RNA–Protein interactions for RNA: ENST00000536144.1

MRE11-206, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 3

Gene MRE11, Length 619 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-206ENST00000536144 LRRC37A3O60309 1634 aa12.08□□□□□ -0.48
MRE11-206ENST00000536144 SULT6B1Q6IMI4 303 aa12.07□□□□□ -0.48
MRE11-206ENST00000536144 DDX54Q8TDD1 881 aaKnown RBP12.07□□□□□ -0.48
MRE11-206ENST00000536144 PRKRIP1Q9H875 184 aaPredicted RBP12.07□□□□□ -0.48
MRE11-206ENST00000536144 EMILIN3Q9NT22 766 aa12.07□□□□□ -0.48
MRE11-206ENST00000536144 NUDCQ9Y266 331 aa12.07□□□□□ -0.48
MRE11-206ENST00000536144 COL3A1P02461 1466 aaPredicted RBP12.07□□□□□ -0.48
MRE11-206ENST00000536144 TRIM37O94972 964 aa12.06□□□□□ -0.48
MRE11-206ENST00000536144 SF3B2Q13435 895 aaKnown RBP12.06□□□□□ -0.48
MRE11-206ENST00000536144 AMOTQ4VCS5 1084 aa12.06□□□□□ -0.48
MRE11-206ENST00000536144 VARS2Q5ST30 1063 aaKnown RBP12.06□□□□□ -0.48
MRE11-206ENST00000536144 AEBP1Q8IUX7 1158 aa12.06□□□□□ -0.48
MRE11-206ENST00000536144 WNK3Q9BYP7 1800 aa12.06□□□□□ -0.48
MRE11-206ENST00000536144 MYBBP1AQ9BQG0 1328 aaKnown RBP12.06□□□□□ -0.48
MRE11-206ENST00000536144 PCDH11XQ9BZA7 1347 aa12.06□□□□□ -0.48
MRE11-206ENST00000536144 PCDH11YQ9BZA8 1340 aa12.06□□□□□ -0.48
MRE11-206ENST00000536144 E2F4Q16254 413 aa12.05□□□□□ -0.48
MRE11-206ENST00000536144 PLEKHO1Q53GL0 409 aaPredicted RBP12.05□□□□□ -0.48
MRE11-206ENST00000536144 LHX6Q9UPM6 363 aa12.05□□□□□ -0.48
MRE11-206ENST00000536144 RGPD2P0DJD1 1756 aa12.05□□□□□ -0.48
MRE11-206ENST00000536144 CYP27B1O15528 508 aa12.04□□□□□ -0.48
MRE11-206ENST00000536144 CAMK2BQ13554 666 aa12.04□□□□□ -0.48
MRE11-206ENST00000536144 CDAN1Q8IWY9 1227 aa12.04□□□□□ -0.48
MRE11-206ENST00000536144 POTEB3A0JP26 581 aa12.03□□□□□ -0.48
MRE11-206ENST00000536144 U2SURPO15042 1029 aaKnown RBP12.03□□□□□ -0.48
MRE11-206ENST00000536144 HMOX1P09601 288 aa12.03□□□□□ -0.48
MRE11-206ENST00000536144 BAG6P46379 1132 aa12.03□□□□□ -0.48
MRE11-206ENST00000536144 POTEBQ6S5H4 581 aa12.03□□□□□ -0.48
MRE11-206ENST00000536144 IFNL2Q8IZJ0 200 aa12.03□□□□□ -0.48
MRE11-206ENST00000536144 RGPD1P0DJD0 1748 aa12.03□□□□□ -0.48
MRE11-206ENST00000536144 FCHSD2O94868 740 aa12.02□□□□□ -0.49
MRE11-206ENST00000536144 PHKG2P15735 406 aa12.02□□□□□ -0.49
MRE11-206ENST00000536144 PLSCR1O15162 318 aa12.01□□□□□ -0.49
MRE11-206ENST00000536144 KCNQ2O43526 872 aa12.01□□□□□ -0.49
MRE11-206ENST00000536144 EVI5O60447 810 aa12.01□□□□□ -0.49
MRE11-206ENST00000536144 APBA3O96018 575 aa12.01□□□□□ -0.49
MRE11-206ENST00000536144 HSP90AB1P08238 724 aaKnown RBP12.01□□□□□ -0.49
MRE11-206ENST00000536144 U2AF1L5P0DN76 240 aaPredicted RBP12.01□□□□□ -0.49
MRE11-206ENST00000536144 U2AF1Q01081 240 aaKnown RBP eCLIP12.01□□□□□ -0.49
MRE11-206ENST00000536144 DPYSL4O14531 572 aa12□□□□□ -0.49
MRE11-206ENST00000536144 PRIM1P49642 420 aaKnown RBP12□□□□□ -0.49
MRE11-206ENST00000536144 PTF1AQ7RTS3 328 aa12□□□□□ -0.49
MRE11-206ENST00000536144 DEFB132Q7Z7B7 95 aa12□□□□□ -0.49
MRE11-206ENST00000536144 CAMKK2Q96RR4 588 aa12□□□□□ -0.49
MRE11-206ENST00000536144 RSPH6AQ9H0K4 717 aa12□□□□□ -0.49
MRE11-206ENST00000536144 ANP32CO43423 234 aa11.99□□□□□ -0.49
MRE11-206ENST00000536144 EN1Q05925 392 aaPredicted RBP11.99□□□□□ -0.49
MRE11-206ENST00000536144 ZNF530Q6P9A1 599 aaPredicted RBP11.99□□□□□ -0.49
MRE11-206ENST00000536144 ACSBG1Q96GR2 724 aa11.99□□□□□ -0.49
MRE11-206ENST00000536144 DCAF5Q96JK2 942 aa11.99□□□□□ -0.49
MRE11-206ENST00000536144 PCDH10Q9P2E7 1040 aa11.99□□□□□ -0.49
MRE11-206ENST00000536144 PKD1L3Q7Z443 1732 aa11.99□□□□□ -0.49
MRE11-206ENST00000536144 MTHFSDQ2M296 383 aaKnown RBP11.98□□□□□ -0.49
MRE11-206ENST00000536144 AKAP4Q5JQC9 854 aa11.98□□□□□ -0.49
MRE11-206ENST00000536144 C1orf141Q5JVX7 400 aa11.98□□□□□ -0.49
MRE11-206ENST00000536144 PNNQ9H307 717 aaKnown RBP11.98□□□□□ -0.49
MRE11-206ENST00000536144 ERVV-2B6SEH9 535 aa11.97□□□□□ -0.49
MRE11-206ENST00000536144 PRKAR2BP31323 418 aa11.97□□□□□ -0.49
MRE11-206ENST00000536144 GAS2L2Q8NHY3 880 aa11.97□□□□□ -0.49
MRE11-206ENST00000536144 SYTL4Q96C24 671 aaPredicted RBP11.97□□□□□ -0.49
MRE11-206ENST00000536144 SHANK3Q9BYB0 1731 aa11.97□□□□□ -0.49
MRE11-206ENST00000536144 EZH2Q15910 746 aaKnown RBP11.96□□□□□ -0.49
MRE11-206ENST00000536144 PHACTR3Q96KR7 559 aa11.96□□□□□ -0.49
MRE11-206ENST00000536144 PSDA5PKW4 1024 aaPredicted RBP11.95□□□□□ -0.5
MRE11-206ENST00000536144 PLEKHF1Q96S99 279 aa11.95□□□□□ -0.5
MRE11-206ENST00000536144 TNS1Q9HBL0 1735 aaKnown RBP11.94□□□□□ -0.5
MRE11-206ENST00000536144 NHSQ6T4R5 1651 aa11.94□□□□□ -0.5
MRE11-206ENST00000536144 NEFMP07197 916 aa11.94□□□□□ -0.5
MRE11-206ENST00000536144 MPRIPQ6WCQ1 1025 aa11.94□□□□□ -0.5
MRE11-206ENST00000536144 ZNF687Q8N1G0 1237 aa11.94□□□□□ -0.5
MRE11-206ENST00000536144 PIGBQ92521 554 aa11.94□□□□□ -0.5
MRE11-206ENST00000536144 ANO8Q9HCE9 1232 aaPredicted RBP11.94□□□□□ -0.5
MRE11-206ENST00000536144 TMOD3Q9NYL9 352 aa11.94□□□□□ -0.5
MRE11-206ENST00000536144 SBF2Q86WG5 1849 aa11.93□□□□□ -0.5
MRE11-206ENST00000536144 GNAT3A8MTJ3 354 aa11.93□□□□□ -0.5
MRE11-206ENST00000536144 WDR43Q15061 677 aaKnown RBP eCLIP11.93□□□□□ -0.5
MRE11-206ENST00000536144 TXNRD1Q16881 649 aa11.93□□□□□ -0.5
MRE11-206ENST00000536144 SMARCC1Q92922 1105 aaPredicted RBP11.93□□□□□ -0.5
MRE11-206ENST00000536144 KDM6AO15550 1401 aaPredicted RBP11.93□□□□□ -0.5
MRE11-206ENST00000536144 RNMTO43148 476 aaKnown RBP11.92□□□□□ -0.5
MRE11-206ENST00000536144 HTATSF1O43719 755 aaKnown RBP11.92□□□□□ -0.5
MRE11-206ENST00000536144 HMGB2P26583 209 aaKnown RBP11.92□□□□□ -0.5
MRE11-206ENST00000536144 CABP4P57796 275 aa11.92□□□□□ -0.5
MRE11-206ENST00000536144 SLC27A3Q5K4L6 730 aa11.92□□□□□ -0.5
MRE11-206ENST00000536144 PPP4R3BQ5MIZ7 849 aa11.92□□□□□ -0.5
MRE11-206ENST00000536144 ZNF454Q8N9F8 522 aa11.92□□□□□ -0.5
MRE11-206ENST00000536144 LGR6Q9HBX8 967 aa11.92□□□□□ -0.5
MRE11-206ENST00000536144 ADAMTS8Q9UP79 889 aa11.92□□□□□ -0.5
MRE11-206ENST00000536144 MAP3K5Q99683 1374 aa11.92□□□□□ -0.5
MRE11-206ENST00000536144 NFATC2IPQ8NCF5 419 aa11.91□□□□□ -0.5
MRE11-206ENST00000536144 IL17REQ8NFR9 667 aa11.91□□□□□ -0.5
MRE11-206ENST00000536144 CCDC184Q52MB2 194 aa11.9□□□□□ -0.5
MRE11-206ENST00000536144 VSIG10Q8N0Z9 540 aa11.9□□□□□ -0.5
MRE11-206ENST00000536144 SLC52A2Q9HAB3 445 aa11.9□□□□□ -0.5
MRE11-206ENST00000536144 MAPK8IP3Q9UPT6 1336 aa11.89□□□□□ -0.51
MRE11-206ENST00000536144 NFE2L2Q16236 605 aa11.89□□□□□ -0.51
MRE11-206ENST00000536144 NBPF14Q5TI25 921 aa11.89□□□□□ -0.51
MRE11-206ENST00000536144 PNISRQ8TF01 805 aaKnown RBP11.89□□□□□ -0.51
MRE11-206ENST00000536144 RTF1Q92541 710 aaKnown RBP11.89□□□□□ -0.51
MRE11-206ENST00000536144 RUNDC1Q96C34 613 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms