RBP14.24□□□□□ -0.13
LDHA-215ENST00000537296 LMOD3Q0VAK6 560 aa14.24□□□□□ -0.13
LDHA-215ENST00000537296 TSPYL4Q9UJ04 414 aa14.24□□□□□ -0.13
LDHA-215ENST00000537296 WWC3Q9ULE0 1092 aa14.24□□□□□ -0.13
LDHA-215ENST00000537296 IL6STP40189 918 aaPredicted RBP14.23□□□□□ -0.13
LDHA-215ENST00000537296 CD2APQ9Y5K6 639 aa14.23□□□□□ -0.13
LDHA-215ENST00000537296 TM4SF1P30408 202 aa14.22□□□□□ -0.13
LDHA-215ENST00000537296 NFIXQ14938 502 aa14.22□□□□□ -0.13
LDHA-215ENST00000537296 KRT24Q2M2I5 525 aa14.22□□□□□ -0.13
LDHA-215ENST00000537296 PELP1Q8IZL8 1130 aaKnown RBP14.22□□□□□ -0.13
LDHA-215ENST00000537296 LAS1LQ9Y4W2 734 aaKnown RBP14.22□□□□□ -0.13
LDHA-215ENST00000537296 C10orf71Q711Q0 1435 aa14.22□□□□□ -0.13
LDHA-215ENST00000537296 POLRMTO00411 1230 aaKnown RBP14.21□□□□□ -0.13
LDHA-215ENST00000537296 YBX3P16989 372 aaKnown RBP eCLIP14.21□□□□□ -0.131e-29■■□□□ 12.5
LDHA-215ENST00000537296 NRXN2Q9P2S2 1712 aa14.21□□□□□ -0.13
LDHA-215ENST00000537296 PARP3Q9Y6F1 533 aa14.21□□□□□ -0.13
LDHA-215ENST00000537296 PXDNLA1KZ92 1463 aa14.21□□□□□ -0.13
LDHA-215ENST00000537296 CHL1O00533 1208 aa14.2□□□□□ -0.14
LDHA-215ENST00000537296 BICDL1Q6ZP65 573 aa14.2□□□□□ -0.14
LDHA-215ENST00000537296 CAMTA2O94983 1202 aa14.2□□□□□ -0.14
LDHA-215ENST00000537296 GPR162Q16538 588 aa14.2□□□□□ -0.14
LDHA-215ENST00000537296 TBC1D9BQ66K14 1250 aa14.2□□□□□ -0.14
LDHA-215ENST00000537296 DZIP3Q86Y13 1208 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms