RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 ZIC2O95409 532 aaPredicted RBP9.02□□□□□ -0.97
USP28-202ENST00000535607 NR3C2P08235 984 aa9.02□□□□□ -0.97
USP28-202ENST00000535607 SCTRP47872 440 aa9.02□□□□□ -0.97
USP28-202ENST00000535607 TMEM164Q5U3C3 297 aa9.02□□□□□ -0.97
USP28-202ENST00000535607 STK32AQ8WU08 396 aa9.02□□□□□ -0.97
USP28-202ENST00000535607 PDZRN3Q9UPQ7 1066 aa9.02□□□□□ -0.97
USP28-202ENST00000535607 TROQ12816 1431 aaPredicted RBP9.02□□□□□ -0.97
USP28-202ENST00000535607 MTUS2Q5JR59 1369 aa9.01□□□□□ -0.97
USP28-202ENST00000535607 J3QL48 77 aa9.01□□□□□ -0.97
USP28-202ENST00000535607 UPP2O95045 317 aa9.01□□□□□ -0.97
USP28-202ENST00000535607 GNRH1P01148 92 aa9.01□□□□□ -0.97
USP28-202ENST00000535607 PRR20EP86478 221 aa9.01□□□□□ -0.97
USP28-202ENST00000535607 PRR20CP86479 221 aa9.01□□□□□ -0.97
USP28-202ENST00000535607 PRR20DP86480 221 aa9.01□□□□□ -0.97
USP28-202ENST00000535607 PRR20BP86481 221 aa9.01□□□□□ -0.97
USP28-202ENST00000535607 PRR20AP86496 221 aa9.01□□□□□ -0.97
USP28-202ENST00000535607 SWI5Q1ZZU3 235 aa9.01□□□□□ -0.97
USP28-202ENST00000535607 ZMIZ1Q9ULJ6 1067 aa9.01□□□□□ -0.97
USP28-202ENST00000535607 MAGI3Q5TCQ9 1506 aa9□□□□□ -0.97
USP28-202ENST00000535607 RRBP1Q9P2E9 1410 aaKnown RBP9□□□□□ -0.97
USP28-202ENST00000535607 ANP32CO43423 234 aa9□□□□□ -0.97
USP28-202ENST00000535607 BRD1O95696 1058 aa9□□□□□ -0.97
USP28-202ENST00000535607 GTF2E1P29083 439 aaPredicted RBP9□□□□□ -0.97
USP28-202ENST00000535607 PCDHGA11Q9Y5H2 935 aa9□□□□□ -0.97
USP28-202ENST00000535607 WDR7Q9Y4E6 1490 aa9□□□□□ -0.97
USP28-202ENST00000535607 ITSN2Q9NZM3 1697 aa9□□□□□ -0.97
USP28-202ENST00000535607 ADH1AP07327 375 aa8.99□□□□□ -0.97
USP28-202ENST00000535607 GDF10P55107 478 aa8.99□□□□□ -0.97
USP28-202ENST00000535607 NLRP3Q96P20 1036 aa8.99□□□□□ -0.97
USP28-202ENST00000535607 OSBPL3Q9H4L5 887 aa8.99□□□□□ -0.97
USP28-202ENST00000535607 TOR4AQ9NXH8 423 aa8.99□□□□□ -0.97
USP28-202ENST00000535607 MTMR7Q9Y216 660 aa8.99□□□□□ -0.97
USP28-202ENST00000535607 SFI1A8K8P3 1242 aa8.98□□□□□ -0.97
USP28-202ENST00000535607 ITPKCQ96DU7 683 aa8.98□□□□□ -0.97
USP28-202ENST00000535607 KIAA1024Q9UPX6 916 aa8.98□□□□□ -0.97
USP28-202ENST00000535607 NCOA2Q15596 1464 aa8.97□□□□□ -0.97
USP28-202ENST00000535607 ARAP3Q8WWN8 1544 aa8.97□□□□□ -0.97
USP28-202ENST00000535607 ZBTB7BO15156 539 aaPredicted RBP8.97□□□□□ -0.97
USP28-202ENST00000535607 LILRA1O75019 489 aa8.97□□□□□ -0.97
USP28-202ENST00000535607 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.97□□□□□ -0.97
USP28-202ENST00000535607 CHMP3Q9Y3E7 222 aa8.97□□□□□ -0.97
USP28-202ENST00000535607 FAM187AA6NFU0 413 aa8.96□□□□□ -0.98
USP28-202ENST00000535607 TMEM88BA6NKF7 163 aa8.96□□□□□ -0.98
USP28-202ENST00000535607 M0R2N6 131 aa8.96□□□□□ -0.98
USP28-202ENST00000535607 SMPD1P17405 629 aa8.96□□□□□ -0.98
USP28-202ENST00000535607 KCNA1Q09470 495 aa8.96□□□□□ -0.98
USP28-202ENST00000535607 VTI1AQ96AJ9 217 aa8.96□□□□□ -0.98
USP28-202ENST00000535607 ARHGEF10LQ9HCE6 1279 aa8.96□□□□□ -0.98
USP28-202ENST00000535607 SERTAD1Q9UHV2 236 aa8.96□□□□□ -0.98
USP28-202ENST00000535607 ABCA9Q8IUA7 1624 aa8.95□□□□□ -0.98
USP28-202ENST00000535607 MEN1O00255 615 aa8.95□□□□□ -0.98
USP28-202ENST00000535607 CAPN5O15484 640 aaPredicted RBP8.95□□□□□ -0.98
USP28-202ENST00000535607 INHAP05111 366 aa8.95□□□□□ -0.98
USP28-202ENST00000535607 ATP2B4P23634 1241 aa8.95□□□□□ -0.98
USP28-202ENST00000535607 RELBQ01201 579 aa8.95□□□□□ -0.98
USP28-202ENST00000535607 CLP1Q92989 425 aaKnown RBP8.95□□□□□ -0.98
USP28-202ENST00000535607 ZFAND3Q9H8U3 227 aa8.95□□□□□ -0.98
USP28-202ENST00000535607 RAB6BQ9NRW1 208 aa8.95□□□□□ -0.98
USP28-202ENST00000535607 ZNF358Q9NW07 568 aa8.95□□□□□ -0.98
USP28-202ENST00000535607 CCNB3Q8WWL7 1395 aa8.95□□□□□ -0.98
USP28-202ENST00000535607 MYOM3Q5VTT5 1437 aa8.95□□□□□ -0.98
USP28-202ENST00000535607 ASXL2Q76L83 1435 aa8.95□□□□□ -0.98
USP28-202ENST00000535607 ABCC10Q5T3U5 1492 aa8.95□□□□□ -0.98
USP28-202ENST00000535607 PREX2Q70Z35 1606 aa8.94□□□□□ -0.98
USP28-202ENST00000535607 CARNS1A5YM72 827 aa8.94□□□□□ -0.98
USP28-202ENST00000535607 PLEKHD1A6NEE1 506 aa8.94□□□□□ -0.98
USP28-202ENST00000535607 PRMT3O60678 531 aa8.94□□□□□ -0.98
USP28-202ENST00000535607 TIMP2P16035 220 aa8.94□□□□□ -0.98
USP28-202ENST00000535607 ADD1P35611 737 aaKnown RBP8.94□□□□□ -0.98
USP28-202ENST00000535607 CBLBQ13191 982 aa8.94□□□□□ -0.98
USP28-202ENST00000535607 PKDCCQ504Y2 493 aa8.94□□□□□ -0.98
USP28-202ENST00000535607 TSEN2Q8NCE0 465 aaKnown RBP8.94□□□□□ -0.98
USP28-202ENST00000535607 TSEN34Q9BSV6 310 aaKnown RBP8.94□□□□□ -0.98
USP28-202ENST00000535607 MIA2Q96PC5 1412 aa8.94□□□□□ -0.98
USP28-202ENST00000535607 MYO5CQ9NQX4 1742 aa8.94□□□□□ -0.98
USP28-202ENST00000535607 WASLO00401 505 aaPredicted RBP8.93□□□□□ -0.98
USP28-202ENST00000535607 PTGIRP43119 386 aa8.93□□□□□ -0.98
USP28-202ENST00000535607 TLR1Q15399 786 aa8.93□□□□□ -0.98
USP28-202ENST00000535607 NBPF15Q8N660 670 aa8.93□□□□□ -0.98
USP28-202ENST00000535607 HPS1Q92902 700 aa8.93□□□□□ -0.98
USP28-202ENST00000535607 ETNK1Q9HBU6 452 aa8.93□□□□□ -0.98
USP28-202ENST00000535607 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.93□□□□□ -0.98
USP28-202ENST00000535607 GLI2P10070 1586 aa8.93□□□□□ -0.98
USP28-202ENST00000535607 TTC37Q6PGP7 1564 aa8.93□□□□□ -0.98
USP28-202ENST00000535607 CDC42BPAQ5VT25 1732 aa8.92□□□□□ -0.98
USP28-202ENST00000535607 CFAP74Q9C0B2 1584 aa8.92□□□□□ -0.98
USP28-202ENST00000535607 FGD6Q6ZV73 1430 aa8.92□□□□□ -0.98
USP28-202ENST00000535607 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.92□□□□□ -0.98
USP28-202ENST00000535607 TRIM67Q6ZTA4 783 aa8.92□□□□□ -0.98
USP28-202ENST00000535607 Q6ZVU0 165 aa8.92□□□□□ -0.98
USP28-202ENST00000535607 CNKSR1Q969H4 720 aa8.92□□□□□ -0.98
USP28-202ENST00000535607 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.92□□□□□ -0.98
USP28-202ENST00000535607 DIP2BQ9P265 1576 aa8.91□□□□□ -0.98
USP28-202ENST00000535607 PHLDB1Q86UU1 1377 aa8.91□□□□□ -0.98
USP28-202ENST00000535607 A0A1W2PRU2 124 aa8.91□□□□□ -0.98
USP28-202ENST00000535607 TMEM229AB2RXF0 380 aa8.91□□□□□ -0.98
USP28-202ENST00000535607 GFRA3O60609 400 aa8.91□□□□□ -0.98
USP28-202ENST00000535607 SCNN1DP51172 638 aa8.91□□□□□ -0.98
USP28-202ENST00000535607 CLN3Q13286 438 aa8.91□□□□□ -0.98
USP28-202ENST00000535607 SCARF1Q14162 830 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms