RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 ARHGEF1Q92888 912 aaKnown RBP28.58■■■□□ 2.17
SSPN-204ENST00000535504 MIS18AQ9NYP9 233 aa28.58■■■□□ 2.17
SSPN-204ENST00000535504 A0A087WZG4 1122 aa28.57■■■□□ 2.16
SSPN-204ENST00000535504 ZPR1O75312 459 aa28.57■■■□□ 2.16
SSPN-204ENST00000535504 INTS5Q6P9B9 1019 aaKnown RBP28.57■■■□□ 2.16
SSPN-204ENST00000535504 MYH14Q7Z406 1995 aaKnown RBP28.57■■■□□ 2.16
SSPN-204ENST00000535504 DCAF8L1A6NGE4 600 aa28.56■■■□□ 2.16
SSPN-204ENST00000535504 CANXP27824 592 aaKnown RBP28.56■■■□□ 2.16
SSPN-204ENST00000535504 KLHL34Q8N239 644 aa28.56■■■□□ 2.16
SSPN-204ENST00000535504 SMIM5Q71RC9 77 aa28.55■■■□□ 2.16
SSPN-204ENST00000535504 AMIGO3Q86WK7 504 aa28.55■■■□□ 2.16
SSPN-204ENST00000535504 NLGN1Q8N2Q7 840 aa28.55■■■□□ 2.16
SSPN-204ENST00000535504 ZBTB1Q9Y2K1 713 aa28.55■■■□□ 2.16
SSPN-204ENST00000535504 LAS1LQ9Y4W2 734 aaKnown RBP28.55■■■□□ 2.16
SSPN-204ENST00000535504 SOS1Q07889 1333 aaPredicted RBP28.54■■■□□ 2.16
SSPN-204ENST00000535504 ZNF330Q9Y3S2 320 aaPredicted RBP28.54■■■□□ 2.16
SSPN-204ENST00000535504 COL15A1P39059 1388 aa28.53■■■□□ 2.16
SSPN-204ENST00000535504 FAM9BQ8IZU0 186 aa28.53■■■□□ 2.16
SSPN-204ENST00000535504 SGIP1Q9BQI5 828 aa28.53■■■□□ 2.16
SSPN-204ENST00000535504 TRIM35Q9UPQ4 493 aa28.52■■■□□ 2.16
SSPN-204ENST00000535504 KDM3BQ7LBC6 1761 aa28.52■■■□□ 2.16
SSPN-204ENST00000535504 EIF4A1P60842 406 aaKnown RBP28.5■■■□□ 2.15
SSPN-204ENST00000535504 IL6STP40189 918 aaPredicted RBP28.49■■■□□ 2.15
SSPN-204ENST00000535504 FHDC1Q9C0D6 1143 aaPredicted RBP28.49■■■□□ 2.15
SSPN-204ENST00000535504 USP42Q9H9J4 1324 aaKnown RBP28.48■■■□□ 2.15
SSPN-204ENST00000535504 USP16Q9Y5T5 823 aa28.48■■■□□ 2.15
SSPN-204ENST00000535504 COL24A1Q17RW2 1714 aa28.48■■■□□ 2.15
SSPN-204ENST00000535504 SRCAPQ6ZRS2 3230 aa28.47■■■□□ 2.15
SSPN-204ENST00000535504 GIGYF1O75420 1035 aaPredicted RBP28.46■■■□□ 2.15
SSPN-204ENST00000535504 A1BGP04217 495 aa28.46■■■□□ 2.15
SSPN-204ENST00000535504 GNAI1P63096 354 aa28.46■■■□□ 2.15
SSPN-204ENST00000535504 DIEXFQ68CQ4 756 aaKnown RBP28.46■■■□□ 2.15
SSPN-204ENST00000535504 CFAP44Q96MT7 982 aa28.46■■■□□ 2.15
SSPN-204ENST00000535504 NARFQ9UHQ1 456 aa28.46■■■□□ 2.15
SSPN-204ENST00000535504 PARP3Q9Y6F1 533 aa28.46■■■□□ 2.15
SSPN-204ENST00000535504 C4AP0C0L4 1744 aa28.46■■■□□ 2.15
SSPN-204ENST00000535504 MMP10P09238 476 aa28.45■■■□□ 2.14
SSPN-204ENST00000535504 GYS1P13807 737 aa28.45■■■□□ 2.14
SSPN-204ENST00000535504 EIF5P55010 431 aaKnown RBP28.45■■■□□ 2.14
SSPN-204ENST00000535504 CHL1O00533 1208 aa28.44■■■□□ 2.14
SSPN-204ENST00000535504 USPL1Q5W0Q7 1092 aa28.44■■■□□ 2.14
SSPN-204ENST00000535504 SRP68Q9UHB9 627 aaKnown RBP28.44■■■□□ 2.14
SSPN-204ENST00000535504 LAMB4A4D0S4 1761 aa28.44■■■□□ 2.14
SSPN-204ENST00000535504 PRAMEF22A3QJZ6 481 aa28.43■■■□□ 2.14
SSPN-204ENST00000535504 CCER2I3L3R5 266 aa28.43■■■□□ 2.14
SSPN-204ENST00000535504 CCDC27Q2M243 656 aa28.43■■■□□ 2.14
SSPN-204ENST00000535504 SYT17Q9BSW7 474 aa28.43■■■□□ 2.14
SSPN-204ENST00000535504 IFT57Q9NWB7 429 aa28.43■■■□□ 2.14
SSPN-204ENST00000535504 NCBP3Q53F19 620 aaKnown RBP28.42■■■□□ 2.14
SSPN-204ENST00000535504 NGEFQ8N5V2 710 aa28.41■■■□□ 2.14
SSPN-204ENST00000535504 DZIP3Q86Y13 1208 aaKnown RBP28.39■■■□□ 2.14
SSPN-204ENST00000535504 ZNF652Q9Y2D9 606 aa28.39■■■□□ 2.14
SSPN-204ENST00000535504 CD2APQ9Y5K6 639 aa28.39■■■□□ 2.14
SSPN-204ENST00000535504 ERBB4Q15303 1308 aa28.39■■■□□ 2.13
SSPN-204ENST00000535504 EIF2S2P20042 333 aaKnown RBP28.38■■■□□ 2.13
SSPN-204ENST00000535504 CHMP4AQ9BY43 222 aa28.38■■■□□ 2.13
SSPN-204ENST00000535504 TBC1D2BQ9UPU7 963 aa28.38■■■□□ 2.13
SSPN-204ENST00000535504 FKBP8Q14318 412 aa28.37■■■□□ 2.13
SSPN-204ENST00000535504 PIP4K2AP48426 406 aaPredicted RBP28.36■■■□□ 2.13
SSPN-204ENST00000535504 MBIPQ9NS73 344 aa28.36■■■□□ 2.13
SSPN-204ENST00000535504 SALL2Q9Y467 1007 aaPredicted RBP28.36■■■□□ 2.13
SSPN-204ENST00000535504 HOXB7P09629 217 aa28.35■■■□□ 2.13
SSPN-204ENST00000535504 KIF6Q6ZMV9 814 aa28.35■■■□□ 2.13
SSPN-204ENST00000535504 WWC1Q8IX03 1113 aa28.35■■■□□ 2.13
SSPN-204ENST00000535504 SENP3-EIF4A1A0A087X0R7 540 aa28.33■■■□□ 2.13
SSPN-204ENST00000535504 NPHP1O15259 732 aa28.33■■■□□ 2.13
SSPN-204ENST00000535504 MYL6BP14649 208 aa28.33■■■□□ 2.13
SSPN-204ENST00000535504 ZNF853P0CG23 659 aa28.32■■■□□ 2.12
SSPN-204ENST00000535504 IL16Q14005 1332 aa28.32■■■□□ 2.12
SSPN-204ENST00000535504 NBPF26B4DH59 902 aa28.31■■■□□ 2.12
SSPN-204ENST00000535504 NBPF10Q6P3W6 841 aaKnown RBP28.31■■■□□ 2.12
SSPN-204ENST00000535504 BICDL1Q6ZP65 573 aa28.31■■■□□ 2.12
SSPN-204ENST00000535504 NBPF15Q8N660 670 aa28.31■■■□□ 2.12
SSPN-204ENST00000535504 HDGFL1Q5TGJ6 251 aa28.3■■■□□ 2.12
SSPN-204ENST00000535504 WDR63Q8IWG1 891 aa28.3■■■□□ 2.12
SSPN-204ENST00000535504 SCN7AQ01118 1682 aa28.29■■■□□ 2.12
SSPN-204ENST00000535504 NFIXQ14938 502 aa28.29■■■□□ 2.12
SSPN-204ENST00000535504 DUSP27Q5VZP5 1158 aa28.29■■■□□ 2.12
SSPN-204ENST00000535504 CLEC4GQ6UXB4 293 aa28.29■■■□□ 2.12
SSPN-204ENST00000535504 PELP1Q8IZL8 1130 aaKnown RBP28.29■■■□□ 2.12
SSPN-204ENST00000535504 SETDB2Q96T68 719 aa28.29■■■□□ 2.12
SSPN-204ENST00000535504 RGL2O15211 777 aa28.28■■■□□ 2.12
SSPN-204ENST00000535504 CAMTA2O94983 1202 aa28.28■■■□□ 2.12
SSPN-204ENST00000535504 TM4SF1P30408 202 aa28.28■■■□□ 2.12
SSPN-204ENST00000535504 NECTIN2Q92692 538 aa28.28■■■□□ 2.12
SSPN-204ENST00000535504 GPR162Q16538 588 aa28.27■■■□□ 2.12
SSPN-204ENST00000535504 POLRMTO00411 1230 aaKnown RBP28.26■■■□□ 2.11
SSPN-204ENST00000535504 NLGN2Q8NFZ4 835 aa28.26■■■□□ 2.11
SSPN-204ENST00000535504 BCL2L12Q9HB09 334 aa28.26■■■□□ 2.11
SSPN-204ENST00000535504 CARMIL3Q8ND23 1372 aa28.25■■■□□ 2.11
SSPN-204ENST00000535504 SERPINB2P05120 415 aa28.25■■■□□ 2.11
SSPN-204ENST00000535504 TGFB2P61812 414 aa28.25■■■□□ 2.11
SSPN-204ENST00000535504 DDR1Q08345 913 aa28.25■■■□□ 2.11
SSPN-204ENST00000535504 KRT24Q2M2I5 525 aa28.25■■■□□ 2.11
SSPN-204ENST00000535504 DBF4Q9UBU7 674 aaPredicted RBP28.25■■■□□ 2.11
SSPN-204ENST00000535504 ERVV-1B6SEH8 477 aa28.24■■■□□ 2.11
SSPN-204ENST00000535504 TBC1D9BQ66K14 1250 aa28.24■■■□□ 2.11
SSPN-204ENST00000535504 MYH16Q9H6N6 1097 aa28.24■■■□□ 2.11
SSPN-204ENST00000535504 DDX21Q9NR30 783 aaKnown RBP eCLIP28.24■■■□□ 2.11
SSPN-204ENST00000535504 BCORQ6W2J9 1755 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms